RNA–Protein interactions for RNA: ENST00000580054.1

SMARCD2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-208ENST00000580054 ARID4AP29374 1257 aaPredicted RBP11.41□□□□□ -0.58
SMARCD2-208ENST00000580054 ADGRE1Q14246 886 aa11.41□□□□□ -0.58
SMARCD2-208ENST00000580054 CCDC85BQ15834 202 aaPredicted RBP11.41□□□□□ -0.58
SMARCD2-208ENST00000580054 ALDH1L2Q3SY69 923 aa11.41□□□□□ -0.58
SMARCD2-208ENST00000580054 LENG1Q96BZ8 264 aaPredicted RBP11.41□□□□□ -0.58
SMARCD2-208ENST00000580054 GAS2L1Q99501 681 aaPredicted RBP11.41□□□□□ -0.58
SMARCD2-208ENST00000580054 NOL10Q9BSC4 688 aaKnown RBP11.41□□□□□ -0.58
SMARCD2-208ENST00000580054 MOV10L1Q9BXT6 1211 aaKnown RBP11.41□□□□□ -0.58
SMARCD2-208ENST00000580054 RPAP3Q9H6T3 665 aaPredicted RBP11.41□□□□□ -0.58
SMARCD2-208ENST00000580054 LRP2BPQ9P2M1 347 aa11.41□□□□□ -0.58
SMARCD2-208ENST00000580054 PHF24Q9UPV7 400 aa11.41□□□□□ -0.58
SMARCD2-208ENST00000580054 TACC3Q9Y6A5 838 aa11.41□□□□□ -0.58
SMARCD2-208ENST00000580054 PGK1P00558 417 aa11.4□□□□□ -0.58
SMARCD2-208ENST00000580054 DYNLL1P63167 89 aaKnown RBP11.4□□□□□ -0.58
SMARCD2-208ENST00000580054 SLFN5Q08AF3 891 aa11.4□□□□□ -0.58
SMARCD2-208ENST00000580054 RAB3GAP1Q15042 981 aa11.4□□□□□ -0.58
SMARCD2-208ENST00000580054 NAA16Q6N069 864 aaPredicted RBP11.4□□□□□ -0.58
SMARCD2-208ENST00000580054 MEIS3Q99687 375 aa11.4□□□□□ -0.58
SMARCD2-208ENST00000580054 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.4□□□□□ -0.588e-10■■□□□ 14.1
SMARCD2-208ENST00000580054 PBX4Q9BYU1 374 aa11.4□□□□□ -0.58
SMARCD2-208ENST00000580054 KIAA1683Q9H0B3 1180 aa11.4□□□□□ -0.58
SMARCD2-208ENST00000580054 SNRKQ9NRH2 765 aa11.4□□□□□ -0.58
SMARCD2-208ENST00000580054 AKAP2Q9Y2D5 859 aa11.4□□□□□ -0.58
SMARCD2-208ENST00000580054 XIRP2A4UGR9 3374 aa11.39□□□□□ -0.59
SMARCD2-208ENST00000580054 MYH8P13535 1937 aa11.39□□□□□ -0.59
SMARCD2-208ENST00000580054 A0A1W2PQ45 241 aaPredicted RBP11.39□□□□□ -0.59
SMARCD2-208ENST00000580054 A0A1W2PQY0 241 aa11.39□□□□□ -0.59
SMARCD2-208ENST00000580054 BAG3O95817 575 aa11.39□□□□□ -0.59
SMARCD2-208ENST00000580054 HLA-DOAP06340 250 aa11.39□□□□□ -0.59
SMARCD2-208ENST00000580054 ERCC3P19447 782 aa11.39□□□□□ -0.59
SMARCD2-208ENST00000580054 USP14P54578 494 aa11.39□□□□□ -0.59
SMARCD2-208ENST00000580054 PPP4CP60510 307 aa11.39□□□□□ -0.59
SMARCD2-208ENST00000580054 MRPS5P82675 430 aaKnown RBP11.39□□□□□ -0.59
SMARCD2-208ENST00000580054 AKNAD1Q5T1N1 836 aa11.39□□□□□ -0.59
SMARCD2-208ENST00000580054 GORABQ5T7V8 394 aa11.39□□□□□ -0.59
SMARCD2-208ENST00000580054 XPNPEP3Q9NQH7 507 aa11.39□□□□□ -0.59
SMARCD2-208ENST00000580054 TMEM39AQ9NV64 488 aa11.39□□□□□ -0.59
SMARCD2-208ENST00000580054 PIEZO1Q92508 2521 aa11.39□□□□□ -0.59
SMARCD2-208ENST00000580054 MUC6Q6W4X9 2439 aa11.38□□□□□ -0.59
SMARCD2-208ENST00000580054 MCM3APO60318 1980 aa11.38□□□□□ -0.59
SMARCD2-208ENST00000580054 SRGAP3O43295 1099 aa11.38□□□□□ -0.59
SMARCD2-208ENST00000580054 PLCG2P16885 1265 aa11.38□□□□□ -0.59
SMARCD2-208ENST00000580054 GUCY1A2P33402 732 aa11.38□□□□□ -0.59
SMARCD2-208ENST00000580054 FAAP100Q0VG06 881 aa11.38□□□□□ -0.59
SMARCD2-208ENST00000580054 TATDN1Q6P1N9 297 aa11.38□□□□□ -0.59
SMARCD2-208ENST00000580054 CCDC129Q6ZRS4 1044 aa11.38□□□□□ -0.59
SMARCD2-208ENST00000580054 CDCA7LQ96GN5 454 aa11.38□□□□□ -0.59
SMARCD2-208ENST00000580054 MAML3Q96JK9 1138 aa11.38□□□□□ -0.59
SMARCD2-208ENST00000580054 SPATC1LQ9H0A9 340 aa11.38□□□□□ -0.59
SMARCD2-208ENST00000580054 PRRC2BQ5JSZ5 2229 aaKnown RBP11.37□□□□□ -0.59
SMARCD2-208ENST00000580054 RARBP10826 455 aa11.37□□□□□ -0.59
SMARCD2-208ENST00000580054 TAL1P17542 331 aaPredicted RBP11.37□□□□□ -0.59
SMARCD2-208ENST00000580054 IGFBP4P22692 258 aa11.37□□□□□ -0.59
SMARCD2-208ENST00000580054 ABCB5Q2M3G0 1257 aa11.37□□□□□ -0.59
SMARCD2-208ENST00000580054 C16orf59Q7L2K0 433 aa11.37□□□□□ -0.59
SMARCD2-208ENST00000580054 IL27Q8NEV9 243 aa11.37□□□□□ -0.59
SMARCD2-208ENST00000580054 NOB1Q9ULX3 412 aaKnown RBP11.37□□□□□ -0.59
SMARCD2-208ENST00000580054 LRRC37A2A6NM11 1700 aa11.36□□□□□ -0.59
SMARCD2-208ENST00000580054 A0A1W2PRG0 241 aa11.36□□□□□ -0.59
SMARCD2-208ENST00000580054 STRNO43815 780 aa11.36□□□□□ -0.59
SMARCD2-208ENST00000580054 CYP2E1P05181 493 aaPredicted RBP11.36□□□□□ -0.59
SMARCD2-208ENST00000580054 UQCRFS1P1P0C7P4 283 aa11.36□□□□□ -0.59
SMARCD2-208ENST00000580054 TFF2Q03403 129 aa11.36□□□□□ -0.59
SMARCD2-208ENST00000580054 EVX2Q03828 476 aa11.36□□□□□ -0.59
SMARCD2-208ENST00000580054 KIAA1755Q5JYT7 1200 aa11.36□□□□□ -0.59
SMARCD2-208ENST00000580054 TMEM240Q5SV17 173 aa11.36□□□□□ -0.59
SMARCD2-208ENST00000580054 RASIP1Q5U651 963 aa11.36□□□□□ -0.59
SMARCD2-208ENST00000580054 ATF7IPQ6VMQ6 1270 aa11.36□□□□□ -0.59
SMARCD2-208ENST00000580054 RNF180Q86T96 592 aa11.36□□□□□ -0.59
SMARCD2-208ENST00000580054 NCAPG2Q86XI2 1143 aa11.36□□□□□ -0.59
SMARCD2-208ENST00000580054 SLC44A5Q8NCS7 719 aa11.36□□□□□ -0.59
SMARCD2-208ENST00000580054 SHCBP1Q8NEM2 672 aa11.36□□□□□ -0.59
SMARCD2-208ENST00000580054 API5Q9BZZ5 524 aaKnown RBP11.36□□□□□ -0.59
SMARCD2-208ENST00000580054 TANGO6Q9C0B7 1094 aa11.36□□□□□ -0.59
SMARCD2-208ENST00000580054 PIH1D3Q9NQM4 214 aaKnown RBP11.36□□□□□ -0.59
SMARCD2-208ENST00000580054 SERPINB13Q9UIV8 391 aa11.36□□□□□ -0.59
SMARCD2-208ENST00000580054 TBX21Q9UL17 535 aa11.36□□□□□ -0.59
SMARCD2-208ENST00000580054 HDAC5Q9UQL6 1122 aa11.36□□□□□ -0.59
SMARCD2-208ENST00000580054 ROBO3Q96MS0 1386 aa11.36□□□□□ -0.59
SMARCD2-208ENST00000580054 ADAMTS4O75173 837 aa11.35□□□□□ -0.59
SMARCD2-208ENST00000580054 TIMP1P01033 207 aa11.35□□□□□ -0.59
SMARCD2-208ENST00000580054 ACRP10323 421 aa11.35□□□□□ -0.59
SMARCD2-208ENST00000580054 SHMT1P34896 483 aa11.35□□□□□ -0.59
SMARCD2-208ENST00000580054 KCNQ1P51787 676 aa11.35□□□□□ -0.59
SMARCD2-208ENST00000580054 PLS1Q14651 629 aa11.35□□□□□ -0.59
SMARCD2-208ENST00000580054 SEPT2Q15019 361 aa11.35□□□□□ -0.59
SMARCD2-208ENST00000580054 CERKLQ49MI3 558 aaPredicted RBP11.35□□□□□ -0.59
SMARCD2-208ENST00000580054 ANKRD33Q7Z3H0 272 aa11.35□□□□□ -0.59
SMARCD2-208ENST00000580054 MICALL1Q8N3F8 863 aa11.35□□□□□ -0.59
SMARCD2-208ENST00000580054 MIGA1Q8NAN2 632 aa11.35□□□□□ -0.59
SMARCD2-208ENST00000580054 NKX2-4Q9H2Z4 354 aa11.35□□□□□ -0.59
SMARCD2-208ENST00000580054 STARD7Q9NQZ5 370 aa11.35□□□□□ -0.59
SMARCD2-208ENST00000580054 YBX2Q9Y2T7 364 aaKnown RBP11.35□□□□□ -0.59
SMARCD2-208ENST00000580054 BRWD1Q9NSI6 2320 aa11.35□□□□□ -0.59
SMARCD2-208ENST00000580054 SYNGAP1Q96PV0 1343 aa11.35□□□□□ -0.59
SMARCD2-208ENST00000580054 SYNRGQ9UMZ2 1314 aa11.35□□□□□ -0.59
SMARCD2-208ENST00000580054 MYADML2A6NDP7 307 aa11.34□□□□□ -0.59
SMARCD2-208ENST00000580054 PGK2P07205 417 aa11.34□□□□□ -0.59
SMARCD2-208ENST00000580054 BMP1P13497 986 aa11.34□□□□□ -0.59
SMARCD2-208ENST00000580054 CSF2RAP15509 400 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms