RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 EDC3Q96F86 508 aaKnown RBP8.91□□□□□ -0.98
CDK5RAP3-209ENST00000578663 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.91□□□□□ -0.988e-21■□□□□ 11.2
CDK5RAP3-209ENST00000578663 NKX2-4Q9H2Z4 354 aa8.91□□□□□ -0.98
CDK5RAP3-209ENST00000578663 IGSF5Q9NSI5 407 aa8.91□□□□□ -0.98
CDK5RAP3-209ENST00000578663 YBX2Q9Y2T7 364 aaKnown RBP8.91□□□□□ -0.98
CDK5RAP3-209ENST00000578663 MTCH2Q9Y6C9 303 aa8.91□□□□□ -0.98
CDK5RAP3-209ENST00000578663 SPTBN2O15020 2390 aa8.9□□□□□ -0.98
CDK5RAP3-209ENST00000578663 FAM196BA6NMK8 535 aa8.9□□□□□ -0.98
CDK5RAP3-209ENST00000578663 KBTBD13C9JR72 458 aa8.9□□□□□ -0.98
CDK5RAP3-209ENST00000578663 DCXO43602 365 aa8.9□□□□□ -0.98
CDK5RAP3-209ENST00000578663 HOXB3P14651 431 aaPredicted RBP8.9□□□□□ -0.98
CDK5RAP3-209ENST00000578663 POU3F3P20264 500 aaPredicted RBP8.9□□□□□ -0.98
CDK5RAP3-209ENST00000578663 PHKA1P46020 1223 aa8.9□□□□□ -0.98
CDK5RAP3-209ENST00000578663 RFX5P48382 616 aaPredicted RBP8.9□□□□□ -0.98
CDK5RAP3-209ENST00000578663 KRT40Q6A162 431 aa8.9□□□□□ -0.98
CDK5RAP3-209ENST00000578663 ATG9AQ7Z3C6 839 aa8.9□□□□□ -0.98
CDK5RAP3-209ENST00000578663 WDR63Q8IWG1 891 aa8.9□□□□□ -0.98
CDK5RAP3-209ENST00000578663 RABGAP1Q9Y3P9 1069 aa8.9□□□□□ -0.98
CDK5RAP3-209ENST00000578663 GCN1Q92616 2671 aaKnown RBP8.89□□□□□ -0.99
CDK5RAP3-209ENST00000578663 SIPA1L1O43166 1804 aa8.89□□□□□ -0.99
CDK5RAP3-209ENST00000578663 CEP250Q9BV73 2442 aa8.89□□□□□ -0.99
CDK5RAP3-209ENST00000578663 USP17L10C9JJH3 530 aa8.89□□□□□ -0.99
CDK5RAP3-209ENST00000578663 CYBAP13498 195 aa8.89□□□□□ -0.99
CDK5RAP3-209ENST00000578663 FPGSQ05932 587 aa8.89□□□□□ -0.99
CDK5RAP3-209ENST00000578663 RASGRF1Q13972 1273 aa8.89□□□□□ -0.99
CDK5RAP3-209ENST00000578663 GRB14Q14449 540 aa8.89□□□□□ -0.99
CDK5RAP3-209ENST00000578663 RRP1BQ14684 758 aaKnown RBP8.89□□□□□ -0.99
CDK5RAP3-209ENST00000578663 Q3C1V9 767 aa8.89□□□□□ -0.99
CDK5RAP3-209ENST00000578663 LBX2Q6XYB7 198 aa8.89□□□□□ -0.99
CDK5RAP3-209ENST00000578663 C16orf59Q7L2K0 433 aa8.89□□□□□ -0.99
CDK5RAP3-209ENST00000578663 HLA-CQ95604 372 aa8.89□□□□□ -0.99
CDK5RAP3-209ENST00000578663 C12orf42Q96LP6 360 aa8.89□□□□□ -0.99
CDK5RAP3-209ENST00000578663 MFSD14AQ96MC6 490 aa8.89□□□□□ -0.99
CDK5RAP3-209ENST00000578663 DHX36Q9H2U1 1008 aaKnown RBP8.89□□□□□ -0.99
CDK5RAP3-209ENST00000578663 CWC22Q9HCG8 908 aaKnown RBP8.89□□□□□ -0.99
CDK5RAP3-209ENST00000578663 CEP126Q9P2H0 1117 aa8.89□□□□□ -0.99
CDK5RAP3-209ENST00000578663 SOWAHBA6NEL2 793 aa8.88□□□□□ -0.99
CDK5RAP3-209ENST00000578663 RFXAPO00287 272 aa8.88□□□□□ -0.99
CDK5RAP3-209ENST00000578663 LDHCP07864 332 aa8.88□□□□□ -0.99
CDK5RAP3-209ENST00000578663 PTPREP23469 700 aa8.88□□□□□ -0.99
CDK5RAP3-209ENST00000578663 GSTO1P78417 241 aa8.88□□□□□ -0.99
CDK5RAP3-209ENST00000578663 ATP2B2Q01814 1243 aa8.88□□□□□ -0.99
CDK5RAP3-209ENST00000578663 OLFML2BQ68BL8 750 aa8.88□□□□□ -0.99
CDK5RAP3-209ENST00000578663 CCDC102BQ68D86 513 aa8.88□□□□□ -0.99
CDK5RAP3-209ENST00000578663 METTL16Q86W50 562 aaKnown RBP8.88□□□□□ -0.99
CDK5RAP3-209ENST00000578663 PAGR1Q9BTK6 254 aa8.88□□□□□ -0.99
CDK5RAP3-209ENST00000578663 FLRT1Q9NZU1 646 aa8.88□□□□□ -0.99
CDK5RAP3-209ENST00000578663 PI4KBQ9UBF8 816 aa8.88□□□□□ -0.99
CDK5RAP3-209ENST00000578663 ABCF2Q9UG63 623 aa8.88□□□□□ -0.99
CDK5RAP3-209ENST00000578663 TACC3Q9Y6A5 838 aa8.88□□□□□ -0.99
CDK5RAP3-209ENST00000578663 IVNS1ABPQ9Y6Y0 642 aa8.88□□□□□ -0.99
CDK5RAP3-209ENST00000578663 ROBO3Q96MS0 1386 aa8.87□□□□□ -0.99
CDK5RAP3-209ENST00000578663 PTPRCP08575 1304 aa8.87□□□□□ -0.99
CDK5RAP3-209ENST00000578663 SMCHD1A6NHR9 2005 aa8.87□□□□□ -0.99
CDK5RAP3-209ENST00000578663 ASH1LQ9NR48 2969 aaKnown RBP8.87□□□□□ -0.99
CDK5RAP3-209ENST00000578663 KIAA0355O15063 1070 aa8.87□□□□□ -0.99
CDK5RAP3-209ENST00000578663 SEPT4O43236 478 aa8.87□□□□□ -0.99
CDK5RAP3-209ENST00000578663 PEX10O60683 326 aa8.87□□□□□ -0.99
CDK5RAP3-209ENST00000578663 CNGA1P29973 690 aa8.87□□□□□ -0.99
CDK5RAP3-209ENST00000578663 IL15P40933 162 aaPredicted RBP8.87□□□□□ -0.99
CDK5RAP3-209ENST00000578663 MECOMQ03112 1051 aa8.87□□□□□ -0.99
CDK5RAP3-209ENST00000578663 TLE2Q04725 743 aa8.87□□□□□ -0.99
CDK5RAP3-209ENST00000578663 TMEM240Q5SV17 173 aa8.87□□□□□ -0.99
CDK5RAP3-209ENST00000578663 GJC2Q5T442 439 aaPredicted RBP8.87□□□□□ -0.99
CDK5RAP3-209ENST00000578663 USP17L2Q6R6M4 530 aa8.87□□□□□ -0.99
CDK5RAP3-209ENST00000578663 ERICH6Q7L0X2 663 aa8.87□□□□□ -0.99
CDK5RAP3-209ENST00000578663 TRPV1Q8NER1 839 aa8.87□□□□□ -0.99
CDK5RAP3-209ENST00000578663 ZNF384Q8TF68 577 aa8.87□□□□□ -0.99
CDK5RAP3-209ENST00000578663 USP44Q9H0E7 712 aa8.87□□□□□ -0.99
CDK5RAP3-209ENST00000578663 SLC28A3Q9HAS3 691 aa8.87□□□□□ -0.99
CDK5RAP3-209ENST00000578663 ZBTB21Q9ULJ3 1066 aa8.87□□□□□ -0.99
CDK5RAP3-209ENST00000578663 SALL2Q9Y467 1007 aaPredicted RBP8.87□□□□□ -0.99
CDK5RAP3-209ENST00000578663 ZFYVE26Q68DK2 2539 aa8.87□□□□□ -0.99
CDK5RAP3-209ENST00000578663 USP17L15C9J2P7 530 aa8.86□□□□□ -0.99
CDK5RAP3-209ENST00000578663 USP17L13C9JLJ4 530 aa8.86□□□□□ -0.99
CDK5RAP3-209ENST00000578663 USP17L11C9JVI0 530 aa8.86□□□□□ -0.99
CDK5RAP3-209ENST00000578663 USP17L18D6R9N7 530 aa8.86□□□□□ -0.99
CDK5RAP3-209ENST00000578663 USP17L22D6RA61 530 aa8.86□□□□□ -0.99
CDK5RAP3-209ENST00000578663 USP17L17D6RBQ6 530 aa8.86□□□□□ -0.99
CDK5RAP3-209ENST00000578663 USP17L19D6RCP7 530 aa8.86□□□□□ -0.99
CDK5RAP3-209ENST00000578663 USP17L20D6RJB6 530 aa8.86□□□□□ -0.99
CDK5RAP3-209ENST00000578663 PROB1E7EW31 1015 aa8.86□□□□□ -0.99
CDK5RAP3-209ENST00000578663 CNMDO75829 334 aa8.86□□□□□ -0.99
CDK5RAP3-209ENST00000578663 CLTBP09497 229 aa8.86□□□□□ -0.99
CDK5RAP3-209ENST00000578663 IL9P15248 144 aa8.86□□□□□ -0.99
CDK5RAP3-209ENST00000578663 SSTR3P32745 418 aaPredicted RBP8.86□□□□□ -0.99
CDK5RAP3-209ENST00000578663 CYP2C19P33261 490 aa8.86□□□□□ -0.99
CDK5RAP3-209ENST00000578663 USP17L24Q0WX57 530 aa8.86□□□□□ -0.99
CDK5RAP3-209ENST00000578663 RAB30Q15771 203 aa8.86□□□□□ -0.99
CDK5RAP3-209ENST00000578663 TEX11Q8IYF3 940 aa8.86□□□□□ -0.99
CDK5RAP3-209ENST00000578663 DNAJC18Q9H819 358 aa8.86□□□□□ -0.99
CDK5RAP3-209ENST00000578663 EMILIN3Q9NT22 766 aa8.86□□□□□ -0.99
CDK5RAP3-209ENST00000578663 MSRAQ9UJ68 235 aa8.86□□□□□ -0.99
CDK5RAP3-209ENST00000578663 PHF24Q9UPV7 400 aa8.86□□□□□ -0.99
CDK5RAP3-209ENST00000578663 EP300Q09472 2414 aaPredicted RBP8.86□□□□□ -0.99
CDK5RAP3-209ENST00000578663 FOCADQ5VW36 1801 aa8.86□□□□□ -0.99
CDK5RAP3-209ENST00000578663 NAV2Q8IVL1 2488 aa8.86□□□□□ -0.99
CDK5RAP3-209ENST00000578663 PRR23AA6NEV1 266 aa8.85□□□□□ -0.99
CDK5RAP3-209ENST00000578663 EPOPA6NHQ4 379 aa8.85□□□□□ -0.99
CDK5RAP3-209ENST00000578663 STRNO43815 780 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms