RNA–Protein interactions for RNA: ENST00000578664.1

GAPLINC-201, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 440 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-201ENST00000578664 INTS3Q68E01 1043 aaKnown RBP5.24□□□□□ -1.57
GAPLINC-201ENST00000578664 ZNF787Q6DD87 383 aa5.24□□□□□ -1.57
GAPLINC-201ENST00000578664 PPP4R3AQ6IN85 833 aa5.24□□□□□ -1.57
GAPLINC-201ENST00000578664 CYB5RLQ6IPT4 315 aa5.24□□□□□ -1.57
GAPLINC-201ENST00000578664 MZT2AQ6P582 158 aa5.24□□□□□ -1.57
GAPLINC-201ENST00000578664 RUFY4Q6ZNE9 571 aa5.24□□□□□ -1.57
GAPLINC-201ENST00000578664 ANKRD23Q86SG2 305 aa5.24□□□□□ -1.57
GAPLINC-201ENST00000578664 NLRP13Q86W25 1043 aa5.24□□□□□ -1.57
GAPLINC-201ENST00000578664 RHPN1Q8TCX5 695 aa5.24□□□□□ -1.57
GAPLINC-201ENST00000578664 TBATAQ96M53 351 aa5.24□□□□□ -1.57
GAPLINC-201ENST00000578664 ZIC5Q96T25 663 aa5.24□□□□□ -1.57
GAPLINC-201ENST00000578664 TCF12Q99081 682 aa5.24□□□□□ -1.57
GAPLINC-201ENST00000578664 TTC1Q99614 292 aa5.24□□□□□ -1.57
GAPLINC-201ENST00000578664 LIN7BQ9HAP6 207 aa5.24□□□□□ -1.57
GAPLINC-201ENST00000578664 OSGEPQ9NPF4 335 aa5.24□□□□□ -1.57
GAPLINC-201ENST00000578664 ZFATQ9P243 1243 aa5.24□□□□□ -1.57
GAPLINC-201ENST00000578664 IP6K2Q9UHH9 426 aa5.24□□□□□ -1.57
GAPLINC-201ENST00000578664 SALL4Q9UJQ4 1053 aa5.24□□□□□ -1.57
GAPLINC-201ENST00000578664 RABGAP1Q9Y3P9 1069 aa5.24□□□□□ -1.57
GAPLINC-201ENST00000578664 TRBV23-1A0A0A0MS06 115 aa5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 DYTNA2CJ06 578 aa5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 MEIS3P2A8K0S8 358 aa5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 K7ESF4 209 aa5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 AGRPO00253 132 aa5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 APAF1O14727 1248 aa5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 KHNYNO15037 678 aaKnown RBP5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 SUSD5O60279 629 aa5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 PPFIA3O75145 1194 aa5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 CT47B1P0C2W7 299 aaPredicted RBP5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 FAPQ12884 760 aa5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 DDX10Q13206 875 aaKnown RBP5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 BIRC3Q13489 604 aa5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 UBAP2LQ14157 1087 aaKnown RBP5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 TRIM61Q5EBN2 209 aa5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 FAM209AQ5JX71 171 aa5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 ZKSCAN2Q63HK3 967 aa5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 LVRNQ6Q4G3 990 aa5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 CCNJLQ8IV13 435 aa5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 TPH2Q8IWU9 490 aa5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 SUGP1Q8IWZ8 645 aaKnown RBP5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 CLASRPQ8N2M8 674 aaKnown RBP5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 FAM43AQ8N2R8 423 aa5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 ZSCAN1Q8NBB4 408 aa5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 JARID2Q92833 1246 aaPredicted RBP5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 KLRG1Q96E93 195 aa5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 TNIP3Q96KP6 325 aa5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 CDC6Q99741 560 aa5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 MTFR1LQ9H019 292 aa5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 IFT22Q9H7X7 185 aa5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 PHAXQ9H814 394 aaKnown RBP5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 SEC31BQ9NQW1 1179 aa5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 PHTF1Q9UMS5 762 aa5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 CYP8B1Q9UNU6 501 aa5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 SAMM50Q9Y512 469 aa5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 ATAD2BQ9ULI0 1458 aa5.23□□□□□ -1.57
GAPLINC-201ENST00000578664 APBA3O96018 575 aa5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 SETSIPP0DME0 302 aa5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 BPIP17213 487 aa5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 TATP17735 454 aaPredicted RBP5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 VCAM1P19320 739 aa5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 ITGA6P23229 1130 aa5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 ITPKAP23677 461 aa5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 RENBPP51606 427 aa5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 GTF2A2P52657 109 aa5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 AK2P54819 239 aa5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 TBX2Q13207 712 aaPredicted RBP5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 LBRQ14739 615 aaKnown RBP5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 PCBP1Q15365 356 aaKnown RBP eCLIP5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 CCDC184Q52MB2 194 aa5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 SCARA3Q6AZY7 606 aa5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 CFAP161Q6P656 301 aa5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 C1orf228Q6PIY5 440 aa5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 VHLLQ6RSH7 139 aa5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 NPAS3Q8IXF0 933 aa5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 TRIM22Q8IYM9 498 aa5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 NKAPQ8N5F7 415 aaKnown RBP5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 IL17REQ8NFR9 667 aa5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 NANOS1Q8WY41 292 aaKnown RBP5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 AIDAQ96BJ3 306 aa5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 CLIP3Q96DZ5 547 aa5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 LATS2Q9NRM7 1088 aa5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 USP20Q9Y2K6 914 aa5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 GIT1Q9Y2X7 761 aa5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 PCDHB5Q9Y5E4 795 aa5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 PCDHB14Q9Y5E9 798 aa5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 DGKBQ9Y6T7 804 aa5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 MORC2Q9Y6X9 1032 aaPredicted RBP5.22□□□□□ -1.57
GAPLINC-201ENST00000578664 THOC2Q8NI27 1593 aaKnown RBP5.21□□□□□ -1.57
GAPLINC-201ENST00000578664 TRAV20A0A0B4J274 112 aa5.21□□□□□ -1.58
GAPLINC-201ENST00000578664 ABHD14A-ACY1A0A1B0GW23 586 aa5.21□□□□□ -1.58
GAPLINC-201ENST00000578664 A0A1W2PNR3 127 aa5.21□□□□□ -1.58
GAPLINC-201ENST00000578664 ORC4O43929 436 aa5.21□□□□□ -1.58
GAPLINC-201ENST00000578664 HIP1RO75146 1068 aa5.21□□□□□ -1.58
GAPLINC-201ENST00000578664 XYLBO75191 536 aa5.21□□□□□ -1.58
GAPLINC-201ENST00000578664 DNAJC8O75937 253 aaPredicted RBP5.21□□□□□ -1.58
GAPLINC-201ENST00000578664 SNUPNO95149 360 aaKnown RBP5.21□□□□□ -1.58
GAPLINC-201ENST00000578664 ASLP04424 464 aa5.21□□□□□ -1.58
GAPLINC-201ENST00000578664 LPOP22079 712 aaPredicted RBP5.21□□□□□ -1.58
GAPLINC-201ENST00000578664 STK3Q13188 491 aa5.21□□□□□ -1.58
GAPLINC-201ENST00000578664 PDE1CQ14123 709 aaPredicted RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms