RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 SMARCC1Q92922 1105 aaPredicted RBP3.49□□□□□ -1.85
PTP4A1-204ENST00000578299 SLC6A18Q96N87 628 aa3.49□□□□□ -1.85
PTP4A1-204ENST00000578299 TNKS2Q9H2K2 1166 aa3.49□□□□□ -1.85
PTP4A1-204ENST00000578299 BSDC1Q9NW68 430 aaPredicted RBP3.49□□□□□ -1.85
PTP4A1-204ENST00000578299 ACTR10Q9NZ32 417 aa3.49□□□□□ -1.85
PTP4A1-204ENST00000578299 ZC3H7BQ9UGR2 993 aaKnown RBP3.49□□□□□ -1.85
PTP4A1-204ENST00000578299 ZNF214Q9UL59 606 aaPredicted RBP3.49□□□□□ -1.85
PTP4A1-204ENST00000578299 R3HCC1Q9Y3T6 440 aaKnown RBP3.49□□□□□ -1.85
PTP4A1-204ENST00000578299 SNX11Q9Y5W9 270 aa3.49□□□□□ -1.85
PTP4A1-204ENST00000578299 CAPN6Q9Y6Q1 641 aa3.49□□□□□ -1.85
PTP4A1-204ENST00000578299 U3KQE9 123 aa3.49□□□□□ -1.85
PTP4A1-204ENST00000578299 LTBP3Q9NS15 1303 aa3.48□□□□□ -1.85
PTP4A1-204ENST00000578299 FAM86C2PA6NEL3 165 aa3.48□□□□□ -1.85
PTP4A1-204ENST00000578299 KIAA1324LA8MWY0 1029 aaPredicted RBP3.48□□□□□ -1.85
PTP4A1-204ENST00000578299 PRR33A8MZF0 331 aa3.48□□□□□ -1.85
PTP4A1-204ENST00000578299 LRRN2O75325 713 aa3.48□□□□□ -1.85
PTP4A1-204ENST00000578299 PRNPP04156 253 aa3.48□□□□□ -1.85
PTP4A1-204ENST00000578299 SSTR4P31391 388 aa3.48□□□□□ -1.85
PTP4A1-204ENST00000578299 GTF2F1P35269 517 aaKnown RBP eCLIP3.48□□□□□ -1.853e-7■■□□□ 13.2
PTP4A1-204ENST00000578299 SLC7A5Q01650 507 aa3.48□□□□□ -1.85
PTP4A1-204ENST00000578299 NKPD1Q17RQ9 610 aa3.48□□□□□ -1.85
PTP4A1-204ENST00000578299 ANKS3Q6ZW76 656 aa3.48□□□□□ -1.85
PTP4A1-204ENST00000578299 THAP5Q7Z6K1 395 aa3.48□□□□□ -1.85
PTP4A1-204ENST00000578299 DTX1Q86Y01 620 aa3.48□□□□□ -1.85
PTP4A1-204ENST00000578299 SPACA3Q8IXA5 215 aa3.48□□□□□ -1.85
PTP4A1-204ENST00000578299 CCDC144CPQ8IYA2 1237 aa3.48□□□□□ -1.85
PTP4A1-204ENST00000578299 CKAP2LQ8IYA6 745 aa3.48□□□□□ -1.85
PTP4A1-204ENST00000578299 STK11IPQ8N1F8 1099 aa3.48□□□□□ -1.85
PTP4A1-204ENST00000578299 PLD6Q8N2A8 252 aaKnown RBP3.48□□□□□ -1.85
PTP4A1-204ENST00000578299 DTWD2Q8NBA8 298 aa3.48□□□□□ -1.85
PTP4A1-204ENST00000578299 MISP3Q96FF7 219 aa3.48□□□□□ -1.85
PTP4A1-204ENST00000578299 Q96M66 194 aa3.48□□□□□ -1.85
PTP4A1-204ENST00000578299 DRC1Q96MC2 740 aa3.48□□□□□ -1.85
PTP4A1-204ENST00000578299 HIRIP3Q9BW71 556 aaPredicted RBP3.48□□□□□ -1.85
PTP4A1-204ENST00000578299 MKRN2Q9H000 416 aaKnown RBP3.48□□□□□ -1.85
PTP4A1-204ENST00000578299 PPP1R1BQ9UD71 204 aaPredicted RBP3.48□□□□□ -1.85
PTP4A1-204ENST00000578299 PLAGL2Q9UPG8 496 aa3.48□□□□□ -1.85
PTP4A1-204ENST00000578299 MED26O95402 600 aa3.47□□□□□ -1.85
PTP4A1-204ENST00000578299 SPINK2P20155 84 aa3.47□□□□□ -1.85
PTP4A1-204ENST00000578299 PRKCQQ04759 706 aa3.47□□□□□ -1.85
PTP4A1-204ENST00000578299 TNK2Q07912 1038 aa3.47□□□□□ -1.85
PTP4A1-204ENST00000578299 AUHQ13825 339 aaKnown RBP3.47□□□□□ -1.85
PTP4A1-204ENST00000578299 LRP8Q14114 963 aa3.47□□□□□ -1.85
PTP4A1-204ENST00000578299 NCAPHQ15003 741 aa3.47□□□□□ -1.85
PTP4A1-204ENST00000578299 FXNQ16595 210 aa3.47□□□□□ -1.85
PTP4A1-204ENST00000578299 NBPF9Q3BBW0 867 aa3.47□□□□□ -1.85
PTP4A1-204ENST00000578299 GNPTABQ3T906 1256 aa3.47□□□□□ -1.85
PTP4A1-204ENST00000578299 SOGA3Q5TF21 947 aa3.47□□□□□ -1.85
PTP4A1-204ENST00000578299 CDKAL1Q5VV42 579 aa3.47□□□□□ -1.85
PTP4A1-204ENST00000578299 NBPF6Q5VWK0 638 aa3.47□□□□□ -1.85
PTP4A1-204ENST00000578299 LARP1BQ659C4 914 aaKnown RBP3.47□□□□□ -1.85
PTP4A1-204ENST00000578299 VHLLQ6RSH7 139 aa3.47□□□□□ -1.85
PTP4A1-204ENST00000578299 C7orf61Q8IZ16 206 aa3.47□□□□□ -1.85
PTP4A1-204ENST00000578299 ENOX1Q8TC92 643 aaKnown RBP3.47□□□□□ -1.85
PTP4A1-204ENST00000578299 DHX38Q92620 1227 aaKnown RBP3.47□□□□□ -1.85
PTP4A1-204ENST00000578299 ZNF512BQ96KM6 892 aaPredicted RBP3.47□□□□□ -1.85
PTP4A1-204ENST00000578299 HRASLS5Q96KN8 279 aa3.47□□□□□ -1.85
PTP4A1-204ENST00000578299 NBPF4Q96M43 638 aa3.47□□□□□ -1.85
PTP4A1-204ENST00000578299 HSPA12BQ96MM6 686 aa3.47□□□□□ -1.85
PTP4A1-204ENST00000578299 GPR62Q9BZJ7 368 aa3.47□□□□□ -1.85
PTP4A1-204ENST00000578299 ASCC2Q9H1I8 757 aaPredicted RBP3.47□□□□□ -1.85
PTP4A1-204ENST00000578299 TRIT1Q9H3H1 467 aaKnown RBP3.47□□□□□ -1.85
PTP4A1-204ENST00000578299 GPATCH2Q9NW75 528 aa3.47□□□□□ -1.85
PTP4A1-204ENST00000578299 PRR13Q9NZ81 148 aa3.47□□□□□ -1.85
PTP4A1-204ENST00000578299 VAV3Q9UKW4 847 aa3.47□□□□□ -1.85
PTP4A1-204ENST00000578299 PCDHB12Q9Y5F1 795 aa3.47□□□□□ -1.85
PTP4A1-204ENST00000578299 ST14Q9Y5Y6 855 aa3.47□□□□□ -1.85
PTP4A1-204ENST00000578299 C9IYK1 514 aa3.46□□□□□ -1.86
PTP4A1-204ENST00000578299 KLF4O43474 513 aa3.46□□□□□ -1.86
PTP4A1-204ENST00000578299 TP53P04637 393 aaPredicted RBP3.46□□□□□ -1.86
PTP4A1-204ENST00000578299 NAT2P11245 290 aa3.46□□□□□ -1.86
PTP4A1-204ENST00000578299 SRFP11831 508 aa3.46□□□□□ -1.86
PTP4A1-204ENST00000578299 RBL2Q08999 1139 aa3.46□□□□□ -1.86
PTP4A1-204ENST00000578299 RAB33AQ14088 237 aa3.46□□□□□ -1.86
PTP4A1-204ENST00000578299 AOC3Q16853 763 aa3.46□□□□□ -1.86
PTP4A1-204ENST00000578299 ANKRD39Q53RE8 183 aa3.46□□□□□ -1.86
PTP4A1-204ENST00000578299 TDRD10Q5VZ19 366 aaKnown RBP3.46□□□□□ -1.86
PTP4A1-204ENST00000578299 VSIG10LQ86VR7 867 aa3.46□□□□□ -1.86
PTP4A1-204ENST00000578299 PPFIBP1Q86W92 1011 aa3.46□□□□□ -1.86
PTP4A1-204ENST00000578299 HNRNPLLQ8WVV9 542 aaKnown RBP3.46□□□□□ -1.86
PTP4A1-204ENST00000578299 ASB11Q8WXH4 323 aa3.46□□□□□ -1.86
PTP4A1-204ENST00000578299 UBXN4Q92575 508 aa3.46□□□□□ -1.86
PTP4A1-204ENST00000578299 UBE2FQ969M7 185 aa3.46□□□□□ -1.86
PTP4A1-204ENST00000578299 TRIM55Q9BYV6 548 aa3.46□□□□□ -1.86
PTP4A1-204ENST00000578299 DUSP15Q9H1R2 295 aaPredicted RBP3.46□□□□□ -1.86
PTP4A1-204ENST00000578299 PCMTD2Q9NV79 361 aa3.46□□□□□ -1.86
PTP4A1-204ENST00000578299 CCDC39Q9UFE4 941 aa3.46□□□□□ -1.86
PTP4A1-204ENST00000578299 FBXL21Q9UKT6 434 aa3.46□□□□□ -1.86
PTP4A1-204ENST00000578299 PCDHB10Q9UN67 800 aa3.46□□□□□ -1.86
PTP4A1-204ENST00000578299 SLC5A6Q9Y289 635 aa3.46□□□□□ -1.86
PTP4A1-204ENST00000578299 PITPNM2Q9BZ72 1349 aa3.45□□□□□ -1.86
PTP4A1-204ENST00000578299 SCO2A0A1W2PP80 73 aa3.45□□□□□ -1.86
PTP4A1-204ENST00000578299 H3BS24 57 aa3.45□□□□□ -1.86
PTP4A1-204ENST00000578299 U2SURPO15042 1029 aaKnown RBP3.45□□□□□ -1.86
PTP4A1-204ENST00000578299 SIGLEC6O43699 453 aa3.45□□□□□ -1.86
PTP4A1-204ENST00000578299 ZNF143P52747 638 aaPredicted RBP3.45□□□□□ -1.86
PTP4A1-204ENST00000578299 NMIQ13287 307 aaPredicted RBP3.45□□□□□ -1.86
PTP4A1-204ENST00000578299 TCEAL1Q15170 157 aa3.45□□□□□ -1.86
PTP4A1-204ENST00000578299 DDR2Q16832 855 aa3.45□□□□□ -1.86
PTP4A1-204ENST00000578299 CLEC16AQ2KHT3 1053 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms