RNA–Protein interactions for RNA: ENST00000577498.1

IFT20-204, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-204ENST00000577498 ANP32EQ9BTT0 268 aa17.55■□□□□ 0.4
IFT20-204ENST00000577498 CLIP2Q9UDT6 1046 aa17.55■□□□□ 0.4
IFT20-204ENST00000577498 SLURP2P0DP57 97 aa17.54■□□□□ 0.4
IFT20-204ENST00000577498 XBP1P17861 261 aa17.54■□□□□ 0.4
IFT20-204ENST00000577498 FOSBP53539 338 aa17.54■□□□□ 0.4
IFT20-204ENST00000577498 SKOR2Q2VWA4 1001 aaPredicted RBP17.54■□□□□ 0.4
IFT20-204ENST00000577498 KRT40Q6A162 431 aa17.54■□□□□ 0.4
IFT20-204ENST00000577498 ATL3Q6DD88 541 aa17.54■□□□□ 0.4
IFT20-204ENST00000577498 BRAPQ7Z569 592 aa17.54■□□□□ 0.4
IFT20-204ENST00000577498 FERMT3Q86UX7 667 aa17.54■□□□□ 0.4
IFT20-204ENST00000577498 TMEM87AQ8NBN3 555 aa17.54■□□□□ 0.4
IFT20-204ENST00000577498 TRPM4Q8TD43 1214 aa17.54■□□□□ 0.4
IFT20-204ENST00000577498 SPZ1Q9BXG8 430 aa17.54■□□□□ 0.4
IFT20-204ENST00000577498 GINM1Q9NU53 330 aa17.54■□□□□ 0.4
IFT20-204ENST00000577498 PPP2R3BQ9Y5P8 575 aa17.54■□□□□ 0.4
IFT20-204ENST00000577498 PITPNM2Q9BZ72 1349 aa17.53■□□□□ 0.4
IFT20-204ENST00000577498 DDNO94850 711 aaPredicted RBP17.53■□□□□ 0.4
IFT20-204ENST00000577498 EEF2P13639 858 aaKnown RBP17.53■□□□□ 0.4
IFT20-204ENST00000577498 GUCY1A2P33402 732 aa17.53■□□□□ 0.4
IFT20-204ENST00000577498 EPS15P42566 896 aa17.53■□□□□ 0.4
IFT20-204ENST00000577498 ICA1Q05084 483 aa17.53■□□□□ 0.4
IFT20-204ENST00000577498 SEPT2Q15019 361 aa17.53■□□□□ 0.4
IFT20-204ENST00000577498 DPY19L2Q6NUT2 758 aa17.53■□□□□ 0.4
IFT20-204ENST00000577498 FAM177A1Q8N128 213 aaPredicted RBP17.53■□□□□ 0.4
IFT20-204ENST00000577498 CMTR1Q8N1G2 835 aaKnown RBP17.53■□□□□ 0.4
IFT20-204ENST00000577498 CCDC82Q8N4S0 544 aa17.53■□□□□ 0.4
IFT20-204ENST00000577498 L3MBTL3Q96JM7 780 aaPredicted RBP17.53■□□□□ 0.4
IFT20-204ENST00000577498 AIFM3Q96NN9 605 aa17.53■□□□□ 0.4
IFT20-204ENST00000577498 DEFB129Q9H1M3 183 aa17.53■□□□□ 0.4
IFT20-204ENST00000577498 ADARB2Q9NS39 739 aaKnown RBP17.53■□□□□ 0.4
IFT20-204ENST00000577498 V9GY48 417 aaPredicted RBP17.53■□□□□ 0.4
IFT20-204ENST00000577498 GDF11O95390 407 aa17.52■□□□□ 0.4
IFT20-204ENST00000577498 GH2P01242 217 aa17.52■□□□□ 0.4
IFT20-204ENST00000577498 PDHBP11177 359 aa17.52■□□□□ 0.4
IFT20-204ENST00000577498 KRT85P78386 507 aa17.52■□□□□ 0.4
IFT20-204ENST00000577498 GUCY1B3Q02153 619 aa17.52■□□□□ 0.4
IFT20-204ENST00000577498 KIF23Q02241 960 aaPredicted RBP17.52■□□□□ 0.4
IFT20-204ENST00000577498 PKN1Q16512 942 aa17.52■□□□□ 0.4
IFT20-204ENST00000577498 CLEC10AQ8IUN9 316 aa17.52■□□□□ 0.4
IFT20-204ENST00000577498 STAG2Q8N3U4 1231 aa17.52■□□□□ 0.4
IFT20-204ENST00000577498 DCAF4Q8WV16 495 aa17.52■□□□□ 0.4
IFT20-204ENST00000577498 LMBRD1Q9NUN5 540 aa17.52■□□□□ 0.4
IFT20-204ENST00000577498 ASTN2O75129 1339 aaPredicted RBP17.51■□□□□ 0.39
IFT20-204ENST00000577498 MYH6P13533 1939 aa17.51■□□□□ 0.39
IFT20-204ENST00000577498 MYH4Q9Y623 1939 aa17.51■□□□□ 0.39
IFT20-204ENST00000577498 USP17L5A8MUK1 530 aa17.51■□□□□ 0.39
IFT20-204ENST00000577498 KLRF2D3W0D1 207 aa17.51■□□□□ 0.39
IFT20-204ENST00000577498 DNM1Q05193 864 aaKnown RBP17.51■□□□□ 0.39
IFT20-204ENST00000577498 ZNF543Q08ER8 600 aa17.51■□□□□ 0.39
IFT20-204ENST00000577498 RRP1BQ14684 758 aaKnown RBP17.51■□□□□ 0.39
IFT20-204ENST00000577498 SAFBQ15424 915 aaKnown RBP eCLIP17.51■□□□□ 0.39
IFT20-204ENST00000577498 PFKFB3Q16875 520 aaPredicted RBP17.51■□□□□ 0.39
IFT20-204ENST00000577498 GPATCH4Q5T3I0 446 aaKnown RBP17.51■□□□□ 0.39
IFT20-204ENST00000577498 ANGEL2Q5VTE6 544 aaKnown RBP17.51■□□□□ 0.39
IFT20-204ENST00000577498 DCAF15Q66K64 600 aa17.51■□□□□ 0.39
IFT20-204ENST00000577498 OTUD7BQ6GQQ9 843 aa17.51■□□□□ 0.39
IFT20-204ENST00000577498 CDAN1Q8IWY9 1227 aa17.51■□□□□ 0.39
IFT20-204ENST00000577498 LRRC47Q8N1G4 583 aaKnown RBP17.51■□□□□ 0.39
IFT20-204ENST00000577498 GMCL1P1Q8NEA9 526 aa17.51■□□□□ 0.39
IFT20-204ENST00000577498 ZBTB21Q9ULJ3 1066 aa17.51■□□□□ 0.39
IFT20-204ENST00000577498 MMP1P03956 469 aa17.5■□□□□ 0.39
IFT20-204ENST00000577498 SCG2P13521 617 aa17.5■□□□□ 0.39
IFT20-204ENST00000577498 CAP2P40123 477 aa17.5■□□□□ 0.39
IFT20-204ENST00000577498 HIRAP54198 1017 aaPredicted RBP17.5■□□□□ 0.39
IFT20-204ENST00000577498 ATP2B2Q01814 1243 aa17.5■□□□□ 0.39
IFT20-204ENST00000577498 SIAH1Q8IUQ4 282 aa17.5■□□□□ 0.39
IFT20-204ENST00000577498 ZNF396Q96N95 335 aaPredicted RBP17.5■□□□□ 0.39
IFT20-204ENST00000577498 SCAND2PQ9GZW5 306 aaPredicted RBP17.5■□□□□ 0.39
IFT20-204ENST00000577498 ARHGEF10LQ9HCE6 1279 aa17.5■□□□□ 0.39
IFT20-204ENST00000577498 SH3GLB2Q9NR46 395 aa17.5■□□□□ 0.39
IFT20-204ENST00000577498 GGA3Q9NZ52 723 aa17.5■□□□□ 0.39
IFT20-204ENST00000577498 CNPY2Q9Y2B0 182 aa17.5■□□□□ 0.39
IFT20-204ENST00000577498 PHF20L1A8MW92 1017 aa17.49■□□□□ 0.39
IFT20-204ENST00000577498 UBE2Q2LH0YL09 131 aa17.49■□□□□ 0.39
IFT20-204ENST00000577498 PRPF40AO75400 957 aaKnown RBP17.49■□□□□ 0.39
IFT20-204ENST00000577498 ASNSP08243 561 aa17.49■□□□□ 0.39
IFT20-204ENST00000577498 NCLP19338 710 aaKnown RBP17.49■□□□□ 0.39
IFT20-204ENST00000577498 U2AF2P26368 475 aaKnown RBP eCLIP17.49■□□□□ 0.39
IFT20-204ENST00000577498 JAG1P78504 1218 aa17.49■□□□□ 0.39
IFT20-204ENST00000577498 FOXD4L6Q3SYB3 417 aaPredicted RBP17.49■□□□□ 0.39
IFT20-204ENST00000577498 USP17L2Q6R6M4 530 aa17.49■□□□□ 0.39
IFT20-204ENST00000577498 FOXD4L3Q6VB84 417 aaPredicted RBP17.49■□□□□ 0.39
IFT20-204ENST00000577498 MIGA2Q7L4E1 593 aa17.49■□□□□ 0.39
IFT20-204ENST00000577498 CHAMP1Q96JM3 812 aa17.49■□□□□ 0.39
IFT20-204ENST00000577498 RIOX1Q9H6W3 641 aa17.49■□□□□ 0.39
IFT20-204ENST00000577498 GJB4Q9NTQ9 266 aa17.49■□□□□ 0.39
IFT20-204ENST00000577498 CFAP45Q9UL16 551 aa17.49■□□□□ 0.39
IFT20-204ENST00000577498 MTMR7Q9Y216 660 aa17.49■□□□□ 0.39
IFT20-204ENST00000577498 ELP1O95163 1332 aa17.48■□□□□ 0.39
IFT20-204ENST00000577498 TRAK2O60296 914 aa17.48■□□□□ 0.39
IFT20-204ENST00000577498 CTNND1O60716 968 aaKnown RBP17.48■□□□□ 0.39
IFT20-204ENST00000577498 SHROOM1Q2M3G4 852 aaPredicted RBP17.48■□□□□ 0.39
IFT20-204ENST00000577498 SLC35G1Q2M3R5 365 aa17.48■□□□□ 0.39
IFT20-204ENST00000577498 SLFN13Q68D06 897 aa17.48■□□□□ 0.39
IFT20-204ENST00000577498 RRP36Q96EU6 259 aaKnown RBP17.48■□□□□ 0.39
IFT20-204ENST00000577498 GMCL1Q96IK5 515 aa17.48■□□□□ 0.39
IFT20-204ENST00000577498 PHF20Q9BVI0 1012 aa17.48■□□□□ 0.39
IFT20-204ENST00000577498 ZNF341Q9BYN7 854 aa17.48■□□□□ 0.39
IFT20-204ENST00000577498 FOXP1Q9H334 677 aaPredicted RBP17.48■□□□□ 0.39
IFT20-204ENST00000577498 SH2D4AQ9H788 454 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms