RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 CCDC178Q5BJE1 867 aa26.81■■□□□ 1.88
NDEL1-207ENST00000580012 TREML2Q5T2D2 321 aa26.81■■□□□ 1.88
NDEL1-207ENST00000580012 GADL1Q6ZQY3 521 aa26.81■■□□□ 1.88
NDEL1-207ENST00000580012 CYB5R4Q7L1T6 521 aa26.81■■□□□ 1.88
NDEL1-207ENST00000580012 DGKHQ86XP1 1220 aa26.81■■□□□ 1.88
NDEL1-207ENST00000580012 MB21D2Q8IYB1 491 aaPredicted RBP26.81■■□□□ 1.88
NDEL1-207ENST00000580012 SAGE1Q9NXZ1 904 aa26.81■■□□□ 1.88
NDEL1-207ENST00000580012 ATP2B2Q01814 1243 aa26.8■■□□□ 1.88
NDEL1-207ENST00000580012 LPAR1Q92633 364 aa26.8■■□□□ 1.88
NDEL1-207ENST00000580012 PDHXO00330 501 aa26.79■■□□□ 1.88
NDEL1-207ENST00000580012 CA12O43570 354 aa26.79■■□□□ 1.88
NDEL1-207ENST00000580012 ZKSCAN1P17029 563 aaPredicted RBP26.79■■□□□ 1.88
NDEL1-207ENST00000580012 IQCA1Q86XH1 822 aa26.79■■□□□ 1.88
NDEL1-207ENST00000580012 ZSCAN10Q96SZ4 725 aaPredicted RBP26.79■■□□□ 1.88
NDEL1-207ENST00000580012 LAMA4Q16363 1823 aa26.79■■□□□ 1.88
NDEL1-207ENST00000580012 ATAD5Q96QE3 1844 aa26.79■■□□□ 1.88
NDEL1-207ENST00000580012 F5H6K3 240 aa26.78■■□□□ 1.88
NDEL1-207ENST00000580012 KLRC3Q07444 240 aa26.78■■□□□ 1.88
NDEL1-207ENST00000580012 COL9A3Q14050 684 aaPredicted RBP26.78■■□□□ 1.88
NDEL1-207ENST00000580012 KRT32Q14532 448 aa26.78■■□□□ 1.88
NDEL1-207ENST00000580012 ZYXQ15942 572 aaKnown RBP26.78■■□□□ 1.88
NDEL1-207ENST00000580012 RALYLQ86SE5 291 aaKnown RBP26.78■■□□□ 1.88
NDEL1-207ENST00000580012 GMCL1P1Q8NEA9 526 aa26.78■■□□□ 1.88
NDEL1-207ENST00000580012 STX8Q9UNK0 236 aa26.78■■□□□ 1.88
NDEL1-207ENST00000580012 SNX14Q9Y5W7 946 aa26.78■■□□□ 1.88
NDEL1-207ENST00000580012 TRPA1O75762 1119 aa26.77■■□□□ 1.88
NDEL1-207ENST00000580012 TOP1P11387 765 aaKnown RBP26.77■■□□□ 1.88
NDEL1-207ENST00000580012 VCAM1P19320 739 aa26.77■■□□□ 1.88
NDEL1-207ENST00000580012 ANTXR2P58335 489 aa26.77■■□□□ 1.88
NDEL1-207ENST00000580012 SEC23AQ15436 765 aa26.77■■□□□ 1.88
NDEL1-207ENST00000580012 ADCK5Q3MIX3 580 aa26.77■■□□□ 1.88
NDEL1-207ENST00000580012 TMEM47Q9BQJ4 181 aa26.77■■□□□ 1.88
NDEL1-207ENST00000580012 ZKSCAN3Q9BRR0 538 aa26.77■■□□□ 1.88
NDEL1-207ENST00000580012 MTA3Q9BTC8 594 aa26.77■■□□□ 1.88
NDEL1-207ENST00000580012 GOPCQ9HD26 462 aa26.77■■□□□ 1.88
NDEL1-207ENST00000580012 LBX1P52954 281 aa26.76■■□□□ 1.87
NDEL1-207ENST00000580012 PABPC4Q13310 644 aaKnown RBP eCLIP26.76■■□□□ 1.87
NDEL1-207ENST00000580012 ENAHQ8N8S7 591 aaPredicted RBP26.76■■□□□ 1.87
NDEL1-207ENST00000580012 NEK1Q96PY6 1258 aa26.76■■□□□ 1.87
NDEL1-207ENST00000580012 BEGAINQ9BUH8 593 aa26.76■■□□□ 1.87
NDEL1-207ENST00000580012 USP17L15C9J2P7 530 aa26.75■■□□□ 1.87
NDEL1-207ENST00000580012 USP17L13C9JLJ4 530 aa26.75■■□□□ 1.87
NDEL1-207ENST00000580012 USP17L11C9JVI0 530 aa26.75■■□□□ 1.87
NDEL1-207ENST00000580012 USP17L18D6R9N7 530 aa26.75■■□□□ 1.87
NDEL1-207ENST00000580012 USP17L22D6RA61 530 aa26.75■■□□□ 1.87
NDEL1-207ENST00000580012 USP17L17D6RBQ6 530 aa26.75■■□□□ 1.87
NDEL1-207ENST00000580012 USP17L19D6RCP7 530 aa26.75■■□□□ 1.87
NDEL1-207ENST00000580012 USP17L20D6RJB6 530 aa26.75■■□□□ 1.87
NDEL1-207ENST00000580012 NDUFB10O96000 172 aa26.75■■□□□ 1.87
NDEL1-207ENST00000580012 USP17L24Q0WX57 530 aa26.75■■□□□ 1.87
NDEL1-207ENST00000580012 CATSPERGQ6ZRH7 1159 aa26.75■■□□□ 1.87
NDEL1-207ENST00000580012 LRRC47Q8N1G4 583 aaKnown RBP26.75■■□□□ 1.87
NDEL1-207ENST00000580012 IGDCC4Q8TDY8 1250 aa26.75■■□□□ 1.87
NDEL1-207ENST00000580012 R3HDMLQ9H3Y0 253 aa26.75■■□□□ 1.87
NDEL1-207ENST00000580012 TNKSO95271 1327 aa26.74■■□□□ 1.87
NDEL1-207ENST00000580012 MCM5P33992 734 aa26.74■■□□□ 1.87
NDEL1-207ENST00000580012 EXOSC10Q01780 885 aaKnown RBP26.74■■□□□ 1.87
NDEL1-207ENST00000580012 IL17RAQ96F46 866 aa26.74■■□□□ 1.87
NDEL1-207ENST00000580012 UBAC1Q9BSL1 405 aa26.74■■□□□ 1.87
NDEL1-207ENST00000580012 WDR46O15213 610 aaKnown RBP26.73■■□□□ 1.87
NDEL1-207ENST00000580012 CRHR2Q13324 411 aa26.73■■□□□ 1.87
NDEL1-207ENST00000580012 TAF1CQ15572 869 aaPredicted RBP26.73■■□□□ 1.87
NDEL1-207ENST00000580012 SPICE1Q8N0Z3 855 aa26.73■■□□□ 1.87
NDEL1-207ENST00000580012 ASCC2Q9H1I8 757 aaPredicted RBP26.73■■□□□ 1.87
NDEL1-207ENST00000580012 RPAP3Q9H6T3 665 aaPredicted RBP26.73■■□□□ 1.87
NDEL1-207ENST00000580012 ZFYVE28Q9HCC9 887 aa26.73■■□□□ 1.87
NDEL1-207ENST00000580012 ADGRA2Q96PE1 1338 aa26.72■■□□□ 1.87
NDEL1-207ENST00000580012 TBC1D8O95759 1140 aa26.72■■□□□ 1.87
NDEL1-207ENST00000580012 CYP2C8P10632 490 aa26.72■■□□□ 1.87
NDEL1-207ENST00000580012 HSPA8P11142 646 aaKnown RBP26.72■■□□□ 1.87
NDEL1-207ENST00000580012 OSBPP22059 807 aa26.72■■□□□ 1.87
NDEL1-207ENST00000580012 MCCP23508 829 aa26.72■■□□□ 1.87
NDEL1-207ENST00000580012 NOM1Q5C9Z4 860 aaKnown RBP26.72■■□□□ 1.87
NDEL1-207ENST00000580012 SLFN13Q68D06 897 aa26.72■■□□□ 1.87
NDEL1-207ENST00000580012 DHX32Q7L7V1 743 aaKnown RBP26.72■■□□□ 1.87
NDEL1-207ENST00000580012 CHST3Q7LGC8 479 aa26.72■■□□□ 1.87
NDEL1-207ENST00000580012 GMCL1Q96IK5 515 aa26.72■■□□□ 1.87
NDEL1-207ENST00000580012 PARK7Q99497 189 aaKnown RBP26.72■■□□□ 1.87
NDEL1-207ENST00000580012 PNMA3Q9UL41 463 aa26.72■■□□□ 1.87
NDEL1-207ENST00000580012 WDR19Q8NEZ3 1342 aa26.71■■□□□ 1.87
NDEL1-207ENST00000580012 MYH8P13535 1937 aa26.71■■□□□ 1.87
NDEL1-207ENST00000580012 PRC1O43663 620 aa26.71■■□□□ 1.87
NDEL1-207ENST00000580012 TLR2O60603 784 aa26.71■■□□□ 1.87
NDEL1-207ENST00000580012 HMGB1P09429 215 aaKnown RBP26.71■■□□□ 1.87
NDEL1-207ENST00000580012 P2RX7Q99572 595 aaKnown RBP26.71■■□□□ 1.87
NDEL1-207ENST00000580012 IFIT3O14879 490 aaKnown RBP26.7■■□□□ 1.86
NDEL1-207ENST00000580012 C17orf99Q6UX52 265 aa26.7■■□□□ 1.86
NDEL1-207ENST00000580012 TMEM87BQ96K49 555 aa26.7■■□□□ 1.86
NDEL1-207ENST00000580012 TM6SF1Q9BZW5 370 aa26.7■■□□□ 1.86
NDEL1-207ENST00000580012 PTPRFP10586 1907 aa26.7■■□□□ 1.86
NDEL1-207ENST00000580012 SNHG28P0DPA3 235 aa26.69■■□□□ 1.86
NDEL1-207ENST00000580012 ANAPC15P60006 121 aa26.69■■□□□ 1.86
NDEL1-207ENST00000580012 COG2Q14746 738 aa26.69■■□□□ 1.86
NDEL1-207ENST00000580012 SART3Q15020 963 aaKnown RBP26.69■■□□□ 1.86
NDEL1-207ENST00000580012 POTEEQ6S8J3 1075 aa26.69■■□□□ 1.86
NDEL1-207ENST00000580012 JAKMIP1Q96N16 626 aaKnown RBP26.69■■□□□ 1.86
NDEL1-207ENST00000580012 PSMA5P28066 241 aa26.68■■□□□ 1.86
NDEL1-207ENST00000580012 IRX3P78415 501 aaPredicted RBP26.68■■□□□ 1.86
NDEL1-207ENST00000580012 TMEM67Q5HYA8 995 aa26.68■■□□□ 1.86
NDEL1-207ENST00000580012 FAM83BQ5T0W9 1011 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms