RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 ANKRD13AQ8IZ07 590 aa13.17□□□□□ -0.3
TRAPPC8-204ENST00000578252 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.17□□□□□ -0.3
TRAPPC8-204ENST00000578252 TMEM87BQ96K49 555 aa13.17□□□□□ -0.3
TRAPPC8-204ENST00000578252 UBAC1Q9BSL1 405 aa13.17□□□□□ -0.3
TRAPPC8-204ENST00000578252 TBC1D2Q9BYX2 928 aa13.17□□□□□ -0.3
TRAPPC8-204ENST00000578252 ZNF408Q9H9D4 720 aa13.17□□□□□ -0.3
TRAPPC8-204ENST00000578252 GBA2Q9HCG7 927 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC8-204ENST00000578252 INCENPQ9NQS7 918 aa13.17□□□□□ -0.3
TRAPPC8-204ENST00000578252 ZSWIM5Q9P217 1185 aa13.17□□□□□ -0.3
TRAPPC8-204ENST00000578252 ZBTB21Q9ULJ3 1066 aa13.17□□□□□ -0.3
TRAPPC8-204ENST00000578252 ANGEL1Q9UNK9 670 aaKnown RBP13.17□□□□□ -0.3
TRAPPC8-204ENST00000578252 CSADQ9Y600 493 aa13.17□□□□□ -0.3
TRAPPC8-204ENST00000578252 PASKQ96RG2 1323 aa13.16□□□□□ -0.3
TRAPPC8-204ENST00000578252 PRC1O43663 620 aa13.16□□□□□ -0.3
TRAPPC8-204ENST00000578252 CELF2O95319 508 aaKnown RBP13.16□□□□□ -0.3
TRAPPC8-204ENST00000578252 AKR1B1P15121 316 aa13.16□□□□□ -0.3
TRAPPC8-204ENST00000578252 MAP3K9P80192 1104 aa13.16□□□□□ -0.3
TRAPPC8-204ENST00000578252 FAM47AQ5JRC9 791 aa13.16□□□□□ -0.3
TRAPPC8-204ENST00000578252 POTEEQ6S8J3 1075 aa13.16□□□□□ -0.3
TRAPPC8-204ENST00000578252 DLK2Q6UY11 383 aa13.16□□□□□ -0.3
TRAPPC8-204ENST00000578252 SCYL3Q8IZE3 742 aa13.16□□□□□ -0.3
TRAPPC8-204ENST00000578252 ZSCAN10Q96SZ4 725 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC8-204ENST00000578252 KANSL2Q9H9L4 492 aa13.16□□□□□ -0.3
TRAPPC8-204ENST00000578252 PICK1Q9NRD5 415 aa13.16□□□□□ -0.3
TRAPPC8-204ENST00000578252 IGKV6D-41A0A0C4DH26 115 aa13.15□□□□□ -0.3
TRAPPC8-204ENST00000578252 GDF11O95390 407 aa13.15□□□□□ -0.3
TRAPPC8-204ENST00000578252 GH2P01242 217 aa13.15□□□□□ -0.3
TRAPPC8-204ENST00000578252 SLURP2P0DP57 97 aa13.15□□□□□ -0.3
TRAPPC8-204ENST00000578252 INPP5BP32019 993 aa13.15□□□□□ -0.3
TRAPPC8-204ENST00000578252 LSM11P83369 360 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRAPPC8-204ENST00000578252 FGD1P98174 961 aa13.15□□□□□ -0.3
TRAPPC8-204ENST00000578252 EXOSC10Q01780 885 aaKnown RBP13.15□□□□□ -0.3
TRAPPC8-204ENST00000578252 PRKG1Q13976 671 aa13.15□□□□□ -0.3
TRAPPC8-204ENST00000578252 ANKRD1Q15327 319 aa13.15□□□□□ -0.3
TRAPPC8-204ENST00000578252 CYB5R4Q7L1T6 521 aa13.15□□□□□ -0.3
TRAPPC8-204ENST00000578252 DGKHQ86XP1 1220 aa13.15□□□□□ -0.3
TRAPPC8-204ENST00000578252 TMTC2Q8N394 836 aa13.15□□□□□ -0.3
TRAPPC8-204ENST00000578252 FBXL16Q8N461 479 aa13.15□□□□□ -0.3
TRAPPC8-204ENST00000578252 TTC14Q96N46 770 aa13.15□□□□□ -0.3
TRAPPC8-204ENST00000578252 KIF2CQ99661 725 aa13.15□□□□□ -0.3
TRAPPC8-204ENST00000578252 ALDH8A1Q9H2A2 487 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC8-204ENST00000578252 SH2D4AQ9H788 454 aa13.15□□□□□ -0.3
TRAPPC8-204ENST00000578252 SYNPO2Q9UMS6 1093 aa13.15□□□□□ -0.3
TRAPPC8-204ENST00000578252 MYH4Q9Y623 1939 aa13.15□□□□□ -0.3
TRAPPC8-204ENST00000578252 TNKSO95271 1327 aa13.14□□□□□ -0.31
TRAPPC8-204ENST00000578252 USP17L5A8MUK1 530 aa13.14□□□□□ -0.31
TRAPPC8-204ENST00000578252 IFIT3O14879 490 aaKnown RBP13.14□□□□□ -0.31
TRAPPC8-204ENST00000578252 NEK4P51957 841 aa13.14□□□□□ -0.31
TRAPPC8-204ENST00000578252 ANTXR2P58335 489 aa13.14□□□□□ -0.31
TRAPPC8-204ENST00000578252 ICA1Q05084 483 aa13.14□□□□□ -0.31
TRAPPC8-204ENST00000578252 RRP1BQ14684 758 aaKnown RBP13.14□□□□□ -0.31
TRAPPC8-204ENST00000578252 TMEM67Q5HYA8 995 aa13.14□□□□□ -0.31
TRAPPC8-204ENST00000578252 LDLRAD1Q5T700 205 aa13.14□□□□□ -0.31
TRAPPC8-204ENST00000578252 CEP95Q96GE4 821 aa13.14□□□□□ -0.31
TRAPPC8-204ENST00000578252 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.14□□□□□ -0.31
TRAPPC8-204ENST00000578252 UPF3BQ9BZI7 483 aaKnown RBP13.14□□□□□ -0.31
TRAPPC8-204ENST00000578252 AS3MTQ9HBK9 375 aa13.14□□□□□ -0.31
TRAPPC8-204ENST00000578252 ARHGEF10LQ9HCE6 1279 aa13.14□□□□□ -0.31
TRAPPC8-204ENST00000578252 PDRG1Q9NUG6 133 aa13.14□□□□□ -0.31
TRAPPC8-204ENST00000578252 MTMR4Q9NYA4 1195 aa13.14□□□□□ -0.31
TRAPPC8-204ENST00000578252 NYAP2Q9P242 653 aa13.14□□□□□ -0.31
TRAPPC8-204ENST00000578252 PHIPQ8WWQ0 1821 aa13.13□□□□□ -0.31
TRAPPC8-204ENST00000578252 SH2B2O14492 632 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC8-204ENST00000578252 TTLL1O95922 423 aa13.13□□□□□ -0.31
TRAPPC8-204ENST00000578252 LIFRP42702 1097 aa13.13□□□□□ -0.31
TRAPPC8-204ENST00000578252 NOVP48745 357 aa13.13□□□□□ -0.31
TRAPPC8-204ENST00000578252 FMR1Q06787 632 aaKnown RBP eCLIP13.13□□□□□ -0.31
TRAPPC8-204ENST00000578252 VGLL4Q14135 290 aa13.13□□□□□ -0.31
TRAPPC8-204ENST00000578252 WTAPQ15007 396 aa13.13□□□□□ -0.31
TRAPPC8-204ENST00000578252 SEPT2Q15019 361 aa13.13□□□□□ -0.31
TRAPPC8-204ENST00000578252 RAB3GAP1Q15042 981 aa13.13□□□□□ -0.31
TRAPPC8-204ENST00000578252 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC8-204ENST00000578252 ERO1BQ86YB8 467 aa13.13□□□□□ -0.31
TRAPPC8-204ENST00000578252 ANKS1AQ92625 1134 aa13.13□□□□□ -0.31
TRAPPC8-204ENST00000578252 ZKSCAN4Q969J2 545 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC8-204ENST00000578252 AGXT2Q9BYV1 514 aa13.13□□□□□ -0.31
TRAPPC8-204ENST00000578252 IL17RBQ9NRM6 502 aa13.13□□□□□ -0.31
TRAPPC8-204ENST00000578252 EMILIN3Q9NT22 766 aa13.13□□□□□ -0.31
TRAPPC8-204ENST00000578252 STX8Q9UNK0 236 aa13.13□□□□□ -0.31
TRAPPC8-204ENST00000578252 SNCAIPQ9Y6H5 919 aa13.13□□□□□ -0.31
TRAPPC8-204ENST00000578252 TOP1P11387 765 aaKnown RBP13.12□□□□□ -0.31
TRAPPC8-204ENST00000578252 CPA1P15085 419 aa13.12□□□□□ -0.31
TRAPPC8-204ENST00000578252 PTPRAP18433 802 aa13.12□□□□□ -0.31
TRAPPC8-204ENST00000578252 GUCY1A2P33402 732 aa13.12□□□□□ -0.31
TRAPPC8-204ENST00000578252 MCM2P49736 904 aa13.12□□□□□ -0.31
TRAPPC8-204ENST00000578252 SEC23AQ15436 765 aa13.12□□□□□ -0.31
TRAPPC8-204ENST00000578252 IFIT1BQ5T764 474 aaKnown RBP13.12□□□□□ -0.31
TRAPPC8-204ENST00000578252 CST9Q5W186 159 aa13.12□□□□□ -0.31
TRAPPC8-204ENST00000578252 CHST3Q7LGC8 479 aa13.12□□□□□ -0.31
TRAPPC8-204ENST00000578252 SGMS1Q86VZ5 419 aa13.12□□□□□ -0.31
TRAPPC8-204ENST00000578252 ENAHQ8N8S7 591 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC8-204ENST00000578252 IGDCC4Q8TDY8 1250 aa13.12□□□□□ -0.31
TRAPPC8-204ENST00000578252 MKL1Q969V6 931 aa13.12□□□□□ -0.31
TRAPPC8-204ENST00000578252 ZKSCAN3Q9BRR0 538 aa13.12□□□□□ -0.31
TRAPPC8-204ENST00000578252 WDR18Q9BV38 432 aa13.12□□□□□ -0.31
TRAPPC8-204ENST00000578252 KAT14Q9H8E8 782 aa13.12□□□□□ -0.31
TRAPPC8-204ENST00000578252 FZD1Q9UP38 647 aa13.12□□□□□ -0.31
TRAPPC8-204ENST00000578252 CCDC69A6NI79 296 aa13.11□□□□□ -0.31
TRAPPC8-204ENST00000578252 SPDYE5A6NIY4 337 aa13.11□□□□□ -0.31
TRAPPC8-204ENST00000578252 TMEM88BA6NKF7 163 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms