RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 ENGASEQ8NFI3 743 aa12.77□□□□□ -0.37
SKA2-204ENST00000578519 C7orf43Q8WVR3 580 aa12.77□□□□□ -0.37
SKA2-204ENST00000578519 TMEM47Q9BQJ4 181 aa12.77□□□□□ -0.37
SKA2-204ENST00000578519 FUCA2Q9BTY2 467 aa12.77□□□□□ -0.37
SKA2-204ENST00000578519 OSBPL5Q9H0X9 879 aaPredicted RBP12.77□□□□□ -0.37
SKA2-204ENST00000578519 DBNDD1Q9H9R9 158 aa12.77□□□□□ -0.37
SKA2-204ENST00000578519 CCDC39Q9UFE4 941 aa12.77□□□□□ -0.37
SKA2-204ENST00000578519 SEC63Q9UGP8 760 aaKnown RBP12.77□□□□□ -0.37
SKA2-204ENST00000578519 KCNJ14Q9UNX9 436 aa12.77□□□□□ -0.37
SKA2-204ENST00000578519 CNTNAP5Q8WYK1 1306 aa12.77□□□□□ -0.37
SKA2-204ENST00000578519 LTBP1Q14766 1721 aa12.76□□□□□ -0.37
SKA2-204ENST00000578519 GOLGA6L6A8MZA4 724 aa12.76□□□□□ -0.37
SKA2-204ENST00000578519 GOLGA6L19H0YKK7 550 aa12.76□□□□□ -0.37
SKA2-204ENST00000578519 PLEKHA8P1O95397 391 aa12.76□□□□□ -0.37
SKA2-204ENST00000578519 GUCY1A2P33402 732 aa12.76□□□□□ -0.37
SKA2-204ENST00000578519 SYKP43405 635 aa12.76□□□□□ -0.37
SKA2-204ENST00000578519 PKN1Q16512 942 aa12.76□□□□□ -0.37
SKA2-204ENST00000578519 ASPRV1Q53RT3 343 aa12.76□□□□□ -0.37
SKA2-204ENST00000578519 DACT2Q5SW24 774 aa12.76□□□□□ -0.37
SKA2-204ENST00000578519 CDC42EP5Q6NZY7 148 aa12.76□□□□□ -0.37
SKA2-204ENST00000578519 FMR1NBQ8N0W7 255 aaPredicted RBP12.76□□□□□ -0.37
SKA2-204ENST00000578519 CERS5Q8N5B7 392 aa12.76□□□□□ -0.37
SKA2-204ENST00000578519 FERMT2Q96AC1 680 aa12.76□□□□□ -0.37
SKA2-204ENST00000578519 RRP36Q96EU6 259 aaKnown RBP12.76□□□□□ -0.37
SKA2-204ENST00000578519 SPZ1Q9BXG8 430 aa12.76□□□□□ -0.37
SKA2-204ENST00000578519 IDI2Q9BXS1 227 aa12.76□□□□□ -0.37
SKA2-204ENST00000578519 IL17RBQ9NRM6 502 aa12.76□□□□□ -0.37
SKA2-204ENST00000578519 VPS54Q9P1Q0 977 aa12.76□□□□□ -0.37
SKA2-204ENST00000578519 PI4KBQ9UBF8 816 aa12.76□□□□□ -0.37
SKA2-204ENST00000578519 PLIN4Q96Q06 1357 aa12.76□□□□□ -0.37
SKA2-204ENST00000578519 MYH2Q9UKX2 1941 aa12.76□□□□□ -0.37
SKA2-204ENST00000578519 FAM237AA0A1B0GTK4 181 aa12.75□□□□□ -0.37
SKA2-204ENST00000578519 PALM3A6NDB9 673 aaPredicted RBP12.75□□□□□ -0.37
SKA2-204ENST00000578519 NMT2O60551 498 aa12.75□□□□□ -0.37
SKA2-204ENST00000578519 ENTPD3O75355 529 aa12.75□□□□□ -0.37
SKA2-204ENST00000578519 ZNF202O95125 648 aa12.75□□□□□ -0.37
SKA2-204ENST00000578519 TTLL1O95922 423 aa12.75□□□□□ -0.37
SKA2-204ENST00000578519 PTMAP06454 111 aaKnown RBP12.75□□□□□ -0.37
SKA2-204ENST00000578519 GNA11P29992 359 aa12.75□□□□□ -0.37
SKA2-204ENST00000578519 NOVP48745 357 aa12.75□□□□□ -0.37
SKA2-204ENST00000578519 SCNN1DP51172 638 aa12.75□□□□□ -0.37
SKA2-204ENST00000578519 GABPAQ06546 454 aa12.75□□□□□ -0.37
SKA2-204ENST00000578519 PTPAQ15257 358 aa12.75□□□□□ -0.37
SKA2-204ENST00000578519 CKAP2LQ8IYA6 745 aa12.75□□□□□ -0.37
SKA2-204ENST00000578519 OGFOD1Q8N543 542 aa12.75□□□□□ -0.37
SKA2-204ENST00000578519 FTOQ9C0B1 505 aaKnown RBP eCLIP12.75□□□□□ -0.37
SKA2-204ENST00000578519 CABP5Q9NP86 173 aa12.75□□□□□ -0.37
SKA2-204ENST00000578519 GJB4Q9NTQ9 266 aa12.75□□□□□ -0.37
SKA2-204ENST00000578519 USP25Q9UHP3 1055 aa12.75□□□□□ -0.37
SKA2-204ENST00000578519 BAZ2AQ9UIF9 1905 aaKnown RBP12.75□□□□□ -0.37
SKA2-204ENST00000578519 SRPRBQ9Y5M8 271 aaKnown RBP12.75□□□□□ -0.37
SKA2-204ENST00000578519 A0A1B0GVL5 298 aa12.74□□□□□ -0.37
SKA2-204ENST00000578519 BECN2A8MW95 431 aa12.74□□□□□ -0.37
SKA2-204ENST00000578519 KLRF2D3W0D1 207 aa12.74□□□□□ -0.37
SKA2-204ENST00000578519 C21orf2O43822 256 aa12.74□□□□□ -0.37
SKA2-204ENST00000578519 WDHD1O75717 1129 aaPredicted RBP12.74□□□□□ -0.37
SKA2-204ENST00000578519 ATXN8OSP0DMR3 200 aa12.74□□□□□ -0.37
SKA2-204ENST00000578519 PTPREP23469 700 aa12.74□□□□□ -0.37
SKA2-204ENST00000578519 MARCKSP29966 332 aaPredicted RBP12.74□□□□□ -0.37
SKA2-204ENST00000578519 SNW1Q13573 536 aaKnown RBP12.74□□□□□ -0.37
SKA2-204ENST00000578519 AOC3Q16853 763 aa12.74□□□□□ -0.37
SKA2-204ENST00000578519 SLC4A8Q2Y0W8 1093 aa12.74□□□□□ -0.37
SKA2-204ENST00000578519 RESP18Q5W5W9 173 aa12.74□□□□□ -0.37
SKA2-204ENST00000578519 APOBEC3HQ6NTF7 200 aaKnown RBP12.74□□□□□ -0.37
SKA2-204ENST00000578519 KIAA0825Q8IV33 1275 aa12.74□□□□□ -0.37
SKA2-204ENST00000578519 ZSCAN29Q8IWY8 852 aaPredicted RBP12.74□□□□□ -0.37
SKA2-204ENST00000578519 CEP57L1Q8IYX8 460 aa12.74□□□□□ -0.37
SKA2-204ENST00000578519 BLIDQ8IZY5 108 aa12.74□□□□□ -0.37
SKA2-204ENST00000578519 CMTR1Q8N1G2 835 aaKnown RBP12.74□□□□□ -0.37
SKA2-204ENST00000578519 PDLIM2Q96JY6 352 aa12.74□□□□□ -0.37
SKA2-204ENST00000578519 C6orf50Q9HD87 102 aa12.74□□□□□ -0.37
SKA2-204ENST00000578519 MTMR4Q9NYA4 1195 aa12.74□□□□□ -0.37
SKA2-204ENST00000578519 PIM2Q9P1W9 311 aa12.74□□□□□ -0.37
SKA2-204ENST00000578519 MAD2L2Q9UI95 211 aa12.74□□□□□ -0.37
SKA2-204ENST00000578519 NAV1Q8NEY1 1877 aa12.74□□□□□ -0.37
SKA2-204ENST00000578519 DLEC1Q9Y238 1755 aa12.74□□□□□ -0.37
SKA2-204ENST00000578519 C10orf71Q711Q0 1435 aa12.73□□□□□ -0.37
SKA2-204ENST00000578519 CCDC194A0A1B0GVG4 234 aa12.73□□□□□ -0.37
SKA2-204ENST00000578519 SMTNL1A8MU46 457 aa12.73□□□□□ -0.37
SKA2-204ENST00000578519 SMIM22K7EJ46 135 aa12.73□□□□□ -0.37
SKA2-204ENST00000578519 PFKFB1P16118 471 aa12.73□□□□□ -0.37
SKA2-204ENST00000578519 MSNP26038 577 aaKnown RBP12.73□□□□□ -0.37
SKA2-204ENST00000578519 ZNF165P49910 485 aa12.73□□□□□ -0.37
SKA2-204ENST00000578519 NDUFA8P51970 172 aa12.73□□□□□ -0.37
SKA2-204ENST00000578519 ANO6Q4KMQ2 910 aa12.73□□□□□ -0.37
SKA2-204ENST00000578519 AXDND1Q5T1B0 1012 aaPredicted RBP12.73□□□□□ -0.37
SKA2-204ENST00000578519 GPATCH4Q5T3I0 446 aaKnown RBP12.73□□□□□ -0.37
SKA2-204ENST00000578519 OLFM4Q6UX06 510 aa12.73□□□□□ -0.37
SKA2-204ENST00000578519 SLC51AQ86UW1 340 aa12.73□□□□□ -0.37
SKA2-204ENST00000578519 NIM1KQ8IY84 436 aa12.73□□□□□ -0.37
SKA2-204ENST00000578519 LARGE2Q8N3Y3 721 aa12.73□□□□□ -0.37
SKA2-204ENST00000578519 DAGLBQ8NCG7 672 aa12.73□□□□□ -0.37
SKA2-204ENST00000578519 SLC44A5Q8NCS7 719 aa12.73□□□□□ -0.37
SKA2-204ENST00000578519 GLT8D2Q9H1C3 349 aa12.73□□□□□ -0.37
SKA2-204ENST00000578519 GOLPH3LQ9H4A5 285 aa12.73□□□□□ -0.37
SKA2-204ENST00000578519 KIAA1468Q9P260 1216 aa12.73□□□□□ -0.37
SKA2-204ENST00000578519 PCDHA4Q9UN74 947 aa12.73□□□□□ -0.37
SKA2-204ENST00000578519 ZBTB12Q9Y330 459 aaPredicted RBP12.73□□□□□ -0.37
SKA2-204ENST00000578519 MRVI1Q9Y6F6 885 aa12.73□□□□□ -0.37
SKA2-204ENST00000578519 TRAF1Q13077 416 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms