RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 MAP3K21Q5TCX8 1036 aa17.93■□□□□ 0.46
MKS1-205ENST00000577315 POTEEQ6S8J3 1075 aa17.93■□□□□ 0.46
MKS1-205ENST00000577315 NECAB2Q7Z6G3 386 aa17.93■□□□□ 0.46
MKS1-205ENST00000577315 SLC44A5Q8NCS7 719 aa17.93■□□□□ 0.46
MKS1-205ENST00000577315 TMX2Q9Y320 296 aa17.93■□□□□ 0.46
MKS1-205ENST00000577315 ALPK3Q96L96 1907 aa17.93■□□□□ 0.46
MKS1-205ENST00000577315 A0A0G2JMZ2 1700 aa17.92■□□□□ 0.46
MKS1-205ENST00000577315 SLC15A5A6NIM6 579 aa17.92■□□□□ 0.46
MKS1-205ENST00000577315 ERC2O15083 957 aa17.92■□□□□ 0.46
MKS1-205ENST00000577315 PRKAR2AP13861 404 aaKnown RBP17.92■□□□□ 0.46
MKS1-205ENST00000577315 AKR1B1P15121 316 aa17.92■□□□□ 0.46
MKS1-205ENST00000577315 SBK1Q52WX2 424 aa17.92■□□□□ 0.46
MKS1-205ENST00000577315 CTR9Q6PD62 1173 aa17.92■□□□□ 0.46
MKS1-205ENST00000577315 MB21D1Q8N884 522 aa17.92■□□□□ 0.46
MKS1-205ENST00000577315 APPBP2Q92624 585 aa17.92■□□□□ 0.46
MKS1-205ENST00000577315 STRBPQ96SI9 672 aaKnown RBP17.92■□□□□ 0.46
MKS1-205ENST00000577315 ZNF236Q9UL36 1845 aa17.91■□□□□ 0.46
MKS1-205ENST00000577315 GNAT2P19087 354 aa17.91■□□□□ 0.46
MKS1-205ENST00000577315 PTPREP23469 700 aa17.91■□□□□ 0.46
MKS1-205ENST00000577315 WDR78Q5VTH9 848 aa17.91■□□□□ 0.46
MKS1-205ENST00000577315 TANGO6Q9C0B7 1094 aa17.91■□□□□ 0.46
MKS1-205ENST00000577315 VCPKMTQ9H867 229 aa17.91■□□□□ 0.46
MKS1-205ENST00000577315 KANSL2Q9H9L4 492 aa17.91■□□□□ 0.46
MKS1-205ENST00000577315 BTBD7Q9P203 1132 aa17.91■□□□□ 0.46
MKS1-205ENST00000577315 GREB1LQ9C091 1923 aaPredicted RBP17.91■□□□□ 0.46
MKS1-205ENST00000577315 MYH4Q9Y623 1939 aa17.91■□□□□ 0.46
MKS1-205ENST00000577315 COL11A1P12107 1806 aaPredicted RBP17.91■□□□□ 0.46
MKS1-205ENST00000577315 FRMPD3Q5JV73 1810 aa17.91■□□□□ 0.46
MKS1-205ENST00000577315 WDR46O15213 610 aaKnown RBP17.9■□□□□ 0.46
MKS1-205ENST00000577315 RNF113AO15541 343 aaKnown RBP17.9■□□□□ 0.46
MKS1-205ENST00000577315 STRNO43815 780 aa17.9■□□□□ 0.46
MKS1-205ENST00000577315 EVI5O60447 810 aa17.9■□□□□ 0.46
MKS1-205ENST00000577315 TRIM32Q13049 653 aa17.9■□□□□ 0.46
MKS1-205ENST00000577315 SHCBP1Q8NEM2 672 aa17.9■□□□□ 0.46
MKS1-205ENST00000577315 PAWRQ96IZ0 340 aaKnown RBP17.9■□□□□ 0.46
MKS1-205ENST00000577315 ZBTB47Q9UFB7 747 aaPredicted RBP17.9■□□□□ 0.46
MKS1-205ENST00000577315 OGDHLQ9ULD0 1010 aa17.9■□□□□ 0.46
MKS1-205ENST00000577315 COLQQ9Y215 455 aaPredicted RBP17.9■□□□□ 0.46
MKS1-205ENST00000577315 CYP2D7A0A087X1C5 515 aa17.89■□□□□ 0.45
MKS1-205ENST00000577315 CHGBP05060 677 aa17.89■□□□□ 0.45
MKS1-205ENST00000577315 HOXC6P09630 235 aa17.89■□□□□ 0.45
MKS1-205ENST00000577315 DSG3P32926 999 aa17.89■□□□□ 0.45
MKS1-205ENST00000577315 RRP1P56182 461 aaKnown RBP17.89■□□□□ 0.45
MKS1-205ENST00000577315 CACNB2Q08289 660 aaPredicted RBP17.89■□□□□ 0.45
MKS1-205ENST00000577315 GRB14Q14449 540 aa17.89■□□□□ 0.45
MKS1-205ENST00000577315 MFSD14CQ5VZR4 134 aa17.89■□□□□ 0.45
MKS1-205ENST00000577315 NBPF3Q9H094 633 aa17.89■□□□□ 0.45
MKS1-205ENST00000577315 ZNF287Q9HBT7 754 aa17.89■□□□□ 0.45
MKS1-205ENST00000577315 GOPCQ9HD26 462 aa17.89■□□□□ 0.45
MKS1-205ENST00000577315 PCDHB15Q9Y5E8 787 aa17.89■□□□□ 0.45
MKS1-205ENST00000577315 TRIOBPQ9H2D6 2365 aa17.88■□□□□ 0.45
MKS1-205ENST00000577315 GSG1L2A8MUP6 293 aa17.88■□□□□ 0.45
MKS1-205ENST00000577315 FLOT1O75955 427 aa17.88■□□□□ 0.45
MKS1-205ENST00000577315 SIAH1Q8IUQ4 282 aa17.88■□□□□ 0.45
MKS1-205ENST00000577315 OSBP2Q969R2 916 aa17.88■□□□□ 0.45
MKS1-205ENST00000577315 SPATC1LQ9H0A9 340 aa17.88■□□□□ 0.45
MKS1-205ENST00000577315 GPAA1O43292 621 aa17.87■□□□□ 0.45
MKS1-205ENST00000577315 EEF2P13639 858 aaKnown RBP17.87■□□□□ 0.45
MKS1-205ENST00000577315 ATP2B2Q01814 1243 aa17.87■□□□□ 0.45
MKS1-205ENST00000577315 CCL14Q16627 93 aa17.87■□□□□ 0.45
MKS1-205ENST00000577315 MOV10L1Q9BXT6 1211 aaKnown RBP17.87■□□□□ 0.45
MKS1-205ENST00000577315 MROH8Q9H579 483 aa17.87■□□□□ 0.45
MKS1-205ENST00000577315 C11orf49Q9H6J7 331 aa17.87■□□□□ 0.45
MKS1-205ENST00000577315 MKNK2Q9HBH9 465 aa17.87■□□□□ 0.45
MKS1-205ENST00000577315 SLC5A4Q9NY91 659 aa17.87■□□□□ 0.45
MKS1-205ENST00000577315 ROBO3Q96MS0 1386 aa17.87■□□□□ 0.45
MKS1-205ENST00000577315 MSCO60682 206 aa17.86■□□□□ 0.45
MKS1-205ENST00000577315 TDO2P48775 406 aa17.86■□□□□ 0.45
MKS1-205ENST00000577315 KIAA1755Q5JYT7 1200 aa17.86■□□□□ 0.45
MKS1-205ENST00000577315 TSHZ3Q63HK5 1081 aa17.86■□□□□ 0.45
MKS1-205ENST00000577315 CHRDL2Q6WN34 429 aa17.86■□□□□ 0.45
MKS1-205ENST00000577315 NACAP1Q9BZK3 213 aa17.86■□□□□ 0.45
MKS1-205ENST00000577315 PLXNA1Q9UIW2 1896 aa17.86■□□□□ 0.45
MKS1-205ENST00000577315 MINDY4BA8MYZ0 360 aa17.85■□□□□ 0.45
MKS1-205ENST00000577315 PATL2C9JE40 543 aaKnown RBP17.85■□□□□ 0.45
MKS1-205ENST00000577315 SMIM22K7EJ46 135 aa17.85■□□□□ 0.45
MKS1-205ENST00000577315 SLC25A27O95847 323 aa17.85■□□□□ 0.45
MKS1-205ENST00000577315 DPP9Q86TI2 863 aa17.85■□□□□ 0.45
MKS1-205ENST00000577315 CLEC10AQ8IUN9 316 aa17.85■□□□□ 0.45
MKS1-205ENST00000577315 ABRAQ8N0Z2 381 aa17.85■□□□□ 0.45
MKS1-205ENST00000577315 SPICE1Q8N0Z3 855 aa17.85■□□□□ 0.45
MKS1-205ENST00000577315 PI4K2BQ8TCG2 481 aa17.85■□□□□ 0.45
MKS1-205ENST00000577315 DIS3LQ8TF46 1054 aaKnown RBP17.85■□□□□ 0.45
MKS1-205ENST00000577315 APPP05067 770 aa17.84■□□□□ 0.45
MKS1-205ENST00000577315 ERCC3P19447 782 aa17.84■□□□□ 0.45
MKS1-205ENST00000577315 MX1P20591 662 aa17.84■□□□□ 0.45
MKS1-205ENST00000577315 RASA1P20936 1047 aa17.84■□□□□ 0.45
MKS1-205ENST00000577315 FXR1P51114 621 aaKnown RBP eCLIP17.84■□□□□ 0.45
MKS1-205ENST00000577315 AAMPQ13685 434 aa17.84■□□□□ 0.45
MKS1-205ENST00000577315 PLS1Q14651 629 aa17.84■□□□□ 0.45
MKS1-205ENST00000577315 ZNF444Q8N0Y2 327 aaPredicted RBP17.84■□□□□ 0.45
MKS1-205ENST00000577315 ATG4CQ96DT6 458 aa17.84■□□□□ 0.45
MKS1-205ENST00000577315 FSD1Q9BTV5 496 aa17.84■□□□□ 0.45
MKS1-205ENST00000577315 NYAP2Q9P242 653 aa17.84■□□□□ 0.45
MKS1-205ENST00000577315 ADAMTS5Q9UNA0 930 aa17.84■□□□□ 0.45
MKS1-205ENST00000577315 SLC3A2P08195 630 aaKnown RBP17.83■□□□□ 0.44
MKS1-205ENST00000577315 ADORA2AP29274 412 aa17.83■□□□□ 0.44
MKS1-205ENST00000577315 CCND3P30281 292 aaPredicted RBP17.83■□□□□ 0.44
MKS1-205ENST00000577315 COPB2P35606 906 aa17.83■□□□□ 0.44
MKS1-205ENST00000577315 MNX1P50219 401 aaPredicted RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms