RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 DEFB115Q30KQ5 88 aa16.72■□□□□ 0.27
SKA2-205ENST00000580541 FASTKD5Q7L8L6 764 aaKnown RBP16.72■□□□□ 0.27
SKA2-205ENST00000580541 SGMS1Q86VZ5 419 aa16.72■□□□□ 0.27
SKA2-205ENST00000580541 LPAR1Q92633 364 aa16.72■□□□□ 0.27
SKA2-205ENST00000580541 KIF2CQ99661 725 aa16.72■□□□□ 0.27
SKA2-205ENST00000580541 TMEM47Q9BQJ4 181 aa16.72■□□□□ 0.27
SKA2-205ENST00000580541 TRIM75PA6NK02 468 aa16.71■□□□□ 0.27
SKA2-205ENST00000580541 CPA1P15085 419 aa16.71■□□□□ 0.27
SKA2-205ENST00000580541 INHBEP58166 350 aa16.71■□□□□ 0.27
SKA2-205ENST00000580541 RCSD1Q6JBY9 416 aa16.71■□□□□ 0.27
SKA2-205ENST00000580541 REM2Q8IYK8 340 aaPredicted RBP16.71■□□□□ 0.27
SKA2-205ENST00000580541 PNMA1Q8ND90 353 aa16.71■□□□□ 0.27
SKA2-205ENST00000580541 GMCL1P1Q8NEA9 526 aa16.71■□□□□ 0.27
SKA2-205ENST00000580541 BRF1Q92994 677 aa16.71■□□□□ 0.27
SKA2-205ENST00000580541 WNK4Q96J92 1243 aa16.71■□□□□ 0.27
SKA2-205ENST00000580541 MAP3K14Q99558 947 aa16.71■□□□□ 0.27
SKA2-205ENST00000580541 LRRC2Q9BYS8 371 aa16.71■□□□□ 0.27
SKA2-205ENST00000580541 AGXT2Q9BYV1 514 aa16.71■□□□□ 0.27
SKA2-205ENST00000580541 LY9Q9HBG7 655 aa16.71■□□□□ 0.27
SKA2-205ENST00000580541 CCDC196A0A1B0GTZ2 297 aa16.7■□□□□ 0.26
SKA2-205ENST00000580541 IRF6O14896 467 aa16.7■□□□□ 0.26
SKA2-205ENST00000580541 RAD21O60216 631 aa16.7■□□□□ 0.26
SKA2-205ENST00000580541 CETPP11597 493 aa16.7■□□□□ 0.26
SKA2-205ENST00000580541 KIF5BP33176 963 aa16.7■□□□□ 0.26
SKA2-205ENST00000580541 RCAN1P53805 252 aa16.7■□□□□ 0.26
SKA2-205ENST00000580541 SPRYD7Q5W111 196 aa16.7■□□□□ 0.26
SKA2-205ENST00000580541 PAXIP1Q6ZW49 1069 aaPredicted RBP16.7■□□□□ 0.26
SKA2-205ENST00000580541 SIAH1Q8IUQ4 282 aa16.7■□□□□ 0.26
SKA2-205ENST00000580541 ZNF274Q96GC6 653 aaPredicted RBP16.7■□□□□ 0.26
SKA2-205ENST00000580541 ZSCAN31Q96LW9 406 aaPredicted RBP16.7■□□□□ 0.26
SKA2-205ENST00000580541 TCEANC2Q96MN5 208 aa16.7■□□□□ 0.26
SKA2-205ENST00000580541 VCPKMTQ9H867 229 aa16.7■□□□□ 0.26
SKA2-205ENST00000580541 NAP1L2Q9ULW6 460 aaPredicted RBP16.7■□□□□ 0.26
SKA2-205ENST00000580541 KCNH4Q9UQ05 1017 aa16.7■□□□□ 0.26
SKA2-205ENST00000580541 GREB1LQ9C091 1923 aaPredicted RBP16.69■□□□□ 0.26
SKA2-205ENST00000580541 MYH4Q9Y623 1939 aa16.69■□□□□ 0.26
SKA2-205ENST00000580541 MANSC4A6NHS7 340 aaPredicted RBP16.69■□□□□ 0.26
SKA2-205ENST00000580541 RASSF10A6NK89 507 aa16.69■□□□□ 0.26
SKA2-205ENST00000580541 F5H6K3 240 aa16.69■□□□□ 0.26
SKA2-205ENST00000580541 DDAH1O94760 285 aa16.69■□□□□ 0.26
SKA2-205ENST00000580541 C1QTNF8P60827 252 aa16.69■□□□□ 0.26
SKA2-205ENST00000580541 KLRC3Q07444 240 aa16.69■□□□□ 0.26
SKA2-205ENST00000580541 PABPC4Q13310 644 aaKnown RBP eCLIP16.69■□□□□ 0.26
SKA2-205ENST00000580541 MTMR2Q13614 643 aa16.69■□□□□ 0.26
SKA2-205ENST00000580541 SHROOM1Q2M3G4 852 aaPredicted RBP16.69■□□□□ 0.26
SKA2-205ENST00000580541 SH3D19Q5HYK7 790 aa16.69■□□□□ 0.26
SKA2-205ENST00000580541 SLFN13Q68D06 897 aa16.69■□□□□ 0.26
SKA2-205ENST00000580541 PROCA1Q8NCQ7 364 aaPredicted RBP16.69■□□□□ 0.26
SKA2-205ENST00000580541 CTCFLQ8NI51 663 aaPredicted RBP16.69■□□□□ 0.26
SKA2-205ENST00000580541 ACER1Q8TDN7 264 aa16.69■□□□□ 0.26
SKA2-205ENST00000580541 DCAF4Q8WV16 495 aa16.69■□□□□ 0.26
SKA2-205ENST00000580541 LIMCH1Q9UPQ0 1083 aa16.69■□□□□ 0.26
SKA2-205ENST00000580541 KLF18A0A0U1RQI7 1052 aa16.68■□□□□ 0.26
SKA2-205ENST00000580541 A0A1W2PRG0 241 aa16.68■□□□□ 0.26
SKA2-205ENST00000580541 ZBTB43O43298 467 aa16.68■□□□□ 0.26
SKA2-205ENST00000580541 DHX16O60231 1041 aaKnown RBP16.68■□□□□ 0.26
SKA2-205ENST00000580541 SLC10A3P09131 477 aa16.68■□□□□ 0.26
SKA2-205ENST00000580541 SLC1A4P43007 532 aa16.68■□□□□ 0.26
SKA2-205ENST00000580541 GNAQP50148 359 aa16.68■□□□□ 0.26
SKA2-205ENST00000580541 AK2P54819 239 aa16.68■□□□□ 0.26
SKA2-205ENST00000580541 EVCP57679 992 aa16.68■□□□□ 0.26
SKA2-205ENST00000580541 GPATCH4Q5T3I0 446 aaKnown RBP16.68■□□□□ 0.26
SKA2-205ENST00000580541 OTUD7BQ6GQQ9 843 aa16.68■□□□□ 0.26
SKA2-205ENST00000580541 ZNF654Q8IZM8 581 aa16.68■□□□□ 0.26
SKA2-205ENST00000580541 LRRC47Q8N1G4 583 aaKnown RBP16.68■□□□□ 0.26
SKA2-205ENST00000580541 NKX2-3Q8TAU0 364 aa16.68■□□□□ 0.26
SKA2-205ENST00000580541 GMCL1Q96IK5 515 aa16.68■□□□□ 0.26
SKA2-205ENST00000580541 A0A0G2JLL6 359 aaPredicted RBP16.67■□□□□ 0.26
SKA2-205ENST00000580541 WDR46O15213 610 aaKnown RBP16.67■□□□□ 0.26
SKA2-205ENST00000580541 PARP1P09874 1014 aaKnown RBP16.67■□□□□ 0.26
SKA2-205ENST00000580541 HMGCS2P54868 508 aa16.67■□□□□ 0.26
SKA2-205ENST00000580541 SREBF2Q12772 1141 aa16.67■□□□□ 0.26
SKA2-205ENST00000580541 NOGQ13253 232 aa16.67■□□□□ 0.26
SKA2-205ENST00000580541 TOB2Q14106 344 aaPredicted RBP16.67■□□□□ 0.26
SKA2-205ENST00000580541 ZYXQ15942 572 aaKnown RBP16.67■□□□□ 0.26
SKA2-205ENST00000580541 ASPRV1Q53RT3 343 aa16.67■□□□□ 0.26
SKA2-205ENST00000580541 PRRT2Q7Z6L0 340 aaPredicted RBP16.67■□□□□ 0.26
SKA2-205ENST00000580541 CCDC84Q86UT8 332 aaPredicted RBP16.67■□□□□ 0.26
SKA2-205ENST00000580541 RASAL3Q86YV0 1011 aa16.67■□□□□ 0.26
SKA2-205ENST00000580541 CLEC10AQ8IUN9 316 aa16.67■□□□□ 0.26
SKA2-205ENST00000580541 CHURC1Q8WUH1 139 aa16.67■□□□□ 0.26
SKA2-205ENST00000580541 NUP133Q8WUM0 1156 aa16.67■□□□□ 0.26
SKA2-205ENST00000580541 C12orf42Q96LP6 360 aa16.67■□□□□ 0.26
SKA2-205ENST00000580541 LZTS2Q9BRK4 669 aa16.67■□□□□ 0.26
SKA2-205ENST00000580541 SH2B1Q9NRF2 756 aaPredicted RBP16.67■□□□□ 0.26
SKA2-205ENST00000580541 RBM28Q9NW13 759 aaKnown RBP16.67■□□□□ 0.26
SKA2-205ENST00000580541 OTOFQ9HC10 1997 aa16.67■□□□□ 0.26
SKA2-205ENST00000580541 BMP3P12645 472 aa16.66■□□□□ 0.26
SKA2-205ENST00000580541 HSPA6P17066 643 aa16.66■□□□□ 0.26
SKA2-205ENST00000580541 APOBRQ0VD83 1088 aa16.66■□□□□ 0.26
SKA2-205ENST00000580541 CPLX2Q6PUV4 134 aaKnown RBP16.66■□□□□ 0.26
SKA2-205ENST00000580541 APOA5Q6Q788 366 aa16.66■□□□□ 0.26
SKA2-205ENST00000580541 GADL1Q6ZQY3 521 aa16.66■□□□□ 0.26
SKA2-205ENST00000580541 FANCBQ8NB91 859 aa16.66■□□□□ 0.26
SKA2-205ENST00000580541 SLKQ9H2G2 1235 aaPredicted RBP16.66■□□□□ 0.26
SKA2-205ENST00000580541 EMILIN3Q9NT22 766 aa16.66■□□□□ 0.26
SKA2-205ENST00000580541 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.66■□□□□ 0.26
SKA2-205ENST00000580541 ISY1Q9ULR0 285 aaKnown RBP16.66■□□□□ 0.26
SKA2-205ENST00000580541 USP17L15C9J2P7 530 aa16.65■□□□□ 0.26
SKA2-205ENST00000580541 USP17L13C9JLJ4 530 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms