RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 NMT2O60551 498 aa18.16■□□□□ 0.5
IFT20-208ENST00000578985 REC8O95072 547 aa18.16■□□□□ 0.5
IFT20-208ENST00000578985 CYP2C8P10632 490 aa18.16■□□□□ 0.5
IFT20-208ENST00000578985 VCAM1P19320 739 aa18.16■□□□□ 0.5
IFT20-208ENST00000578985 HOXA7P31268 230 aaPredicted RBP18.16■□□□□ 0.5
IFT20-208ENST00000578985 TRDNQ13061 729 aa18.16■□□□□ 0.5
IFT20-208ENST00000578985 NECTIN1Q15223 517 aa18.16■□□□□ 0.5
IFT20-208ENST00000578985 KIAA1755Q5JYT7 1200 aa18.16■□□□□ 0.5
IFT20-208ENST00000578985 CREB3L3Q68CJ9 461 aa18.16■□□□□ 0.5
IFT20-208ENST00000578985 TNS4Q8IZW8 715 aa18.16■□□□□ 0.5
IFT20-208ENST00000578985 LPAR1Q92633 364 aa18.16■□□□□ 0.5
IFT20-208ENST00000578985 ASCC2Q9H1I8 757 aaPredicted RBP18.16■□□□□ 0.5
IFT20-208ENST00000578985 GOPCQ9HD26 462 aa18.16■□□□□ 0.5
IFT20-208ENST00000578985 TAF6LQ9Y6J9 622 aa18.16■□□□□ 0.5
IFT20-208ENST00000578985 USP17L15C9J2P7 530 aa18.15■□□□□ 0.5
IFT20-208ENST00000578985 USP17L13C9JLJ4 530 aa18.15■□□□□ 0.5
IFT20-208ENST00000578985 USP17L11C9JVI0 530 aa18.15■□□□□ 0.5
IFT20-208ENST00000578985 USP17L18D6R9N7 530 aa18.15■□□□□ 0.5
IFT20-208ENST00000578985 USP17L22D6RA61 530 aa18.15■□□□□ 0.5
IFT20-208ENST00000578985 USP17L17D6RBQ6 530 aa18.15■□□□□ 0.5
IFT20-208ENST00000578985 USP17L19D6RCP7 530 aa18.15■□□□□ 0.5
IFT20-208ENST00000578985 USP17L20D6RJB6 530 aa18.15■□□□□ 0.5
IFT20-208ENST00000578985 E7EWF7 191 aa18.15■□□□□ 0.5
IFT20-208ENST00000578985 RAD21O60216 631 aa18.15■□□□□ 0.5
IFT20-208ENST00000578985 TLR2O60603 784 aa18.15■□□□□ 0.5
IFT20-208ENST00000578985 IRX3P78415 501 aaPredicted RBP18.15■□□□□ 0.5
IFT20-208ENST00000578985 USP17L24Q0WX57 530 aa18.15■□□□□ 0.5
IFT20-208ENST00000578985 NOM1Q5C9Z4 860 aaKnown RBP18.15■□□□□ 0.5
IFT20-208ENST00000578985 SPICE1Q8N0Z3 855 aa18.15■□□□□ 0.5
IFT20-208ENST00000578985 LRRC47Q8N1G4 583 aaKnown RBP18.15■□□□□ 0.5
IFT20-208ENST00000578985 RPAP3Q9H6T3 665 aaPredicted RBP18.15■□□□□ 0.5
IFT20-208ENST00000578985 ZSWIM5Q9P217 1185 aa18.15■□□□□ 0.5
IFT20-208ENST00000578985 SYNPO2Q9UMS6 1093 aa18.15■□□□□ 0.5
IFT20-208ENST00000578985 STX8Q9UNK0 236 aa18.15■□□□□ 0.5
IFT20-208ENST00000578985 NOVP48745 357 aa18.14■□□□□ 0.49
IFT20-208ENST00000578985 RNF20Q5VTR2 975 aa18.14■□□□□ 0.49
IFT20-208ENST00000578985 CATSPERGQ6ZRH7 1159 aa18.14■□□□□ 0.49
IFT20-208ENST00000578985 STOX1Q6ZVD7 989 aa18.14■□□□□ 0.49
IFT20-208ENST00000578985 IQCA1Q86XH1 822 aa18.14■□□□□ 0.49
IFT20-208ENST00000578985 SMCR8Q8TEV9 937 aaPredicted RBP18.14■□□□□ 0.49
IFT20-208ENST00000578985 CPA4Q9UI42 421 aa18.14■□□□□ 0.49
IFT20-208ENST00000578985 ADGRA2Q96PE1 1338 aa18.14■□□□□ 0.49
IFT20-208ENST00000578985 F5H6K3 240 aa18.13■□□□□ 0.49
IFT20-208ENST00000578985 NDUFB10O96000 172 aa18.13■□□□□ 0.49
IFT20-208ENST00000578985 KLRC3Q07444 240 aa18.13■□□□□ 0.49
IFT20-208ENST00000578985 CCDC178Q5BJE1 867 aa18.13■□□□□ 0.49
IFT20-208ENST00000578985 RALYLQ86SE5 291 aaKnown RBP18.13■□□□□ 0.49
IFT20-208ENST00000578985 NCOA7Q8NI08 942 aa18.13■□□□□ 0.49
IFT20-208ENST00000578985 ZNF296Q8WUU4 475 aaPredicted RBP18.13■□□□□ 0.49
IFT20-208ENST00000578985 P2RX7Q99572 595 aaKnown RBP18.13■□□□□ 0.49
IFT20-208ENST00000578985 ZKSCAN3Q9BRR0 538 aa18.13■□□□□ 0.49
IFT20-208ENST00000578985 PRDM10Q9NQV6 1147 aa18.13■□□□□ 0.49
IFT20-208ENST00000578985 WDR46O15213 610 aaKnown RBP18.12■□□□□ 0.49
IFT20-208ENST00000578985 FKTNO75072 461 aa18.12■□□□□ 0.49
IFT20-208ENST00000578985 TOP1P11387 765 aaKnown RBP18.12■□□□□ 0.49
IFT20-208ENST00000578985 SLFN13Q68D06 897 aa18.12■□□□□ 0.49
IFT20-208ENST00000578985 C17orf99Q6UX52 265 aa18.12■□□□□ 0.49
IFT20-208ENST00000578985 GMCL1P1Q8NEA9 526 aa18.12■□□□□ 0.49
IFT20-208ENST00000578985 TTC14Q96N46 770 aa18.12■□□□□ 0.49
IFT20-208ENST00000578985 ZSCAN10Q96SZ4 725 aaPredicted RBP18.12■□□□□ 0.49
IFT20-208ENST00000578985 TANGO6Q9C0B7 1094 aa18.12■□□□□ 0.49
IFT20-208ENST00000578985 GCLCP48506 637 aaPredicted RBP18.11■□□□□ 0.49
IFT20-208ENST00000578985 SP3Q02447 781 aa18.11■□□□□ 0.49
IFT20-208ENST00000578985 FAM83BQ5T0W9 1011 aa18.11■□□□□ 0.49
IFT20-208ENST00000578985 RCSD1Q6JBY9 416 aa18.11■□□□□ 0.49
IFT20-208ENST00000578985 CYB5R4Q7L1T6 521 aa18.11■□□□□ 0.49
IFT20-208ENST00000578985 TMEM47Q9BQJ4 181 aa18.11■□□□□ 0.49
IFT20-208ENST00000578985 UBAC1Q9BSL1 405 aa18.11■□□□□ 0.49
IFT20-208ENST00000578985 PARP14Q460N5 1801 aa18.11■□□□□ 0.49
IFT20-208ENST00000578985 RLFQ13129 1914 aa18.11■□□□□ 0.49
IFT20-208ENST00000578985 EPB41L2O43491 1005 aaKnown RBP18.1■□□□□ 0.49
IFT20-208ENST00000578985 BCRP11274 1271 aa18.1■□□□□ 0.49
IFT20-208ENST00000578985 ZKSCAN1P17029 563 aaPredicted RBP18.1■□□□□ 0.49
IFT20-208ENST00000578985 HERVK_113P62684 666 aa18.1■□□□□ 0.49
IFT20-208ENST00000578985 COG2Q14746 738 aa18.1■□□□□ 0.49
IFT20-208ENST00000578985 DGKHQ86XP1 1220 aa18.1■□□□□ 0.49
IFT20-208ENST00000578985 ANKS1AQ92625 1134 aa18.1■□□□□ 0.49
IFT20-208ENST00000578985 NUP88Q99567 741 aaPredicted RBP18.1■□□□□ 0.49
IFT20-208ENST00000578985 TNKSO95271 1327 aa18.09■□□□□ 0.49
IFT20-208ENST00000578985 FLOT1O75955 427 aa18.09■□□□□ 0.49
IFT20-208ENST00000578985 HSPA4P34932 840 aa18.09■□□□□ 0.49
IFT20-208ENST00000578985 TSGA10IPQ3SY00 556 aa18.09■□□□□ 0.49
IFT20-208ENST00000578985 MB21D2Q8IYB1 491 aaPredicted RBP18.09■□□□□ 0.49
IFT20-208ENST00000578985 RASEFQ8IZ41 740 aa18.09■□□□□ 0.49
IFT20-208ENST00000578985 ANKRD13CQ8N6S4 541 aa18.09■□□□□ 0.49
IFT20-208ENST00000578985 ENAHQ8N8S7 591 aaPredicted RBP18.09■□□□□ 0.49
IFT20-208ENST00000578985 GTF3C2Q8WUA4 911 aaPredicted RBP18.09■□□□□ 0.49
IFT20-208ENST00000578985 KCNB2Q92953 911 aa18.09■□□□□ 0.49
IFT20-208ENST00000578985 USP26Q9BXU7 913 aa18.09■□□□□ 0.49
IFT20-208ENST00000578985 HOXC10Q9NYD6 342 aa18.09■□□□□ 0.49
IFT20-208ENST00000578985 MTMR7Q9Y216 660 aa18.09■□□□□ 0.49
IFT20-208ENST00000578985 BMP3P12645 472 aa18.08■□□□□ 0.48
IFT20-208ENST00000578985 CHMP4CQ96CF2 233 aa18.08■□□□□ 0.48
IFT20-208ENST00000578985 ERO1AQ96HE7 468 aa18.08■□□□□ 0.48
IFT20-208ENST00000578985 GMCL1Q96IK5 515 aa18.08■□□□□ 0.48
IFT20-208ENST00000578985 MGAMO43451 1857 aa18.07■□□□□ 0.48
IFT20-208ENST00000578985 SPDYE16A6NNV3 312 aaPredicted RBP18.07■□□□□ 0.48
IFT20-208ENST00000578985 IFIT3O14879 490 aaKnown RBP18.07■□□□□ 0.48
IFT20-208ENST00000578985 EIF5BO60841 1220 aaKnown RBP18.07■□□□□ 0.48
IFT20-208ENST00000578985 MCCP23508 829 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms