RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 SMAD3P84022 425 aaKnown RBP12.35□□□□□ -0.43
NPLOC4-220ENST00000576940 EVX2Q03828 476 aa12.35□□□□□ -0.43
NPLOC4-220ENST00000576940 TLE2Q04725 743 aa12.35□□□□□ -0.43
NPLOC4-220ENST00000576940 COG2Q14746 738 aa12.35□□□□□ -0.43
NPLOC4-220ENST00000576940 SEPT2Q15019 361 aa12.35□□□□□ -0.43
NPLOC4-220ENST00000576940 SNX17Q15036 470 aa12.35□□□□□ -0.43
NPLOC4-220ENST00000576940 LRRC41Q15345 812 aa12.35□□□□□ -0.43
NPLOC4-220ENST00000576940 OLFML2BQ68BL8 750 aa12.35□□□□□ -0.43
NPLOC4-220ENST00000576940 TTC6Q86TZ1 520 aa12.35□□□□□ -0.43
NPLOC4-220ENST00000576940 MAGEB6Q8N7X4 407 aa12.35□□□□□ -0.43
NPLOC4-220ENST00000576940 CLUAP1Q96AJ1 413 aa12.35□□□□□ -0.43
NPLOC4-220ENST00000576940 ZNF512BQ96KM6 892 aaPredicted RBP12.35□□□□□ -0.43
NPLOC4-220ENST00000576940 ANTXR1Q9H6X2 564 aa12.35□□□□□ -0.43
NPLOC4-220ENST00000576940 HOXC10Q9NYD6 342 aa12.35□□□□□ -0.43
NPLOC4-220ENST00000576940 TLR7Q9NYK1 1049 aaKnown RBP12.35□□□□□ -0.43
NPLOC4-220ENST00000576940 FOCADQ5VW36 1801 aa12.34□□□□□ -0.43
NPLOC4-220ENST00000576940 SURF6O75683 361 aaKnown RBP12.34□□□□□ -0.43
NPLOC4-220ENST00000576940 BCAR3O75815 825 aa12.34□□□□□ -0.43
NPLOC4-220ENST00000576940 TRIM27P14373 513 aa12.34□□□□□ -0.43
NPLOC4-220ENST00000576940 OS9Q13438 667 aaPredicted RBP12.34□□□□□ -0.43
NPLOC4-220ENST00000576940 KIAA1755Q5JYT7 1200 aa12.34□□□□□ -0.43
NPLOC4-220ENST00000576940 SPATC1LQ9H0A9 340 aa12.34□□□□□ -0.43
NPLOC4-220ENST00000576940 EHD4Q9H223 541 aa12.34□□□□□ -0.43
NPLOC4-220ENST00000576940 DBNLQ9UJU6 430 aaKnown RBP12.34□□□□□ -0.43
NPLOC4-220ENST00000576940 MYH1P12882 1939 aa12.34□□□□□ -0.43
NPLOC4-220ENST00000576940 MPHOSPH10O00566 681 aaKnown RBP12.33□□□□□ -0.44
NPLOC4-220ENST00000576940 ATP8B2P98198 1209 aa12.33□□□□□ -0.44
NPLOC4-220ENST00000576940 POLA2Q14181 598 aa12.33□□□□□ -0.44
NPLOC4-220ENST00000576940 PLS1Q14651 629 aa12.33□□□□□ -0.44
NPLOC4-220ENST00000576940 GRIN2CQ14957 1233 aa12.33□□□□□ -0.44
NPLOC4-220ENST00000576940 FAM47AQ5JRC9 791 aa12.33□□□□□ -0.44
NPLOC4-220ENST00000576940 NCAPG2Q86XI2 1143 aa12.33□□□□□ -0.44
NPLOC4-220ENST00000576940 FRAT1Q92837 279 aaPredicted RBP12.33□□□□□ -0.44
NPLOC4-220ENST00000576940 EAF2Q96CJ1 260 aaPredicted RBP12.33□□□□□ -0.44
NPLOC4-220ENST00000576940 TACC3Q9Y6A5 838 aa12.33□□□□□ -0.44
NPLOC4-220ENST00000576940 SMCHD1A6NHR9 2005 aa12.32□□□□□ -0.44
NPLOC4-220ENST00000576940 IGSF3O75054 1194 aa12.32□□□□□ -0.44
NPLOC4-220ENST00000576940 POLR3DP05423 398 aaPredicted RBP12.32□□□□□ -0.44
NPLOC4-220ENST00000576940 DSG3P32926 999 aa12.32□□□□□ -0.44
NPLOC4-220ENST00000576940 C1orf53Q5VUE5 145 aa12.32□□□□□ -0.44
NPLOC4-220ENST00000576940 USP38Q8NB14 1042 aa12.32□□□□□ -0.44
NPLOC4-220ENST00000576940 SHCBP1Q8NEM2 672 aa12.32□□□□□ -0.44
NPLOC4-220ENST00000576940 SSH3Q8TE77 659 aa12.32□□□□□ -0.44
NPLOC4-220ENST00000576940 SYMPKQ92797 1274 aaKnown RBP12.32□□□□□ -0.44
NPLOC4-220ENST00000576940 MAML3Q96JK9 1138 aa12.32□□□□□ -0.44
NPLOC4-220ENST00000576940 RNPC3Q96LT9 517 aaKnown RBP12.32□□□□□ -0.44
NPLOC4-220ENST00000576940 TANGO6Q9C0B7 1094 aa12.32□□□□□ -0.44
NPLOC4-220ENST00000576940 C1orf115Q9H7X2 142 aa12.32□□□□□ -0.44
NPLOC4-220ENST00000576940 IPO8O15397 1037 aaKnown RBP12.31□□□□□ -0.44
NPLOC4-220ENST00000576940 PGK1P00558 417 aa12.31□□□□□ -0.44
NPLOC4-220ENST00000576940 CLTBP09497 229 aa12.31□□□□□ -0.44
NPLOC4-220ENST00000576940 GABPAQ06546 454 aa12.31□□□□□ -0.44
NPLOC4-220ENST00000576940 SAMD1Q6SPF0 538 aaPredicted RBP12.31□□□□□ -0.44
NPLOC4-220ENST00000576940 SIAH1Q8IUQ4 282 aa12.31□□□□□ -0.44
NPLOC4-220ENST00000576940 RIOK1Q9BRS2 568 aaKnown RBP12.31□□□□□ -0.44
NPLOC4-220ENST00000576940 SLC5A4Q9NY91 659 aa12.31□□□□□ -0.44
NPLOC4-220ENST00000576940 PHF24Q9UPV7 400 aa12.31□□□□□ -0.44
NPLOC4-220ENST00000576940 TTC28Q96AY4 2481 aa12.3□□□□□ -0.44
NPLOC4-220ENST00000576940 PQBP1O60828 265 aaKnown RBP12.3□□□□□ -0.44
NPLOC4-220ENST00000576940 PGK2P07205 417 aa12.3□□□□□ -0.44
NPLOC4-220ENST00000576940 RAG1P15918 1043 aa12.3□□□□□ -0.44
NPLOC4-220ENST00000576940 TAL1P17542 331 aaPredicted RBP12.3□□□□□ -0.44
NPLOC4-220ENST00000576940 MAP3K12Q12852 859 aa12.3□□□□□ -0.44
NPLOC4-220ENST00000576940 SPICE1Q8N0Z3 855 aa12.3□□□□□ -0.44
NPLOC4-220ENST00000576940 TMEM57Q8N5G2 664 aa12.3□□□□□ -0.44
NPLOC4-220ENST00000576940 ATG4CQ96DT6 458 aa12.3□□□□□ -0.44
NPLOC4-220ENST00000576940 MROH8Q9H579 483 aa12.3□□□□□ -0.44
NPLOC4-220ENST00000576940 XPNPEP3Q9NQH7 507 aa12.3□□□□□ -0.44
NPLOC4-220ENST00000576940 TMEM39AQ9NV64 488 aa12.3□□□□□ -0.44
NPLOC4-220ENST00000576940 MCM9Q9NXL9 1143 aa12.3□□□□□ -0.44
NPLOC4-220ENST00000576940 RAPGEFL1Q9UHV5 662 aa12.3□□□□□ -0.44
NPLOC4-220ENST00000576940 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.29□□□□□ -0.44
NPLOC4-220ENST00000576940 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.29□□□□□ -0.44
NPLOC4-220ENST00000576940 KIAA0355O15063 1070 aa12.29□□□□□ -0.44
NPLOC4-220ENST00000576940 FLOT1O75955 427 aa12.29□□□□□ -0.44
NPLOC4-220ENST00000576940 CYP2D6P10635 497 aa12.29□□□□□ -0.44
NPLOC4-220ENST00000576940 RARBP10826 455 aa12.29□□□□□ -0.44
NPLOC4-220ENST00000576940 FCER1AP12319 257 aa12.29□□□□□ -0.44
NPLOC4-220ENST00000576940 COL9A1P20849 921 aa12.29□□□□□ -0.44
NPLOC4-220ENST00000576940 TMEM132BQ14DG7 1078 aa12.29□□□□□ -0.44
NPLOC4-220ENST00000576940 TJAP1Q5JTD0 557 aa12.29□□□□□ -0.44
NPLOC4-220ENST00000576940 CERS3Q8IU89 383 aa12.29□□□□□ -0.44
NPLOC4-220ENST00000576940 CLEC10AQ8IUN9 316 aa12.29□□□□□ -0.44
NPLOC4-220ENST00000576940 SLC44A5Q8NCS7 719 aa12.29□□□□□ -0.44
NPLOC4-220ENST00000576940 PPM1EQ8WY54 764 aa12.29□□□□□ -0.44
NPLOC4-220ENST00000576940 NOP58Q9Y2X3 529 aaKnown RBP12.29□□□□□ -0.44
NPLOC4-220ENST00000576940 MAGEB6P1A0A0J9YX57 407 aa12.28□□□□□ -0.44
NPLOC4-220ENST00000576940 A0A1W2PQ45 241 aaPredicted RBP12.28□□□□□ -0.44
NPLOC4-220ENST00000576940 A0A1W2PQY0 241 aa12.28□□□□□ -0.44
NPLOC4-220ENST00000576940 TNFRSF10AO00220 468 aa12.28□□□□□ -0.44
NPLOC4-220ENST00000576940 DNAJB2P25686 324 aa12.28□□□□□ -0.44
NPLOC4-220ENST00000576940 FPGSQ05932 587 aa12.28□□□□□ -0.44
NPLOC4-220ENST00000576940 FAAP100Q0VG06 881 aa12.28□□□□□ -0.44
NPLOC4-220ENST00000576940 RNF180Q86T96 592 aa12.28□□□□□ -0.44
NPLOC4-220ENST00000576940 ABRAQ8N0Z2 381 aa12.28□□□□□ -0.44
NPLOC4-220ENST00000576940 MB21D1Q8N884 522 aa12.28□□□□□ -0.44
NPLOC4-220ENST00000576940 SDR42E1Q8WUS8 393 aa12.28□□□□□ -0.44
NPLOC4-220ENST00000576940 LENG1Q96BZ8 264 aaPredicted RBP12.28□□□□□ -0.44
NPLOC4-220ENST00000576940 DYNLL2Q96FJ2 89 aa12.28□□□□□ -0.44
NPLOC4-220ENST00000576940 TINF2Q9BSI4 451 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms