RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 USP48Q86UV5 1035 aa6.29□□□□□ -1.4
CDH8-206ENST00000580044 TREML1Q86YW5 311 aa6.29□□□□□ -1.4
CDH8-206ENST00000580044 SMAP1Q8IYB5 467 aaPredicted RBP6.29□□□□□ -1.4
CDH8-206ENST00000580044 PI4K2BQ8TCG2 481 aa6.29□□□□□ -1.4
CDH8-206ENST00000580044 KCNB2Q92953 911 aa6.29□□□□□ -1.4
CDH8-206ENST00000580044 TTC14Q96N46 770 aa6.29□□□□□ -1.4
CDH8-206ENST00000580044 SSBP4Q9BWG4 385 aaPredicted RBP6.29□□□□□ -1.4
CDH8-206ENST00000580044 ZMYND15Q9H091 742 aa6.29□□□□□ -1.4
CDH8-206ENST00000580044 USP44Q9H0E7 712 aa6.29□□□□□ -1.4
CDH8-206ENST00000580044 SPTLC3Q9NUV7 552 aa6.29□□□□□ -1.4
CDH8-206ENST00000580044 ADAMTS7Q9UKP4 1686 aa6.29□□□□□ -1.4
CDH8-206ENST00000580044 CEMIPQ8WUJ3 1361 aa6.29□□□□□ -1.4
CDH8-206ENST00000580044 ZBTB42B2RXF5 422 aa6.28□□□□□ -1.4
CDH8-206ENST00000580044 SRGAP3O43295 1099 aa6.28□□□□□ -1.4
CDH8-206ENST00000580044 SURF6O75683 361 aaKnown RBP6.28□□□□□ -1.4
CDH8-206ENST00000580044 ALDH1L1O75891 902 aa6.28□□□□□ -1.4
CDH8-206ENST00000580044 EGFRP00533 1210 aa6.28□□□□□ -1.4
CDH8-206ENST00000580044 GLB1P16278 677 aa6.28□□□□□ -1.4
CDH8-206ENST00000580044 WEE1P30291 646 aa6.28□□□□□ -1.4
CDH8-206ENST00000580044 HOXC9P31274 260 aa6.28□□□□□ -1.4
CDH8-206ENST00000580044 KRT85P78386 507 aa6.28□□□□□ -1.4
CDH8-206ENST00000580044 CLASRPQ8N2M8 674 aaKnown RBP6.28□□□□□ -1.4
CDH8-206ENST00000580044 TMEM130Q8N3G9 435 aa6.28□□□□□ -1.4
CDH8-206ENST00000580044 FNBP4Q8N3X1 1017 aaPredicted RBP6.28□□□□□ -1.4
CDH8-206ENST00000580044 RNF214Q8ND24 703 aa6.28□□□□□ -1.4
CDH8-206ENST00000580044 PIK3R5Q8WYR1 880 aa6.28□□□□□ -1.4
CDH8-206ENST00000580044 CCDC94Q9BW85 323 aaPredicted RBP6.28□□□□□ -1.4
CDH8-206ENST00000580044 CEP41Q9BYV8 373 aa6.28□□□□□ -1.4
CDH8-206ENST00000580044 UPF3BQ9BZI7 483 aaKnown RBP6.28□□□□□ -1.4
CDH8-206ENST00000580044 LSG1Q9H089 658 aaKnown RBP6.28□□□□□ -1.4
CDH8-206ENST00000580044 TBX22Q9Y458 520 aa6.28□□□□□ -1.4
CDH8-206ENST00000580044 SNX14Q9Y5W7 946 aa6.28□□□□□ -1.4
CDH8-206ENST00000580044 CYP46A1Q9Y6A2 500 aa6.28□□□□□ -1.4
CDH8-206ENST00000580044 KIF1AQ12756 1690 aa6.28□□□□□ -1.4
CDH8-206ENST00000580044 RFX7Q2KHR2 1363 aa6.28□□□□□ -1.4
CDH8-206ENST00000580044 MRC1P22897 1456 aa6.28□□□□□ -1.4
CDH8-206ENST00000580044 NFAT5O94916 1531 aa6.27□□□□□ -1.41
CDH8-206ENST00000580044 A6NJR5 290 aa6.27□□□□□ -1.41
CDH8-206ENST00000580044 ADCY5O95622 1261 aa6.27□□□□□ -1.41
CDH8-206ENST00000580044 SYT1P21579 422 aa6.27□□□□□ -1.41
CDH8-206ENST00000580044 SOX18P35713 384 aa6.27□□□□□ -1.41
CDH8-206ENST00000580044 AK2P54819 239 aa6.27□□□□□ -1.41
CDH8-206ENST00000580044 NOLC1Q14978 699 aaKnown RBP eCLIP6.27□□□□□ -1.41
CDH8-206ENST00000580044 TTC39BQ5VTQ0 682 aaPredicted RBP6.27□□□□□ -1.41
CDH8-206ENST00000580044 PPP1R42Q7Z4L9 355 aa6.27□□□□□ -1.41
CDH8-206ENST00000580044 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.27□□□□□ -1.41
CDH8-206ENST00000580044 NGDNQ8NEJ9 315 aaKnown RBP6.27□□□□□ -1.41
CDH8-206ENST00000580044 FOXD4L4Q8WXT5 416 aaPredicted RBP6.27□□□□□ -1.41
CDH8-206ENST00000580044 CHMP4CQ96CF2 233 aa6.27□□□□□ -1.41
CDH8-206ENST00000580044 EVI5LQ96CN4 794 aa6.27□□□□□ -1.41
CDH8-206ENST00000580044 NSUN5Q96P11 429 aaKnown RBP6.27□□□□□ -1.41
CDH8-206ENST00000580044 SCAND2PQ9GZW5 306 aaPredicted RBP6.27□□□□□ -1.41
CDH8-206ENST00000580044 ALDH8A1Q9H2A2 487 aaPredicted RBP6.27□□□□□ -1.41
CDH8-206ENST00000580044 QTRT2Q9H974 415 aaKnown RBP6.27□□□□□ -1.41
CDH8-206ENST00000580044 ECHDC1Q9NTX5 307 aa6.27□□□□□ -1.41
CDH8-206ENST00000580044 PDRG1Q9NUG6 133 aa6.27□□□□□ -1.41
CDH8-206ENST00000580044 HMG20BQ9P0W2 317 aa6.27□□□□□ -1.41
CDH8-206ENST00000580044 PPME1Q9Y570 386 aa6.27□□□□□ -1.41
CDH8-206ENST00000580044 ABCC6O95255 1503 aa6.26□□□□□ -1.41
CDH8-206ENST00000580044 J3QW42 95 aa6.26□□□□□ -1.41
CDH8-206ENST00000580044 DLL1O00548 723 aa6.26□□□□□ -1.41
CDH8-206ENST00000580044 PAX4O43316 350 aa6.26□□□□□ -1.41
CDH8-206ENST00000580044 SMNDC1O75940 238 aaKnown RBP eCLIP6.26□□□□□ -1.41
CDH8-206ENST00000580044 CASTP20810 708 aaKnown RBP6.26□□□□□ -1.41
CDH8-206ENST00000580044 SCNN1AP37088 669 aa6.26□□□□□ -1.41
CDH8-206ENST00000580044 GRIK1P39086 918 aa6.26□□□□□ -1.41
CDH8-206ENST00000580044 OS9Q13438 667 aaPredicted RBP6.26□□□□□ -1.41
CDH8-206ENST00000580044 KRT32Q14532 448 aa6.26□□□□□ -1.41
CDH8-206ENST00000580044 SYCP1Q15431 976 aa6.26□□□□□ -1.41
CDH8-206ENST00000580044 GRIK5Q16478 980 aa6.26□□□□□ -1.41
CDH8-206ENST00000580044 MAP3K11Q16584 847 aa6.26□□□□□ -1.41
CDH8-206ENST00000580044 TSHZ3Q63HK5 1081 aa6.26□□□□□ -1.41
CDH8-206ENST00000580044 NOL8Q76FK4 1167 aaKnown RBP6.26□□□□□ -1.41
CDH8-206ENST00000580044 RUFY3Q7L099 469 aa6.26□□□□□ -1.41
CDH8-206ENST00000580044 TICAM2Q86XR7 235 aa6.26□□□□□ -1.41
CDH8-206ENST00000580044 UNC5CLQ8IV45 518 aa6.26□□□□□ -1.41
CDH8-206ENST00000580044 TTC16Q8NEE8 873 aa6.26□□□□□ -1.41
CDH8-206ENST00000580044 DNAAF4Q8WXU2 420 aa6.26□□□□□ -1.41
CDH8-206ENST00000580044 FUCA2Q9BTY2 467 aa6.26□□□□□ -1.41
CDH8-206ENST00000580044 DDX19AQ9NUU7 478 aaKnown RBP6.26□□□□□ -1.41
CDH8-206ENST00000580044 HYPKQ9NX55 129 aa6.26□□□□□ -1.41
CDH8-206ENST00000580044 MIS18AQ9NYP9 233 aa6.26□□□□□ -1.41
CDH8-206ENST00000580044 STOML1Q9UBI4 398 aa6.26□□□□□ -1.41
CDH8-206ENST00000580044 DBF4Q9UBU7 674 aaPredicted RBP6.26□□□□□ -1.41
CDH8-206ENST00000580044 CNPY2Q9Y2B0 182 aa6.26□□□□□ -1.41
CDH8-206ENST00000580044 KIF3AQ9Y496 699 aa6.26□□□□□ -1.41
CDH8-206ENST00000580044 AFDNP55196 1824 aaKnown RBP6.26□□□□□ -1.41
CDH8-206ENST00000580044 SPEF2Q9C093 1822 aa6.26□□□□□ -1.41
CDH8-206ENST00000580044 PLEKHG2Q9H7P9 1386 aa6.26□□□□□ -1.41
CDH8-206ENST00000580044 RGPD2P0DJD1 1756 aa6.26□□□□□ -1.41
CDH8-206ENST00000580044 NPHP3Q7Z494 1330 aa6.25□□□□□ -1.41
CDH8-206ENST00000580044 SLIT3O75094 1523 aa6.25□□□□□ -1.41
CDH8-206ENST00000580044 GOLGA6L4A6NEF3 574 aa6.25□□□□□ -1.41
CDH8-206ENST00000580044 DHX15O43143 795 aaKnown RBP6.25□□□□□ -1.41
CDH8-206ENST00000580044 FIBPO43427 364 aa6.25□□□□□ -1.41
CDH8-206ENST00000580044 MMP20O60882 483 aa6.25□□□□□ -1.41
CDH8-206ENST00000580044 GADD45BO75293 160 aaPredicted RBP6.25□□□□□ -1.41
CDH8-206ENST00000580044 IFIT2P09913 472 aaKnown RBP6.25□□□□□ -1.41
CDH8-206ENST00000580044 HCLS1P14317 486 aaPredicted RBP6.25□□□□□ -1.41
CDH8-206ENST00000580044 FSTP19883 344 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms