RNA–Protein interactions for RNA: ENST00000578910.1

CCDC57-212, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-212ENST00000578910 DEFB118Q96PH6 123 aa17.44■□□□□ 0.38
CCDC57-212ENST00000578910 FSD1Q9BTV5 496 aa17.44■□□□□ 0.38
CCDC57-212ENST00000578910 ARHGEF10LQ9HCE6 1279 aa17.44■□□□□ 0.38
CCDC57-212ENST00000578910 TFRCP02786 760 aaKnown RBP17.43■□□□□ 0.38
CCDC57-212ENST00000578910 HMGCRP04035 888 aa17.43■□□□□ 0.38
CCDC57-212ENST00000578910 GNAT2P19087 354 aa17.43■□□□□ 0.38
CCDC57-212ENST00000578910 ATP2B2Q01814 1243 aa17.43■□□□□ 0.38
CCDC57-212ENST00000578910 ZMYM1Q5SVZ6 1142 aa17.43■□□□□ 0.38
CCDC57-212ENST00000578910 MORN1Q5T089 497 aa17.43■□□□□ 0.38
CCDC57-212ENST00000578910 IFNL3Q8IZI9 196 aa17.43■□□□□ 0.38
CCDC57-212ENST00000578910 SPICE1Q8N0Z3 855 aa17.43■□□□□ 0.38
CCDC57-212ENST00000578910 EXOC6Q8TAG9 804 aa17.43■□□□□ 0.38
CCDC57-212ENST00000578910 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.43■□□□□ 0.38
CCDC57-212ENST00000578910 VCPKMTQ9H867 229 aa17.43■□□□□ 0.38
CCDC57-212ENST00000578910 KANSL2Q9H9L4 492 aa17.43■□□□□ 0.38
CCDC57-212ENST00000578910 MKNK2Q9HBH9 465 aa17.43■□□□□ 0.38
CCDC57-212ENST00000578910 EPB41L4AQ9HCS5 686 aaPredicted RBP17.43■□□□□ 0.38
CCDC57-212ENST00000578910 STAP2Q9UGK3 403 aa17.43■□□□□ 0.38
CCDC57-212ENST00000578910 XRCC5P13010 732 aaKnown RBP17.42■□□□□ 0.38
CCDC57-212ENST00000578910 RASA1P20936 1047 aa17.42■□□□□ 0.38
CCDC57-212ENST00000578910 DSG3P32926 999 aa17.42■□□□□ 0.38
CCDC57-212ENST00000578910 PDE1AP54750 535 aa17.42■□□□□ 0.38
CCDC57-212ENST00000578910 CCNA1P78396 465 aa17.42■□□□□ 0.38
CCDC57-212ENST00000578910 AAMPQ13685 434 aa17.42■□□□□ 0.38
CCDC57-212ENST00000578910 UBE2Q1Q7Z7E8 422 aa17.42■□□□□ 0.38
CCDC57-212ENST00000578910 TRIB2Q92519 343 aa17.42■□□□□ 0.38
CCDC57-212ENST00000578910 TANGO6Q9C0B7 1094 aa17.42■□□□□ 0.38
CCDC57-212ENST00000578910 PAK6Q9NQU5 681 aaPredicted RBP17.42■□□□□ 0.38
CCDC57-212ENST00000578910 RPTORQ8N122 1335 aa17.42■□□□□ 0.38
CCDC57-212ENST00000578910 PLXNB2O15031 1838 aa17.42■□□□□ 0.38
CCDC57-212ENST00000578910 IGHDP01880 384 aa17.41■□□□□ 0.38
CCDC57-212ENST00000578910 PTPREP23469 700 aa17.41■□□□□ 0.38
CCDC57-212ENST00000578910 TDO2P48775 406 aa17.41■□□□□ 0.38
CCDC57-212ENST00000578910 CCL14Q16627 93 aa17.41■□□□□ 0.38
CCDC57-212ENST00000578910 WDR78Q5VTH9 848 aa17.41■□□□□ 0.38
CCDC57-212ENST00000578910 B4GALNT3Q6L9W6 998 aa17.41■□□□□ 0.38
CCDC57-212ENST00000578910 LPAR1Q92633 364 aa17.41■□□□□ 0.38
CCDC57-212ENST00000578910 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.41■□□□□ 0.38
CCDC57-212ENST00000578910 RWDD1Q9H446 243 aaPredicted RBP17.41■□□□□ 0.38
CCDC57-212ENST00000578910 SH2D4AQ9H788 454 aa17.41■□□□□ 0.38
CCDC57-212ENST00000578910 CWC22Q9HCG8 908 aaKnown RBP17.41■□□□□ 0.38
CCDC57-212ENST00000578910 RGS2P41220 211 aa17.4■□□□□ 0.38
CCDC57-212ENST00000578910 SMC5Q8IY18 1101 aa17.4■□□□□ 0.38
CCDC57-212ENST00000578910 ZNF444Q8N0Y2 327 aaPredicted RBP17.4■□□□□ 0.38
CCDC57-212ENST00000578910 SOCS4Q8WXH5 440 aa17.4■□□□□ 0.38
CCDC57-212ENST00000578910 EVI5LQ96CN4 794 aa17.4■□□□□ 0.38
CCDC57-212ENST00000578910 CRISPLD2Q9H0B8 497 aa17.4■□□□□ 0.38
CCDC57-212ENST00000578910 HMX1Q9NP08 348 aaPredicted RBP17.4■□□□□ 0.38
CCDC57-212ENST00000578910 MYH8P13535 1937 aa17.39■□□□□ 0.37
CCDC57-212ENST00000578910 PRDM1O75626 825 aa17.39■□□□□ 0.37
CCDC57-212ENST00000578910 FLOT1O75955 427 aa17.39■□□□□ 0.37
CCDC57-212ENST00000578910 CACNB2Q08289 660 aaPredicted RBP17.39■□□□□ 0.37
CCDC57-212ENST00000578910 MAP2K5Q13163 448 aa17.39■□□□□ 0.37
CCDC57-212ENST00000578910 SAMD1Q6SPF0 538 aaPredicted RBP17.39■□□□□ 0.37
CCDC57-212ENST00000578910 CCDC129Q6ZRS4 1044 aa17.39■□□□□ 0.37
CCDC57-212ENST00000578910 DPF3Q92784 378 aa17.39■□□□□ 0.37
CCDC57-212ENST00000578910 MOV10L1Q9BXT6 1211 aaKnown RBP17.39■□□□□ 0.37
CCDC57-212ENST00000578910 LNPKQ9C0E8 428 aa17.39■□□□□ 0.37
CCDC57-212ENST00000578910 SUPT16HQ9Y5B9 1047 aaKnown RBP17.39■□□□□ 0.37
CCDC57-212ENST00000578910 SLC15A5A6NIM6 579 aa17.38■□□□□ 0.37
CCDC57-212ENST00000578910 WDR46O15213 610 aaKnown RBP17.38■□□□□ 0.37
CCDC57-212ENST00000578910 RAD21O60216 631 aa17.38■□□□□ 0.37
CCDC57-212ENST00000578910 FARP2O94887 1054 aaPredicted RBP17.38■□□□□ 0.37
CCDC57-212ENST00000578910 CAPN2P17655 700 aa17.38■□□□□ 0.37
CCDC57-212ENST00000578910 MAP3K21Q5TCX8 1036 aa17.38■□□□□ 0.37
CCDC57-212ENST00000578910 TRMT44Q8IYL2 757 aaKnown RBP17.38■□□□□ 0.37
CCDC57-212ENST00000578910 ATG4CQ96DT6 458 aa17.38■□□□□ 0.37
CCDC57-212ENST00000578910 NACAP1Q9BZK3 213 aa17.38■□□□□ 0.37
CCDC57-212ENST00000578910 SPATC1LQ9H0A9 340 aa17.38■□□□□ 0.37
CCDC57-212ENST00000578910 NYAP2Q9P242 653 aa17.38■□□□□ 0.37
CCDC57-212ENST00000578910 CLIP2Q9UDT6 1046 aa17.38■□□□□ 0.37
CCDC57-212ENST00000578910 PRKAR2AP13861 404 aaKnown RBP17.37■□□□□ 0.37
CCDC57-212ENST00000578910 PLS1Q14651 629 aa17.37■□□□□ 0.37
CCDC57-212ENST00000578910 MB21D1Q8N884 522 aa17.37■□□□□ 0.37
CCDC57-212ENST00000578910 NPLOC4Q8TAT6 608 aa17.37■□□□□ 0.37
CCDC57-212ENST00000578910 NAPBQ9H115 298 aa17.37■□□□□ 0.37
CCDC57-212ENST00000578910 GOPCQ9HD26 462 aa17.37■□□□□ 0.37
CCDC57-212ENST00000578910 FBXO28Q9NVF7 368 aa17.37■□□□□ 0.37
CCDC57-212ENST00000578910 FLRT1Q9NZU1 646 aa17.37■□□□□ 0.37
CCDC57-212ENST00000578910 ADAMTS5Q9UNA0 930 aa17.37■□□□□ 0.37
CCDC57-212ENST00000578910 IVNS1ABPQ9Y6Y0 642 aa17.37■□□□□ 0.37
CCDC57-212ENST00000578910 ROBO3Q96MS0 1386 aa17.37■□□□□ 0.37
CCDC57-212ENST00000578910 RLFQ13129 1914 aa17.37■□□□□ 0.37
CCDC57-212ENST00000578910 IGKV6D-41A0A0C4DH26 115 aa17.36■□□□□ 0.37
CCDC57-212ENST00000578910 FOXP2O15409 715 aa17.36■□□□□ 0.37
CCDC57-212ENST00000578910 STRNO43815 780 aa17.36■□□□□ 0.37
CCDC57-212ENST00000578910 ZKSCAN1P17029 563 aaPredicted RBP17.36■□□□□ 0.37
CCDC57-212ENST00000578910 ERCC3P19447 782 aa17.36■□□□□ 0.37
CCDC57-212ENST00000578910 PPARAQ07869 468 aa17.36■□□□□ 0.37
CCDC57-212ENST00000578910 FAM83BQ5T0W9 1011 aa17.36■□□□□ 0.37
CCDC57-212ENST00000578910 PAWRQ96IZ0 340 aaKnown RBP17.36■□□□□ 0.37
CCDC57-212ENST00000578910 APBA2Q99767 749 aa17.36■□□□□ 0.37
CCDC57-212ENST00000578910 ZNF287Q9HBT7 754 aa17.36■□□□□ 0.37
CCDC57-212ENST00000578910 INCENPQ9NQS7 918 aa17.36■□□□□ 0.37
CCDC57-212ENST00000578910 F5H6K3 240 aa17.35■□□□□ 0.37
CCDC57-212ENST00000578910 H0YGN5 161 aa17.35■□□□□ 0.37
CCDC57-212ENST00000578910 CCND3P30281 292 aaPredicted RBP17.35■□□□□ 0.37
CCDC57-212ENST00000578910 NUCB1Q02818 461 aa17.35■□□□□ 0.37
CCDC57-212ENST00000578910 PDE4BQ07343 736 aa17.35■□□□□ 0.37
CCDC57-212ENST00000578910 KLRC3Q07444 240 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms