RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 WDR78Q5VTH9 848 aa19.28■□□□□ 0.68
VAPA-204ENST00000577901 RIOK1Q9BRS2 568 aaKnown RBP19.28■□□□□ 0.68
VAPA-204ENST00000577901 PTPREP23469 700 aa19.27■□□□□ 0.68
VAPA-204ENST00000577901 ZSCAN25Q6NSZ9 544 aa19.27■□□□□ 0.68
VAPA-204ENST00000577901 SLC17A8Q8NDX2 589 aa19.27■□□□□ 0.68
VAPA-204ENST00000577901 BTBD7Q9P203 1132 aa19.27■□□□□ 0.68
VAPA-204ENST00000577901 ZNF532Q9HCE3 1301 aa19.26■□□□□ 0.67
VAPA-204ENST00000577901 MAGEB6P1A0A0J9YX57 407 aa19.26■□□□□ 0.67
VAPA-204ENST00000577901 SLC15A5A6NIM6 579 aa19.26■□□□□ 0.67
VAPA-204ENST00000577901 POLR3DP05423 398 aaPredicted RBP19.26■□□□□ 0.67
VAPA-204ENST00000577901 IRX6P78412 446 aaPredicted RBP19.26■□□□□ 0.67
VAPA-204ENST00000577901 LRRC26Q2I0M4 334 aa19.26■□□□□ 0.67
VAPA-204ENST00000577901 MFSD14CQ5VZR4 134 aa19.26■□□□□ 0.67
VAPA-204ENST00000577901 GPR153Q6NV75 609 aa19.26■□□□□ 0.67
VAPA-204ENST00000577901 LBX2Q6XYB7 198 aa19.26■□□□□ 0.67
VAPA-204ENST00000577901 TDHQ8IZJ6 230 aa19.26■□□□□ 0.67
VAPA-204ENST00000577901 UBE2OQ9C0C9 1292 aaKnown RBP19.26■□□□□ 0.67
VAPA-204ENST00000577901 RPAP3Q9H6T3 665 aaPredicted RBP19.26■□□□□ 0.67
VAPA-204ENST00000577901 FLRT1Q9NZU1 646 aa19.26■□□□□ 0.67
VAPA-204ENST00000577901 DNAH12Q6ZR08 3092 aa19.25■□□□□ 0.67
VAPA-204ENST00000577901 IGHDP01880 384 aa19.25■□□□□ 0.67
VAPA-204ENST00000577901 MX1P20591 662 aa19.25■□□□□ 0.67
VAPA-204ENST00000577901 GUCY1A2P33402 732 aa19.25■□□□□ 0.67
VAPA-204ENST00000577901 LRIT3Q3SXY7 679 aa19.25■□□□□ 0.67
VAPA-204ENST00000577901 SMC5Q8IY18 1101 aa19.25■□□□□ 0.67
VAPA-204ENST00000577901 TCRBV5S4A2TA0A5A2 114 aa19.24■□□□□ 0.67
VAPA-204ENST00000577901 SPDYE16A6NNV3 312 aaPredicted RBP19.24■□□□□ 0.67
VAPA-204ENST00000577901 ADD2P35612 726 aa19.24■□□□□ 0.67
VAPA-204ENST00000577901 ATP2B2Q01814 1243 aa19.24■□□□□ 0.67
VAPA-204ENST00000577901 GABPAQ06546 454 aa19.24■□□□□ 0.67
VAPA-204ENST00000577901 GRB14Q14449 540 aa19.24■□□□□ 0.67
VAPA-204ENST00000577901 SEPT2Q15019 361 aa19.24■□□□□ 0.67
VAPA-204ENST00000577901 TSHZ3Q63HK5 1081 aa19.24■□□□□ 0.67
VAPA-204ENST00000577901 CRNKL1Q9BZJ0 848 aaKnown RBP19.24■□□□□ 0.67
VAPA-204ENST00000577901 IVNS1ABPQ9Y6Y0 642 aa19.24■□□□□ 0.67
VAPA-204ENST00000577901 HOXC6P09630 235 aa19.23■□□□□ 0.67
VAPA-204ENST00000577901 UBE3CQ15386 1083 aa19.23■□□□□ 0.67
VAPA-204ENST00000577901 LRRFIP1Q32MZ4 808 aaKnown RBP19.23■□□□□ 0.67
VAPA-204ENST00000577901 B4GALNT3Q6L9W6 998 aa19.23■□□□□ 0.67
VAPA-204ENST00000577901 DEFB123Q8N688 67 aa19.23■□□□□ 0.67
VAPA-204ENST00000577901 OTUD7AQ8TE49 926 aaPredicted RBP19.23■□□□□ 0.67
VAPA-204ENST00000577901 MCM9Q9NXL9 1143 aa19.23■□□□□ 0.67
VAPA-204ENST00000577901 DDX20Q9UHI6 824 aaKnown RBP19.23■□□□□ 0.67
VAPA-204ENST00000577901 MPHOSPH10O00566 681 aaKnown RBP19.22■□□□□ 0.67
VAPA-204ENST00000577901 CNGA1P29973 690 aa19.22■□□□□ 0.67
VAPA-204ENST00000577901 EVX2Q03828 476 aa19.22■□□□□ 0.67
VAPA-204ENST00000577901 KBTBD3Q8NAB2 608 aa19.22■□□□□ 0.67
VAPA-204ENST00000577901 NPLOC4Q8TAT6 608 aa19.22■□□□□ 0.67
VAPA-204ENST00000577901 A0A1W2PRG0 241 aa19.21■□□□□ 0.67
VAPA-204ENST00000577901 MSCO60682 206 aa19.21■□□□□ 0.67
VAPA-204ENST00000577901 CYP2C19P33261 490 aa19.21■□□□□ 0.67
VAPA-204ENST00000577901 COG2Q14746 738 aa19.21■□□□□ 0.67
VAPA-204ENST00000577901 Q7L0L9 218 aa19.21■□□□□ 0.67
VAPA-204ENST00000577901 NAV1Q8NEY1 1877 aa19.21■□□□□ 0.67
VAPA-204ENST00000577901 PI4K2BQ8TCG2 481 aa19.21■□□□□ 0.67
VAPA-204ENST00000577901 LPAR1Q92633 364 aa19.21■□□□□ 0.67
VAPA-204ENST00000577901 LNPKQ9C0E8 428 aa19.21■□□□□ 0.67
VAPA-204ENST00000577901 SENP6Q9GZR1 1112 aaPredicted RBP19.21■□□□□ 0.67
VAPA-204ENST00000577901 HOXC10Q9NYD6 342 aa19.21■□□□□ 0.67
VAPA-204ENST00000577901 A0A0C4DFX4 3053 aa19.2■□□□□ 0.66
VAPA-204ENST00000577901 DLL1O00548 723 aa19.2■□□□□ 0.66
VAPA-204ENST00000577901 MDM2Q00987 491 aaPredicted RBP19.2■□□□□ 0.66
VAPA-204ENST00000577901 CHD1LQ86WJ1 897 aa19.2■□□□□ 0.66
VAPA-204ENST00000577901 LCORLQ8N3X6 602 aa19.2■□□□□ 0.66
VAPA-204ENST00000577901 SDR42E1Q8WUS8 393 aa19.2■□□□□ 0.66
VAPA-204ENST00000577901 MOV10L1Q9BXT6 1211 aaKnown RBP19.2■□□□□ 0.66
VAPA-204ENST00000577901 TANGO6Q9C0B7 1094 aa19.2■□□□□ 0.66
VAPA-204ENST00000577901 FRMPD3Q5JV73 1810 aa19.19■□□□□ 0.66
VAPA-204ENST00000577901 ZFYP08048 801 aaPredicted RBP19.19■□□□□ 0.66
VAPA-204ENST00000577901 CYP2D6P10635 497 aa19.19■□□□□ 0.66
VAPA-204ENST00000577901 NUCB1Q02818 461 aa19.19■□□□□ 0.66
VAPA-204ENST00000577901 DPP9Q86TI2 863 aa19.19■□□□□ 0.66
VAPA-204ENST00000577901 TRPV1Q8NER1 839 aa19.19■□□□□ 0.66
VAPA-204ENST00000577901 DCP1AQ9NPI6 582 aaPredicted RBP19.19■□□□□ 0.66
VAPA-204ENST00000577901 SALL3Q9BXA9 1300 aa19.19■□□□□ 0.66
VAPA-204ENST00000577901 DNM1LO00429 736 aa19.18■□□□□ 0.66
VAPA-204ENST00000577901 STRNO43815 780 aa19.18■□□□□ 0.66
VAPA-204ENST00000577901 MBD4O95243 580 aa19.18■□□□□ 0.66
VAPA-204ENST00000577901 IGHA2P01877 340 aa19.18■□□□□ 0.66
VAPA-204ENST00000577901 ADORA2AP29274 412 aa19.18■□□□□ 0.66
VAPA-204ENST00000577901 PDE1AP54750 535 aa19.18■□□□□ 0.66
VAPA-204ENST00000577901 SLFNL1Q499Z3 407 aa19.18■□□□□ 0.66
VAPA-204ENST00000577901 TMEM179Q6ZVK1 233 aa19.18■□□□□ 0.66
VAPA-204ENST00000577901 SLC44A5Q8NCS7 719 aa19.18■□□□□ 0.66
VAPA-204ENST00000577901 SPATC1LQ9H0A9 340 aa19.18■□□□□ 0.66
VAPA-204ENST00000577901 ARMT1Q9H993 441 aa19.18■□□□□ 0.66
VAPA-204ENST00000577901 SWAP70Q9UH65 585 aa19.18■□□□□ 0.66
VAPA-204ENST00000577901 LAMA2P24043 3122 aaKnown RBP19.17■□□□□ 0.66
VAPA-204ENST00000577901 RNF113AO15541 343 aaKnown RBP19.17■□□□□ 0.66
VAPA-204ENST00000577901 CYBAP13498 195 aa19.17■□□□□ 0.66
VAPA-204ENST00000577901 ATN1P54259 1190 aaPredicted RBP19.17■□□□□ 0.66
VAPA-204ENST00000577901 KIAA1755Q5JYT7 1200 aa19.17■□□□□ 0.66
VAPA-204ENST00000577901 OLFML2BQ68BL8 750 aa19.17■□□□□ 0.66
VAPA-204ENST00000577901 SHCBP1Q8NEM2 672 aa19.17■□□□□ 0.66
VAPA-204ENST00000577901 DDRGK1Q96HY6 314 aa19.17■□□□□ 0.66
VAPA-204ENST00000577901 LBHD1Q9BQE6 289 aaPredicted RBP19.17■□□□□ 0.66
VAPA-204ENST00000577901 MTMR10Q9NXD2 777 aa19.17■□□□□ 0.66
VAPA-204ENST00000577901 STXBP5LQ9Y2K9 1186 aa19.17■□□□□ 0.66
VAPA-204ENST00000577901 ERCC3P19447 782 aa19.16■□□□□ 0.66
VAPA-204ENST00000577901 MB21D1Q8N884 522 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms