RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 CEP95Q96GE4 821 aa14.58□□□□□ -0.08
RARA-208ENST00000577646 PTPN18Q99952 460 aa14.58□□□□□ -0.08
RARA-208ENST00000577646 USP26Q9BXU7 913 aa14.58□□□□□ -0.08
RARA-208ENST00000577646 VCPKMTQ9H867 229 aa14.58□□□□□ -0.08
RARA-208ENST00000577646 ZFYVE28Q9HCC9 887 aa14.58□□□□□ -0.08
RARA-208ENST00000577646 CLIP2Q9UDT6 1046 aa14.58□□□□□ -0.08
RARA-208ENST00000577646 A0A1W2PRG0 241 aa14.57□□□□□ -0.08
RARA-208ENST00000577646 CCDC85CA6NKD9 419 aa14.57□□□□□ -0.08
RARA-208ENST00000577646 USP17L15C9J2P7 530 aa14.57□□□□□ -0.08
RARA-208ENST00000577646 USP17L13C9JLJ4 530 aa14.57□□□□□ -0.08
RARA-208ENST00000577646 USP17L11C9JVI0 530 aa14.57□□□□□ -0.08
RARA-208ENST00000577646 USP17L18D6R9N7 530 aa14.57□□□□□ -0.08
RARA-208ENST00000577646 USP17L22D6RA61 530 aa14.57□□□□□ -0.08
RARA-208ENST00000577646 USP17L17D6RBQ6 530 aa14.57□□□□□ -0.08
RARA-208ENST00000577646 USP17L19D6RCP7 530 aa14.57□□□□□ -0.08
RARA-208ENST00000577646 USP17L20D6RJB6 530 aa14.57□□□□□ -0.08
RARA-208ENST00000577646 IGF2BP3O00425 579 aaKnown RBP eCLIP14.57□□□□□ -0.08
RARA-208ENST00000577646 WDR46O15213 610 aaKnown RBP14.57□□□□□ -0.08
RARA-208ENST00000577646 KDM4AO75164 1064 aa14.57□□□□□ -0.08
RARA-208ENST00000577646 TBC1D8O95759 1140 aa14.57□□□□□ -0.08
RARA-208ENST00000577646 TOP1P11387 765 aaKnown RBP14.57□□□□□ -0.08
RARA-208ENST00000577646 MLLT1Q03111 559 aaPredicted RBP14.57□□□□□ -0.08
RARA-208ENST00000577646 USP17L24Q0WX57 530 aa14.57□□□□□ -0.08
RARA-208ENST00000577646 DGKZQ13574 1117 aa14.57□□□□□ -0.08
RARA-208ENST00000577646 SHROOM1Q2M3G4 852 aaPredicted RBP14.57□□□□□ -0.08
RARA-208ENST00000577646 RCSD1Q6JBY9 416 aa14.57□□□□□ -0.08
RARA-208ENST00000577646 GPAT2Q6NUI2 795 aa14.57□□□□□ -0.08
RARA-208ENST00000577646 TMTC2Q8N394 836 aa14.57□□□□□ -0.08
RARA-208ENST00000577646 ACER1Q8TDN7 264 aa14.57□□□□□ -0.08
RARA-208ENST00000577646 PARK7Q99497 189 aaKnown RBP14.57□□□□□ -0.08
RARA-208ENST00000577646 UBAC1Q9BSL1 405 aa14.57□□□□□ -0.08
RARA-208ENST00000577646 INCENPQ9NQS7 918 aa14.57□□□□□ -0.08
RARA-208ENST00000577646 IL17RBQ9NRM6 502 aa14.57□□□□□ -0.08
RARA-208ENST00000577646 EMILIN3Q9NT22 766 aa14.57□□□□□ -0.08
RARA-208ENST00000577646 ZSWIM5Q9P217 1185 aa14.57□□□□□ -0.08
RARA-208ENST00000577646 TACC3Q9Y6A5 838 aa14.57□□□□□ -0.08
RARA-208ENST00000577646 WDR19Q8NEZ3 1342 aa14.57□□□□□ -0.08
RARA-208ENST00000577646 ERICH2A1L162 156 aa14.56□□□□□ -0.08
RARA-208ENST00000577646 B4E1Z4 1266 aa14.56□□□□□ -0.08
RARA-208ENST00000577646 PDHXO00330 501 aa14.56□□□□□ -0.08
RARA-208ENST00000577646 PSMA5P28066 241 aa14.56□□□□□ -0.08
RARA-208ENST00000577646 MCM5P33992 734 aa14.56□□□□□ -0.08
RARA-208ENST00000577646 GCLCP48506 637 aaPredicted RBP14.56□□□□□ -0.08
RARA-208ENST00000577646 CCDC84Q86UT8 332 aaPredicted RBP14.56□□□□□ -0.08
RARA-208ENST00000577646 FAM43AQ8N2R8 423 aa14.56□□□□□ -0.08
RARA-208ENST00000577646 ZSCAN10Q96SZ4 725 aaPredicted RBP14.56□□□□□ -0.08
RARA-208ENST00000577646 HOXC10Q9NYD6 342 aa14.56□□□□□ -0.08
RARA-208ENST00000577646 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.56□□□□□ -0.08
RARA-208ENST00000577646 STX8Q9UNK0 236 aa14.56□□□□□ -0.08
RARA-208ENST00000577646 NEDD4P46934 1319 aa14.56□□□□□ -0.08
RARA-208ENST00000577646 MYPNQ86TC9 1320 aa14.56□□□□□ -0.08
RARA-208ENST00000577646 F5H6K3 240 aa14.55□□□□□ -0.08
RARA-208ENST00000577646 ANAPC15P60006 121 aa14.55□□□□□ -0.08
RARA-208ENST00000577646 ATP2B2Q01814 1243 aa14.55□□□□□ -0.08
RARA-208ENST00000577646 KLRC3Q07444 240 aa14.55□□□□□ -0.08
RARA-208ENST00000577646 TAF1CQ15572 869 aaPredicted RBP14.55□□□□□ -0.08
RARA-208ENST00000577646 IL27Q8NEV9 243 aa14.55□□□□□ -0.08
RARA-208ENST00000577646 GMCL1Q96IK5 515 aa14.55□□□□□ -0.08
RARA-208ENST00000577646 TMEM87BQ96K49 555 aa14.55□□□□□ -0.08
RARA-208ENST00000577646 MCOLN1Q9GZU1 580 aa14.55□□□□□ -0.08
RARA-208ENST00000577646 LOC285556D6RIA3 1793 aa14.55□□□□□ -0.08
RARA-208ENST00000577646 CASP8AP2Q9UKL3 1982 aa14.54□□□□□ -0.08
RARA-208ENST00000577646 TLR2O60603 784 aa14.54□□□□□ -0.08
RARA-208ENST00000577646 PLA2G6O60733 806 aa14.54□□□□□ -0.08
RARA-208ENST00000577646 FDX1P10109 184 aa14.54□□□□□ -0.08
RARA-208ENST00000577646 VCAM1P19320 739 aa14.54□□□□□ -0.08
RARA-208ENST00000577646 IRX3P78415 501 aaPredicted RBP14.54□□□□□ -0.08
RARA-208ENST00000577646 COG2Q14746 738 aa14.54□□□□□ -0.08
RARA-208ENST00000577646 ARHGEF6Q15052 776 aa14.54□□□□□ -0.08
RARA-208ENST00000577646 LBX2Q6XYB7 198 aa14.54□□□□□ -0.08
RARA-208ENST00000577646 CATSPERGQ6ZRH7 1159 aa14.54□□□□□ -0.08
RARA-208ENST00000577646 NEK1Q96PY6 1258 aa14.54□□□□□ -0.08
RARA-208ENST00000577646 TM6SF1Q9BZW5 370 aa14.54□□□□□ -0.08
RARA-208ENST00000577646 PTPRFP10586 1907 aa14.54□□□□□ -0.08
RARA-208ENST00000577646 GPR25O00155 361 aa14.53□□□□□ -0.08
RARA-208ENST00000577646 CTU1Q7Z7A3 348 aaKnown RBP14.53□□□□□ -0.08
RARA-208ENST00000577646 MB21D2Q8IYB1 491 aaPredicted RBP14.53□□□□□ -0.08
RARA-208ENST00000577646 ZNF296Q8WUU4 475 aaPredicted RBP14.53□□□□□ -0.08
RARA-208ENST00000577646 DCAF4Q8WV16 495 aa14.53□□□□□ -0.08
RARA-208ENST00000577646 TMEM47Q9BQJ4 181 aa14.53□□□□□ -0.08
RARA-208ENST00000577646 KAT14Q9H8E8 782 aa14.53□□□□□ -0.08
RARA-208ENST00000577646 TNKSO95271 1327 aa14.52□□□□□ -0.08
RARA-208ENST00000577646 IFIT3O14879 490 aaKnown RBP14.52□□□□□ -0.09
RARA-208ENST00000577646 LIFRP42702 1097 aa14.52□□□□□ -0.09
RARA-208ENST00000577646 C8orf34Q49A92 452 aa14.52□□□□□ -0.09
RARA-208ENST00000577646 TREML2Q5T2D2 321 aa14.52□□□□□ -0.09
RARA-208ENST00000577646 IFIT1BQ5T764 474 aaKnown RBP14.52□□□□□ -0.09
RARA-208ENST00000577646 SLFN13Q68D06 897 aa14.52□□□□□ -0.09
RARA-208ENST00000577646 STOX1Q6ZVD7 989 aa14.52□□□□□ -0.09
RARA-208ENST00000577646 DHX32Q7L7V1 743 aaKnown RBP14.52□□□□□ -0.09
RARA-208ENST00000577646 FBXL16Q8N461 479 aa14.52□□□□□ -0.09
RARA-208ENST00000577646 MB21D1Q8N884 522 aa14.52□□□□□ -0.09
RARA-208ENST00000577646 ENAHQ8N8S7 591 aaPredicted RBP14.52□□□□□ -0.09
RARA-208ENST00000577646 CHURC1Q8WUH1 139 aa14.52□□□□□ -0.09
RARA-208ENST00000577646 IL17RAQ96F46 866 aa14.52□□□□□ -0.09
RARA-208ENST00000577646 ASCC2Q9H1I8 757 aaPredicted RBP14.52□□□□□ -0.09
RARA-208ENST00000577646 RPAP3Q9H6T3 665 aaPredicted RBP14.52□□□□□ -0.09
RARA-208ENST00000577646 FEM1BQ9UK73 627 aa14.52□□□□□ -0.09
RARA-208ENST00000577646 TNRC18O15417 2968 aaPredicted RBP14.51□□□□□ -0.09
RARA-208ENST00000577646 NMT2O60551 498 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms