RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 WDR18Q9BV38 432 aa14.24□□□□□ -0.13
IFT20-207ENST00000578547 LY9Q9HBG7 655 aa14.24□□□□□ -0.13
IFT20-207ENST00000578547 NYAP2Q9P242 653 aa14.24□□□□□ -0.13
IFT20-207ENST00000578547 PHIPQ8WWQ0 1821 aa14.24□□□□□ -0.13
IFT20-207ENST00000578547 WDR33Q9C0J8 1336 aaKnown RBP14.23□□□□□ -0.13
IFT20-207ENST00000578547 CCDC69A6NI79 296 aa14.23□□□□□ -0.13
IFT20-207ENST00000578547 ZBTB48P10074 688 aaPredicted RBP14.23□□□□□ -0.13
IFT20-207ENST00000578547 TOP1P11387 765 aaKnown RBP14.23□□□□□ -0.13
IFT20-207ENST00000578547 DGKHQ86XP1 1220 aa14.23□□□□□ -0.13
IFT20-207ENST00000578547 LARP6Q9BRS8 491 aaKnown RBP14.23□□□□□ -0.13
IFT20-207ENST00000578547 SH2D4AQ9H788 454 aa14.23□□□□□ -0.13
IFT20-207ENST00000578547 ISY1Q9ULR0 285 aaKnown RBP14.23□□□□□ -0.13
IFT20-207ENST00000578547 KCNH4Q9UQ05 1017 aa14.23□□□□□ -0.13
IFT20-207ENST00000578547 KLF18A0A0U1RQI7 1052 aa14.22□□□□□ -0.13
IFT20-207ENST00000578547 USP17L10C9JJH3 530 aa14.22□□□□□ -0.13
IFT20-207ENST00000578547 CXCL11O14625 94 aa14.22□□□□□ -0.13
IFT20-207ENST00000578547 AK2P54819 239 aa14.22□□□□□ -0.13
IFT20-207ENST00000578547 KIF23Q02241 960 aaPredicted RBP14.22□□□□□ -0.13
IFT20-207ENST00000578547 APOBRQ0VD83 1088 aa14.22□□□□□ -0.13
IFT20-207ENST00000578547 DGKZQ13574 1117 aa14.22□□□□□ -0.13
IFT20-207ENST00000578547 TOB2Q14106 344 aaPredicted RBP14.22□□□□□ -0.13
IFT20-207ENST00000578547 RAB11FIP4Q86YS3 637 aa14.22□□□□□ -0.13
IFT20-207ENST00000578547 SPICE1Q8N0Z3 855 aa14.22□□□□□ -0.13
IFT20-207ENST00000578547 DNAJC5GQ8N7S2 189 aa14.22□□□□□ -0.13
IFT20-207ENST00000578547 PNMA1Q8ND90 353 aa14.22□□□□□ -0.13
IFT20-207ENST00000578547 MS4A4AQ96JQ5 239 aa14.22□□□□□ -0.13
IFT20-207ENST00000578547 TTC14Q96N46 770 aa14.22□□□□□ -0.13
IFT20-207ENST00000578547 MTA3Q9BTC8 594 aa14.22□□□□□ -0.13
IFT20-207ENST00000578547 MYL10Q9BUA6 226 aa14.22□□□□□ -0.13
IFT20-207ENST00000578547 TBC1D2Q9BYX2 928 aa14.22□□□□□ -0.13
IFT20-207ENST00000578547 GOPCQ9HD26 462 aa14.22□□□□□ -0.13
IFT20-207ENST00000578547 ST18O60284 1047 aa14.21□□□□□ -0.13
IFT20-207ENST00000578547 LIFRP42702 1097 aa14.21□□□□□ -0.13
IFT20-207ENST00000578547 NOVP48745 357 aa14.21□□□□□ -0.13
IFT20-207ENST00000578547 HMGCS2P54868 508 aa14.21□□□□□ -0.13
IFT20-207ENST00000578547 NOGQ13253 232 aa14.21□□□□□ -0.13
IFT20-207ENST00000578547 SNAPC2Q13487 334 aa14.21□□□□□ -0.13
IFT20-207ENST00000578547 RASGRP2Q7LDG7 609 aa14.21□□□□□ -0.13
IFT20-207ENST00000578547 CATIPQ7Z7H3 387 aa14.21□□□□□ -0.13
IFT20-207ENST00000578547 ZNF654Q8IZM8 581 aa14.21□□□□□ -0.13
IFT20-207ENST00000578547 NUP133Q8WUM0 1156 aa14.21□□□□□ -0.13
IFT20-207ENST00000578547 ANKS1AQ92625 1134 aa14.21□□□□□ -0.13
IFT20-207ENST00000578547 KIAA1683Q9H0B3 1180 aa14.21□□□□□ -0.13
IFT20-207ENST00000578547 BRPF3Q9ULD4 1205 aa14.21□□□□□ -0.13
IFT20-207ENST00000578547 TMX2Q9Y320 296 aa14.21□□□□□ -0.13
IFT20-207ENST00000578547 SLC12A7Q9Y666 1083 aa14.21□□□□□ -0.13
IFT20-207ENST00000578547 GOLGA8BA8MQT2 603 aa14.2□□□□□ -0.14
IFT20-207ENST00000578547 NDUFB10O96000 172 aa14.2□□□□□ -0.14
IFT20-207ENST00000578547 RXRAP19793 462 aa14.2□□□□□ -0.14
IFT20-207ENST00000578547 GTF2A2P52657 109 aa14.2□□□□□ -0.14
IFT20-207ENST00000578547 USP14P54578 494 aa14.2□□□□□ -0.14
IFT20-207ENST00000578547 BACE1P56817 501 aa14.2□□□□□ -0.14
IFT20-207ENST00000578547 MOGSQ13724 837 aa14.2□□□□□ -0.14
IFT20-207ENST00000578547 ANKRD1Q15327 319 aa14.2□□□□□ -0.14
IFT20-207ENST00000578547 CCDC96Q2M329 555 aa14.2□□□□□ -0.14
IFT20-207ENST00000578547 USP17L2Q6R6M4 530 aa14.2□□□□□ -0.14
IFT20-207ENST00000578547 SYNE3Q6ZMZ3 975 aa14.2□□□□□ -0.14
IFT20-207ENST00000578547 GADL1Q6ZQY3 521 aa14.2□□□□□ -0.14
IFT20-207ENST00000578547 MICU3Q86XE3 530 aa14.2□□□□□ -0.14
IFT20-207ENST00000578547 CCDC144CPQ8IYA2 1237 aa14.2□□□□□ -0.14
IFT20-207ENST00000578547 TMTC2Q8N394 836 aa14.2□□□□□ -0.14
IFT20-207ENST00000578547 BRI3BPQ8WY22 251 aa14.2□□□□□ -0.14
IFT20-207ENST00000578547 MKL1Q969V6 931 aa14.2□□□□□ -0.14
IFT20-207ENST00000578547 VCPKMTQ9H867 229 aa14.2□□□□□ -0.14
IFT20-207ENST00000578547 TMOD4Q9NZQ9 345 aa14.2□□□□□ -0.14
IFT20-207ENST00000578547 CCL15-CCL14A0A0B4J2E2 113 aa14.19□□□□□ -0.14
IFT20-207ENST00000578547 A0A0G2JLL6 359 aaPredicted RBP14.19□□□□□ -0.14
IFT20-207ENST00000578547 MANSC4A6NHS7 340 aaPredicted RBP14.19□□□□□ -0.14
IFT20-207ENST00000578547 C19orf81C9J6K1 198 aa14.19□□□□□ -0.14
IFT20-207ENST00000578547 F5H6K3 240 aa14.19□□□□□ -0.14
IFT20-207ENST00000578547 ZBTB43O43298 467 aa14.19□□□□□ -0.14
IFT20-207ENST00000578547 CETPP11597 493 aa14.19□□□□□ -0.14
IFT20-207ENST00000578547 KLRC3Q07444 240 aa14.19□□□□□ -0.14
IFT20-207ENST00000578547 CCL15Q16663 113 aa14.19□□□□□ -0.14
IFT20-207ENST00000578547 SH3D19Q5HYK7 790 aa14.19□□□□□ -0.14
IFT20-207ENST00000578547 KIAA1755Q5JYT7 1200 aa14.19□□□□□ -0.14
IFT20-207ENST00000578547 SLFN13Q68D06 897 aa14.19□□□□□ -0.14
IFT20-207ENST00000578547 APOA5Q6Q788 366 aa14.19□□□□□ -0.14
IFT20-207ENST00000578547 PRRT2Q7Z6L0 340 aaPredicted RBP14.19□□□□□ -0.14
IFT20-207ENST00000578547 SGMS1Q86VZ5 419 aa14.19□□□□□ -0.14
IFT20-207ENST00000578547 GMCL1P1Q8NEA9 526 aa14.19□□□□□ -0.14
IFT20-207ENST00000578547 NUP88Q99567 741 aaPredicted RBP14.19□□□□□ -0.14
IFT20-207ENST00000578547 AGXT2Q9BYV1 514 aa14.19□□□□□ -0.14
IFT20-207ENST00000578547 EMILIN3Q9NT22 766 aa14.19□□□□□ -0.14
IFT20-207ENST00000578547 FRMPD2Q68DX3 1309 aaPredicted RBP14.18□□□□□ -0.14
IFT20-207ENST00000578547 PTPRFP10586 1907 aa14.18□□□□□ -0.14
IFT20-207ENST00000578547 TESPA1A2RU30 521 aaPredicted RBP14.18□□□□□ -0.14
IFT20-207ENST00000578547 DDAH1O94760 285 aa14.18□□□□□ -0.14
IFT20-207ENST00000578547 CD2BP2O95400 341 aaKnown RBP14.18□□□□□ -0.14
IFT20-207ENST00000578547 MAP2K2P36507 400 aa14.18□□□□□ -0.14
IFT20-207ENST00000578547 SLC1A4P43007 532 aa14.18□□□□□ -0.14
IFT20-207ENST00000578547 STK3Q13188 491 aa14.18□□□□□ -0.14
IFT20-207ENST00000578547 FBXL16Q8N461 479 aa14.18□□□□□ -0.14
IFT20-207ENST00000578547 PTPN18Q99952 460 aa14.18□□□□□ -0.14
IFT20-207ENST00000578547 ALDH8A1Q9H2A2 487 aaPredicted RBP14.18□□□□□ -0.14
IFT20-207ENST00000578547 SYNPO2Q9UMS6 1093 aa14.18□□□□□ -0.14
IFT20-207ENST00000578547 LOC285556D6RIA3 1793 aa14.18□□□□□ -0.14
IFT20-207ENST00000578547 GOLGA8AA7E2F4 631 aa14.17□□□□□ -0.14
IFT20-207ENST00000578547 GOLGA8HP0CJ92 632 aa14.17□□□□□ -0.14
IFT20-207ENST00000578547 CALM1P0DP23 149 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms