RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 SLC44A5Q8NCS7 719 aa12.9□□□□□ -0.34
CSNK1D-210ENST00000579308 SDR42E1Q8WUS8 393 aa12.9□□□□□ -0.34
CSNK1D-210ENST00000579308 MOV10L1Q9BXT6 1211 aaKnown RBP12.9□□□□□ -0.34
CSNK1D-210ENST00000579308 CWC22Q9HCG8 908 aaKnown RBP12.9□□□□□ -0.34
CSNK1D-210ENST00000579308 DDX20Q9UHI6 824 aaKnown RBP12.9□□□□□ -0.34
CSNK1D-210ENST00000579308 MYO5AQ9Y4I1 1855 aaKnown RBP12.9□□□□□ -0.34
CSNK1D-210ENST00000579308 ZBED9Q6R2W3 1325 aa12.89□□□□□ -0.35
CSNK1D-210ENST00000579308 PRKAB2O43741 272 aa12.89□□□□□ -0.35
CSNK1D-210ENST00000579308 STRNO43815 780 aa12.89□□□□□ -0.35
CSNK1D-210ENST00000579308 RAB11FIP3O75154 756 aa12.89□□□□□ -0.35
CSNK1D-210ENST00000579308 IFIT2P09913 472 aaKnown RBP12.89□□□□□ -0.35
CSNK1D-210ENST00000579308 CYP2C19P33261 490 aa12.89□□□□□ -0.35
CSNK1D-210ENST00000579308 SLFNL1Q499Z3 407 aa12.89□□□□□ -0.35
CSNK1D-210ENST00000579308 WDR78Q5VTH9 848 aa12.89□□□□□ -0.35
CSNK1D-210ENST00000579308 OLFML2BQ68BL8 750 aa12.89□□□□□ -0.35
CSNK1D-210ENST00000579308 TMEM179Q6ZVK1 233 aa12.89□□□□□ -0.35
CSNK1D-210ENST00000579308 LPAR1Q92633 364 aa12.89□□□□□ -0.35
CSNK1D-210ENST00000579308 SWAP70Q9UH65 585 aa12.89□□□□□ -0.35
CSNK1D-210ENST00000579308 ALPK3Q96L96 1907 aa12.89□□□□□ -0.35
CSNK1D-210ENST00000579308 SMIM22K7EJ46 135 aa12.88□□□□□ -0.35
CSNK1D-210ENST00000579308 MPHOSPH10O00566 681 aaKnown RBP12.88□□□□□ -0.35
CSNK1D-210ENST00000579308 MSCO60682 206 aa12.88□□□□□ -0.35
CSNK1D-210ENST00000579308 COBLO75128 1261 aa12.88□□□□□ -0.35
CSNK1D-210ENST00000579308 MS4A1P11836 297 aa12.88□□□□□ -0.35
CSNK1D-210ENST00000579308 CYBAP13498 195 aa12.88□□□□□ -0.35
CSNK1D-210ENST00000579308 ATP5JP18859 108 aa12.88□□□□□ -0.35
CSNK1D-210ENST00000579308 ERCC3P19447 782 aa12.88□□□□□ -0.35
CSNK1D-210ENST00000579308 ADORA2AP29274 412 aa12.88□□□□□ -0.35
CSNK1D-210ENST00000579308 ADD2P35612 726 aa12.88□□□□□ -0.35
CSNK1D-210ENST00000579308 MB21D1Q8N884 522 aa12.88□□□□□ -0.35
CSNK1D-210ENST00000579308 SHCBP1Q8NEM2 672 aa12.88□□□□□ -0.35
CSNK1D-210ENST00000579308 DYNLL2Q96FJ2 89 aa12.88□□□□□ -0.35
CSNK1D-210ENST00000579308 DNAJC2Q99543 621 aaKnown RBP12.88□□□□□ -0.35
CSNK1D-210ENST00000579308 UBE2OQ9C0C9 1292 aaKnown RBP12.88□□□□□ -0.35
CSNK1D-210ENST00000579308 SENP6Q9GZR1 1112 aaPredicted RBP12.88□□□□□ -0.35
CSNK1D-210ENST00000579308 SPATC1LQ9H0A9 340 aa12.88□□□□□ -0.35
CSNK1D-210ENST00000579308 ARMT1Q9H993 441 aa12.88□□□□□ -0.35
CSNK1D-210ENST00000579308 ATP8A2Q9NTI2 1148 aa12.88□□□□□ -0.35
CSNK1D-210ENST00000579308 TMX2Q9Y320 296 aa12.88□□□□□ -0.35
CSNK1D-210ENST00000579308 IVNS1ABPQ9Y6Y0 642 aa12.88□□□□□ -0.35
CSNK1D-210ENST00000579308 LAMA2P24043 3122 aaKnown RBP12.88□□□□□ -0.35
CSNK1D-210ENST00000579308 APBB1O00213 710 aa12.87□□□□□ -0.35
CSNK1D-210ENST00000579308 DNM1LO00429 736 aa12.87□□□□□ -0.35
CSNK1D-210ENST00000579308 HMMRO75330 724 aa12.87□□□□□ -0.35
CSNK1D-210ENST00000579308 AKR1B1P15121 316 aa12.87□□□□□ -0.35
CSNK1D-210ENST00000579308 C12orf60Q5U649 245 aa12.87□□□□□ -0.35
CSNK1D-210ENST00000579308 DPP9Q86TI2 863 aa12.87□□□□□ -0.35
CSNK1D-210ENST00000579308 ABRAQ8N0Z2 381 aa12.87□□□□□ -0.35
CSNK1D-210ENST00000579308 DEFB123Q8N688 67 aa12.87□□□□□ -0.35
CSNK1D-210ENST00000579308 SLC17A8Q8NDX2 589 aa12.87□□□□□ -0.35
CSNK1D-210ENST00000579308 HAUS7Q99871 368 aa12.87□□□□□ -0.35
CSNK1D-210ENST00000579308 BOLA2Q9H3K6 86 aa12.87□□□□□ -0.35
CSNK1D-210ENST00000579308 PAG1Q9NWQ8 432 aa12.87□□□□□ -0.35
CSNK1D-210ENST00000579308 DDX19BQ9UMR2 479 aa12.87□□□□□ -0.35
CSNK1D-210ENST00000579308 COG6Q9Y2V7 657 aa12.87□□□□□ -0.35
CSNK1D-210ENST00000579308 DDX60LQ5H9U9 1706 aaKnown RBP12.87□□□□□ -0.35
CSNK1D-210ENST00000579308 MBD4O95243 580 aa12.86□□□□□ -0.35
CSNK1D-210ENST00000579308 CHGBP05060 677 aa12.86□□□□□ -0.35
CSNK1D-210ENST00000579308 CNGA1P29973 690 aa12.86□□□□□ -0.35
CSNK1D-210ENST00000579308 CDK8P49336 464 aa12.86□□□□□ -0.35
CSNK1D-210ENST00000579308 UBE3CQ15386 1083 aa12.86□□□□□ -0.35
CSNK1D-210ENST00000579308 Q7L0L9 218 aa12.86□□□□□ -0.35
CSNK1D-210ENST00000579308 CCDC17Q96LX7 622 aa12.86□□□□□ -0.35
CSNK1D-210ENST00000579308 TANGO6Q9C0B7 1094 aa12.86□□□□□ -0.35
CSNK1D-210ENST00000579308 MROH8Q9H579 483 aa12.86□□□□□ -0.35
CSNK1D-210ENST00000579308 VCPKMTQ9H867 229 aa12.86□□□□□ -0.35
CSNK1D-210ENST00000579308 MTMR10Q9NXD2 777 aa12.86□□□□□ -0.35
CSNK1D-210ENST00000579308 ADAMTS5Q9UNA0 930 aa12.86□□□□□ -0.35
CSNK1D-210ENST00000579308 MYH1P12882 1939 aa12.86□□□□□ -0.35
CSNK1D-210ENST00000579308 CYP2D7A0A087X1C5 515 aa12.85□□□□□ -0.35
CSNK1D-210ENST00000579308 USP17L12C9JPN9 530 aa12.85□□□□□ -0.35
CSNK1D-210ENST00000579308 USP17L21D6R901 530 aa12.85□□□□□ -0.35
CSNK1D-210ENST00000579308 MDM2Q00987 491 aaPredicted RBP12.85□□□□□ -0.35
CSNK1D-210ENST00000579308 C16orf86Q6ZW13 317 aa12.85□□□□□ -0.35
CSNK1D-210ENST00000579308 CLEC10AQ8IUN9 316 aa12.85□□□□□ -0.35
CSNK1D-210ENST00000579308 SPICE1Q8N0Z3 855 aa12.85□□□□□ -0.35
CSNK1D-210ENST00000579308 ATG4CQ96DT6 458 aa12.85□□□□□ -0.35
CSNK1D-210ENST00000579308 ARHGEF10LQ9HCE6 1279 aa12.85□□□□□ -0.35
CSNK1D-210ENST00000579308 POTEB2H3BUK9 544 aa12.84□□□□□ -0.35
CSNK1D-210ENST00000579308 SEPT4O43236 478 aa12.84□□□□□ -0.35
CSNK1D-210ENST00000579308 FLOT1O75955 427 aa12.84□□□□□ -0.35
CSNK1D-210ENST00000579308 ATN1P54259 1190 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-210ENST00000579308 ICA1Q05084 483 aa12.84□□□□□ -0.35
CSNK1D-210ENST00000579308 TMEM132BQ14DG7 1078 aa12.84□□□□□ -0.35
CSNK1D-210ENST00000579308 PRAMEF19Q5SWL8 479 aa12.84□□□□□ -0.35
CSNK1D-210ENST00000579308 GJC2Q5T442 439 aaPredicted RBP12.84□□□□□ -0.35
CSNK1D-210ENST00000579308 DIEXFQ68CQ4 756 aaKnown RBP12.84□□□□□ -0.35
CSNK1D-210ENST00000579308 CTR9Q6PD62 1173 aa12.84□□□□□ -0.35
CSNK1D-210ENST00000579308 ARRDC4Q8NCT1 418 aa12.84□□□□□ -0.35
CSNK1D-210ENST00000579308 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.84□□□□□ -0.35
CSNK1D-210ENST00000579308 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.84□□□□□ -0.35
CSNK1D-210ENST00000579308 STXBP5LQ9Y2K9 1186 aa12.84□□□□□ -0.35
CSNK1D-210ENST00000579308 WDR46O15213 610 aaKnown RBP12.83□□□□□ -0.36
CSNK1D-210ENST00000579308 EEF2P13639 858 aaKnown RBP12.83□□□□□ -0.36
CSNK1D-210ENST00000579308 RTP1P59025 263 aa12.83□□□□□ -0.36
CSNK1D-210ENST00000579308 PLS1Q14651 629 aa12.83□□□□□ -0.36
CSNK1D-210ENST00000579308 SNX17Q15036 470 aa12.83□□□□□ -0.36
CSNK1D-210ENST00000579308 SLC39A5Q6ZMH5 540 aa12.83□□□□□ -0.36
CSNK1D-210ENST00000579308 NCAPG2Q86XI2 1143 aa12.83□□□□□ -0.36
CSNK1D-210ENST00000579308 MAML3Q96JK9 1138 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms