RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 UMODL1Q5DID0 1318 aa17.51■□□□□ 0.39
CSNK1D-213ENST00000580446 SPDYE16A6NNV3 312 aaPredicted RBP17.51■□□□□ 0.39
CSNK1D-213ENST00000580446 EYA2O00167 538 aa17.51■□□□□ 0.39
CSNK1D-213ENST00000580446 ACLYP53396 1101 aa17.51■□□□□ 0.39
CSNK1D-213ENST00000580446 CCDC174Q6PII3 467 aa17.51■□□□□ 0.39
CSNK1D-213ENST00000580446 ATG9AQ7Z3C6 839 aa17.51■□□□□ 0.39
CSNK1D-213ENST00000580446 TEX11Q8IYF3 940 aa17.51■□□□□ 0.39
CSNK1D-213ENST00000580446 SH3RF3Q8TEJ3 882 aaPredicted RBP17.51■□□□□ 0.39
CSNK1D-213ENST00000580446 FAM163AQ96GL9 167 aaPredicted RBP17.51■□□□□ 0.39
CSNK1D-213ENST00000580446 CDCA7LQ96GN5 454 aa17.51■□□□□ 0.39
CSNK1D-213ENST00000580446 TOX2Q96NM4 488 aa17.51■□□□□ 0.39
CSNK1D-213ENST00000580446 HERC5Q9UII4 1024 aaKnown RBP17.51■□□□□ 0.39
CSNK1D-213ENST00000580446 MYADML2A6NDP7 307 aa17.5■□□□□ 0.39
CSNK1D-213ENST00000580446 GTPBP6O43824 516 aaPredicted RBP17.5■□□□□ 0.39
CSNK1D-213ENST00000580446 VAMP4O75379 141 aa17.5■□□□□ 0.39
CSNK1D-213ENST00000580446 VCAM1P19320 739 aa17.5■□□□□ 0.39
CSNK1D-213ENST00000580446 SSTR3P32745 418 aaPredicted RBP17.5■□□□□ 0.39
CSNK1D-213ENST00000580446 CATSPERGQ6ZRH7 1159 aa17.5■□□□□ 0.39
CSNK1D-213ENST00000580446 TMEM199Q8N511 208 aa17.5■□□□□ 0.39
CSNK1D-213ENST00000580446 COG5Q9UP83 839 aa17.5■□□□□ 0.39
CSNK1D-213ENST00000580446 ARHGEF15O94989 841 aa17.49■□□□□ 0.39
CSNK1D-213ENST00000580446 GH2P01242 217 aa17.49■□□□□ 0.39
CSNK1D-213ENST00000580446 ERCC3P19447 782 aa17.49■□□□□ 0.39
CSNK1D-213ENST00000580446 CCDC102BQ68D86 513 aa17.49■□□□□ 0.39
CSNK1D-213ENST00000580446 SPRED2Q7Z698 418 aa17.49■□□□□ 0.39
CSNK1D-213ENST00000580446 SLF2Q8IX21 1173 aa17.49■□□□□ 0.39
CSNK1D-213ENST00000580446 CRACR2BQ8N4Y2 399 aaPredicted RBP17.49■□□□□ 0.39
CSNK1D-213ENST00000580446 ACER1Q8TDN7 264 aa17.49■□□□□ 0.39
CSNK1D-213ENST00000580446 MAML3Q96JK9 1138 aa17.49■□□□□ 0.39
CSNK1D-213ENST00000580446 IL23AQ9NPF7 189 aa17.49■□□□□ 0.39
CSNK1D-213ENST00000580446 SIPA1L1O43166 1804 aa17.49■□□□□ 0.39
CSNK1D-213ENST00000580446 ZNF521Q96K83 1311 aa17.48■□□□□ 0.39
CSNK1D-213ENST00000580446 FANCIQ9NVI1 1328 aa17.48■□□□□ 0.39
CSNK1D-213ENST00000580446 GBF1Q92538 1859 aa17.48■□□□□ 0.39
CSNK1D-213ENST00000580446 ADAMTS4O75173 837 aa17.48■□□□□ 0.39
CSNK1D-213ENST00000580446 FGBP02675 491 aa17.48■□□□□ 0.39
CSNK1D-213ENST00000580446 CA3P07451 260 aa17.48■□□□□ 0.39
CSNK1D-213ENST00000580446 RFX5P48382 616 aaPredicted RBP17.48■□□□□ 0.39
CSNK1D-213ENST00000580446 PI16Q6UXB8 463 aa17.48■□□□□ 0.39
CSNK1D-213ENST00000580446 TBC1D9Q6ZT07 1266 aa17.48■□□□□ 0.39
CSNK1D-213ENST00000580446 MAPKAPK5Q8IW41 473 aa17.48■□□□□ 0.39
CSNK1D-213ENST00000580446 GJD3Q8N144 294 aa17.48■□□□□ 0.39
CSNK1D-213ENST00000580446 ARNTL2Q8WYA1 636 aa17.48■□□□□ 0.39
CSNK1D-213ENST00000580446 RPAP3Q9H6T3 665 aaPredicted RBP17.48■□□□□ 0.39
CSNK1D-213ENST00000580446 PI4KBQ9UBF8 816 aa17.48■□□□□ 0.39
CSNK1D-213ENST00000580446 SAP30BPQ9UHR5 308 aaKnown RBP17.48■□□□□ 0.39
CSNK1D-213ENST00000580446 ZBBXA8MT70 800 aa17.47■□□□□ 0.39
CSNK1D-213ENST00000580446 NPM3O75607 178 aaKnown RBP17.47■□□□□ 0.39
CSNK1D-213ENST00000580446 CCL23P55773 120 aa17.47■□□□□ 0.39
CSNK1D-213ENST00000580446 KCNA10Q16322 511 aa17.47■□□□□ 0.39
CSNK1D-213ENST00000580446 ZGPATQ8N5A5 531 aaKnown RBP17.47■□□□□ 0.39
CSNK1D-213ENST00000580446 VTI1AQ96AJ9 217 aa17.47■□□□□ 0.39
CSNK1D-213ENST00000580446 TRIM34Q9BYJ4 488 aa17.47■□□□□ 0.39
CSNK1D-213ENST00000580446 PALD1Q9ULE6 856 aa17.47■□□□□ 0.39
CSNK1D-213ENST00000580446 ZDBF2Q9HCK1 2354 aa17.47■□□□□ 0.39
CSNK1D-213ENST00000580446 SYNRGQ9UMZ2 1314 aa17.47■□□□□ 0.39
CSNK1D-213ENST00000580446 SEMA3EO15041 775 aa17.46■□□□□ 0.39
CSNK1D-213ENST00000580446 PGK2P07205 417 aa17.46■□□□□ 0.39
CSNK1D-213ENST00000580446 EXOSC9Q06265 439 aaKnown RBP17.46■□□□□ 0.39
CSNK1D-213ENST00000580446 PLS1Q14651 629 aa17.46■□□□□ 0.39
CSNK1D-213ENST00000580446 ERICH6Q7L0X2 663 aa17.46■□□□□ 0.39
CSNK1D-213ENST00000580446 CFAP54Q96N23 3096 aa17.45■□□□□ 0.38
CSNK1D-213ENST00000580446 SAMD1Q6SPF0 538 aaPredicted RBP17.45■□□□□ 0.38
CSNK1D-213ENST00000580446 NCAPG2Q86XI2 1143 aa17.45■□□□□ 0.38
CSNK1D-213ENST00000580446 C12orf42Q96LP6 360 aa17.45■□□□□ 0.38
CSNK1D-213ENST00000580446 SPATC1LQ9H0A9 340 aa17.45■□□□□ 0.38
CSNK1D-213ENST00000580446 PCDHA11Q9Y5I1 949 aa17.45■□□□□ 0.38
CSNK1D-213ENST00000580446 SLC4A7Q9Y6M7 1214 aa17.45■□□□□ 0.38
CSNK1D-213ENST00000580446 IL9P15248 144 aa17.44■□□□□ 0.38
CSNK1D-213ENST00000580446 RAB3GAP1Q15042 981 aa17.44■□□□□ 0.38
CSNK1D-213ENST00000580446 SPTY2D1Q68D10 685 aaPredicted RBP17.44■□□□□ 0.38
CSNK1D-213ENST00000580446 TGFBRAP1Q8WUH2 860 aa17.44■□□□□ 0.38
CSNK1D-213ENST00000580446 NUP133Q8WUM0 1156 aa17.44■□□□□ 0.38
CSNK1D-213ENST00000580446 ZFHX2Q9C0A1 2572 aaPredicted RBP17.43■□□□□ 0.38
CSNK1D-213ENST00000580446 ST18O60284 1047 aa17.43■□□□□ 0.38
CSNK1D-213ENST00000580446 ZNF865P0CJ78 1059 aaPredicted RBP17.43■□□□□ 0.38
CSNK1D-213ENST00000580446 ATP2A2P16615 1042 aaKnown RBP17.43■□□□□ 0.38
CSNK1D-213ENST00000580446 CDK7P50613 346 aa17.43■□□□□ 0.38
CSNK1D-213ENST00000580446 GRB10Q13322 594 aa17.43■□□□□ 0.38
CSNK1D-213ENST00000580446 LBX2Q6XYB7 198 aa17.43■□□□□ 0.38
CSNK1D-213ENST00000580446 HFE2Q6ZVN8 426 aa17.43■□□□□ 0.38
CSNK1D-213ENST00000580446 FAM178BQ8IXR5 827 aa17.43■□□□□ 0.38
CSNK1D-213ENST00000580446 FAM126BQ8IXS8 530 aa17.43■□□□□ 0.38
CSNK1D-213ENST00000580446 NSUN4Q96CB9 384 aaKnown RBP17.43■□□□□ 0.38
CSNK1D-213ENST00000580446 MTIF3Q9H2K0 278 aaKnown RBP17.43■□□□□ 0.38
CSNK1D-213ENST00000580446 RAI14Q9P0K7 980 aa17.43■□□□□ 0.38
CSNK1D-213ENST00000580446 A0A0G2JMZ2 1700 aa17.43■□□□□ 0.38
CSNK1D-213ENST00000580446 STRNO43815 780 aa17.42■□□□□ 0.38
CSNK1D-213ENST00000580446 POU3F3P20264 500 aaPredicted RBP17.42■□□□□ 0.38
CSNK1D-213ENST00000580446 WWC1Q8IX03 1113 aa17.42■□□□□ 0.38
CSNK1D-213ENST00000580446 AATFQ9NY61 560 aaKnown RBP eCLIP17.42■□□□□ 0.38
CSNK1D-213ENST00000580446 CEP126Q9P2H0 1117 aa17.42■□□□□ 0.38
CSNK1D-213ENST00000580446 USP34Q70CQ2 3546 aa17.42■□□□□ 0.38
CSNK1D-213ENST00000580446 ZNF236Q9UL36 1845 aa17.42■□□□□ 0.38
CSNK1D-213ENST00000580446 AKR1A1P14550 325 aa17.41■□□□□ 0.38
CSNK1D-213ENST00000580446 TIMM10P62072 90 aa17.41■□□□□ 0.38
CSNK1D-213ENST00000580446 CCSAPQ6IQ19 270 aaPredicted RBP17.41■□□□□ 0.38
CSNK1D-213ENST00000580446 KLHDC9Q8NEP7 349 aa17.41■□□□□ 0.38
CSNK1D-213ENST00000580446 PRSS33Q8NF86 280 aa17.41■□□□□ 0.38
CSNK1D-213ENST00000580446 VWCEQ96DN2 955 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms