RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 USP17L20D6RJB6 530 aa15.27■□□□□ 0.04
CCDC57-211ENST00000578187 H0YGN5 161 aa15.27■□□□□ 0.04
CCDC57-211ENST00000578187 GSPT1P15170 499 aaKnown RBP15.27■□□□□ 0.04
CCDC57-211ENST00000578187 ERVK-9P63128 1117 aa15.27■□□□□ 0.04
CCDC57-211ENST00000578187 ERVK-24P63145 666 aa15.27■□□□□ 0.04
CCDC57-211ENST00000578187 CCNA1P78396 465 aa15.27■□□□□ 0.04
CCDC57-211ENST00000578187 JAG1P78504 1218 aa15.27■□□□□ 0.04
CCDC57-211ENST00000578187 USP17L24Q0WX57 530 aa15.27■□□□□ 0.04
CCDC57-211ENST00000578187 ZYXQ15942 572 aaKnown RBP15.27■□□□□ 0.04
CCDC57-211ENST00000578187 SBK1Q52WX2 424 aa15.27■□□□□ 0.04
CCDC57-211ENST00000578187 TTC22Q5TAA0 569 aa15.27■□□□□ 0.04
CCDC57-211ENST00000578187 C12orf60Q5U649 245 aa15.27■□□□□ 0.04
CCDC57-211ENST00000578187 RILPL2Q969X0 211 aa15.27■□□□□ 0.04
CCDC57-211ENST00000578187 C12orf42Q96LP6 360 aa15.27■□□□□ 0.04
CCDC57-211ENST00000578187 PAGR1Q9BTK6 254 aa15.27■□□□□ 0.04
CCDC57-211ENST00000578187 HMX1Q9NP08 348 aaPredicted RBP15.27■□□□□ 0.04
CCDC57-211ENST00000578187 PAK6Q9NQU5 681 aaPredicted RBP15.27■□□□□ 0.04
CCDC57-211ENST00000578187 HELLSQ9NRZ9 838 aa15.27■□□□□ 0.04
CCDC57-211ENST00000578187 CYP2D7A0A087X1C5 515 aa15.26■□□□□ 0.03
CCDC57-211ENST00000578187 A0A0D9SFI3 127 aa15.26■□□□□ 0.03
CCDC57-211ENST00000578187 MPHOSPH10O00566 681 aaKnown RBP15.26■□□□□ 0.03
CCDC57-211ENST00000578187 SHROOM1Q2M3G4 852 aaPredicted RBP15.26■□□□□ 0.03
CCDC57-211ENST00000578187 CTR9Q6PD62 1173 aa15.26■□□□□ 0.03
CCDC57-211ENST00000578187 FAM227BQ96M60 508 aa15.26■□□□□ 0.03
CCDC57-211ENST00000578187 KIAA1683Q9H0B3 1180 aa15.26■□□□□ 0.03
CCDC57-211ENST00000578187 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.26■□□□□ 0.03
CCDC57-211ENST00000578187 EMILIN3Q9NT22 766 aa15.26■□□□□ 0.03
CCDC57-211ENST00000578187 SWAP70Q9UH65 585 aa15.26■□□□□ 0.03
CCDC57-211ENST00000578187 RPTORQ8N122 1335 aa15.25■□□□□ 0.03
CCDC57-211ENST00000578187 PATL2C9JE40 543 aaKnown RBP15.25■□□□□ 0.03
CCDC57-211ENST00000578187 FOXP2O15409 715 aa15.25■□□□□ 0.03
CCDC57-211ENST00000578187 XRCC5P13010 732 aaKnown RBP15.25■□□□□ 0.03
CCDC57-211ENST00000578187 SDSP20132 328 aa15.25■□□□□ 0.03
CCDC57-211ENST00000578187 RGS2P41220 211 aa15.25■□□□□ 0.03
CCDC57-211ENST00000578187 NMIQ13287 307 aaPredicted RBP15.25■□□□□ 0.03
CCDC57-211ENST00000578187 CCDC129Q6ZRS4 1044 aa15.25■□□□□ 0.03
CCDC57-211ENST00000578187 C16orf86Q6ZW13 317 aa15.25■□□□□ 0.03
CCDC57-211ENST00000578187 ANKLE1Q8NAG6 615 aa15.25■□□□□ 0.03
CCDC57-211ENST00000578187 SLC44A5Q8NCS7 719 aa15.25■□□□□ 0.03
CCDC57-211ENST00000578187 GJD2Q9UKL4 321 aa15.25■□□□□ 0.03
CCDC57-211ENST00000578187 RABGAP1Q9Y3P9 1069 aa15.25■□□□□ 0.03
CCDC57-211ENST00000578187 SMIM22K7EJ46 135 aa15.24■□□□□ 0.03
CCDC57-211ENST00000578187 EVI5O60447 810 aa15.24■□□□□ 0.03
CCDC57-211ENST00000578187 ZKSCAN1P17029 563 aaPredicted RBP15.24■□□□□ 0.03
CCDC57-211ENST00000578187 VCAM1P19320 739 aa15.24■□□□□ 0.03
CCDC57-211ENST00000578187 CYP2B6P20813 491 aa15.24■□□□□ 0.03
CCDC57-211ENST00000578187 MCMDC2Q4G0Z9 681 aa15.24■□□□□ 0.03
CCDC57-211ENST00000578187 NECAB2Q7Z6G3 386 aa15.24■□□□□ 0.03
CCDC57-211ENST00000578187 PLEKHH3Q7Z736 793 aa15.24■□□□□ 0.03
CCDC57-211ENST00000578187 UBE2Q1Q7Z7E8 422 aa15.24■□□□□ 0.03
CCDC57-211ENST00000578187 DYNLL2Q96FJ2 89 aa15.24■□□□□ 0.03
CCDC57-211ENST00000578187 SH2D4AQ9H788 454 aa15.24■□□□□ 0.03
CCDC57-211ENST00000578187 TXNRD2Q9NNW7 524 aa15.24■□□□□ 0.03
CCDC57-211ENST00000578187 RBPJLQ9UBG7 517 aa15.24■□□□□ 0.03
CCDC57-211ENST00000578187 COLQQ9Y215 455 aaPredicted RBP15.24■□□□□ 0.03
CCDC57-211ENST00000578187 HIP1O00291 1037 aa15.23■□□□□ 0.03
CCDC57-211ENST00000578187 TDO2P48775 406 aa15.23■□□□□ 0.03
CCDC57-211ENST00000578187 WDR78Q5VTH9 848 aa15.23■□□□□ 0.03
CCDC57-211ENST00000578187 CATSPERGQ6ZRH7 1159 aa15.23■□□□□ 0.03
CCDC57-211ENST00000578187 TMEM179Q6ZVK1 233 aa15.23■□□□□ 0.03
CCDC57-211ENST00000578187 GPR142Q7Z601 462 aa15.23■□□□□ 0.03
CCDC57-211ENST00000578187 IFNL3Q8IZI9 196 aa15.23■□□□□ 0.03
CCDC57-211ENST00000578187 CCDC136Q96JN2 1154 aa15.23■□□□□ 0.03
CCDC57-211ENST00000578187 APBA2Q99767 749 aa15.23■□□□□ 0.03
CCDC57-211ENST00000578187 NACAP1Q9BZK3 213 aa15.23■□□□□ 0.03
CCDC57-211ENST00000578187 CRISPLD2Q9H0B8 497 aa15.23■□□□□ 0.03
CCDC57-211ENST00000578187 IVNS1ABPQ9Y6Y0 642 aa15.23■□□□□ 0.03
CCDC57-211ENST00000578187 CCDC171Q6TFL3 1326 aa15.22■□□□□ 0.03
CCDC57-211ENST00000578187 APPP05067 770 aa15.22■□□□□ 0.03
CCDC57-211ENST00000578187 GUCY1A2P33402 732 aa15.22■□□□□ 0.03
CCDC57-211ENST00000578187 CDK8P49336 464 aa15.22■□□□□ 0.03
CCDC57-211ENST00000578187 SEPT2Q15019 361 aa15.22■□□□□ 0.03
CCDC57-211ENST00000578187 VPS53Q5VIR6 699 aa15.22■□□□□ 0.03
CCDC57-211ENST00000578187 ZNF589Q86UQ0 364 aaPredicted RBP15.22■□□□□ 0.03
CCDC57-211ENST00000578187 TRIB2Q92519 343 aa15.22■□□□□ 0.03
CCDC57-211ENST00000578187 NAPBQ9H115 298 aa15.22■□□□□ 0.03
CCDC57-211ENST00000578187 RPAP3Q9H6T3 665 aaPredicted RBP15.22■□□□□ 0.03
CCDC57-211ENST00000578187 ARHGEF10LQ9HCE6 1279 aa15.22■□□□□ 0.03
CCDC57-211ENST00000578187 MYH4Q9Y623 1939 aa15.21■□□□□ 0.03
CCDC57-211ENST00000578187 ZMYM6O95789 1325 aa15.21■□□□□ 0.03
CCDC57-211ENST00000578187 PRKAR2AP13861 404 aaKnown RBP15.21■□□□□ 0.03
CCDC57-211ENST00000578187 ERICH6BQ5W0A0 696 aa15.21■□□□□ 0.03
CCDC57-211ENST00000578187 CHRDL2Q6WN34 429 aa15.21■□□□□ 0.03
CCDC57-211ENST00000578187 LBX2Q6XYB7 198 aa15.21■□□□□ 0.03
CCDC57-211ENST00000578187 ACER1Q8TDN7 264 aa15.21■□□□□ 0.03
CCDC57-211ENST00000578187 PAWRQ96IZ0 340 aaKnown RBP15.21■□□□□ 0.03
CCDC57-211ENST00000578187 CCDC17Q96LX7 622 aa15.21■□□□□ 0.03
CCDC57-211ENST00000578187 TANGO6Q9C0B7 1094 aa15.21■□□□□ 0.03
CCDC57-211ENST00000578187 PORCNQ9H237 461 aa15.21■□□□□ 0.03
CCDC57-211ENST00000578187 DIAPH3Q9NSV4 1193 aa15.21■□□□□ 0.03
CCDC57-211ENST00000578187 HOXC10Q9NYD6 342 aa15.21■□□□□ 0.03
CCDC57-211ENST00000578187 PLXNB2O15031 1838 aa15.21■□□□□ 0.03
CCDC57-211ENST00000578187 PARP14Q460N5 1801 aa15.2■□□□□ 0.02
CCDC57-211ENST00000578187 MINDY4BA8MYZ0 360 aa15.2■□□□□ 0.02
CCDC57-211ENST00000578187 AKR1B1P15121 316 aa15.2■□□□□ 0.02
CCDC57-211ENST00000578187 ALX1Q15699 326 aa15.2■□□□□ 0.02
CCDC57-211ENST00000578187 Q3C1V9 767 aa15.2■□□□□ 0.02
CCDC57-211ENST00000578187 LPAR1Q92633 364 aa15.2■□□□□ 0.02
CCDC57-211ENST00000578187 NBPF3Q9H094 633 aa15.2■□□□□ 0.02
CCDC57-211ENST00000578187 DOCK3Q8IZD9 2030 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms