RNA–Protein interactions for RNA: ENST00000575709.5

USP6-206, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 8,185 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-206ENST00000575709 RAB3GAP1Q15042 981 aa11.57□□□□□ -0.56
USP6-206ENST00000575709 SPDYE2Q495Y8 402 aa11.57□□□□□ -0.56
USP6-206ENST00000575709 RAPH1Q70E73 1250 aa11.57□□□□□ -0.56
USP6-206ENST00000575709 SKA2Q8WVK7 121 aaPredicted RBP11.57□□□□□ -0.56
USP6-206ENST00000575709 DTNBP1Q96EV8 351 aa11.57□□□□□ -0.56
USP6-206ENST00000575709 TMEM191CA6NGB0 347 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 SPAG7O75391 227 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 FMNL1O95466 1100 aaPredicted RBP11.56□□□□□ -0.56
USP6-206ENST00000575709 TMEM191BP0C7N4 346 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 MAGEA9P43362 315 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 FANCCQ00597 558 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 HIPK4Q8NE63 616 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 COG4Q9H9E3 785 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 ORC4O43929 436 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 RPL13P26373 211 aaKnown RBP11.56□□□□□ -0.56
USP6-206ENST00000575709 NAPAP54920 295 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 CC2D2BQ6DHV5 1058 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 HIBCHQ6NVY1 386 aaPredicted RBP11.56□□□□□ -0.56
USP6-206ENST00000575709 PHKBQ93100 1093 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 RRP36Q96EU6 259 aaKnown RBP11.56□□□□□ -0.56
USP6-206ENST00000575709 FIS1Q9Y3D6 152 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.56□□□□□ -0.56
USP6-206ENST00000575709 OMA1Q96E52 524 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 FNBP1Q96RU3 617 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 MIS18AQ9NYP9 233 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 STX8Q9UNK0 236 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 ENO4A6NNW6 628 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 POC1B-GALNT4F8VUJ3 575 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 CFLARO15519 480 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 CHGBP05060 677 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 DTHD1Q6ZMT9 781 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 RNPEPQ9H4A4 650 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 H0Y3Z8 333 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 EFCAB2Q5VUJ9 269 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 BRF1Q92994 677 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 ACTR5Q9H9F9 607 aaPredicted RBP11.56□□□□□ -0.56
USP6-206ENST00000575709 STX18Q9P2W9 335 aaKnown RBP11.56□□□□□ -0.56
USP6-206ENST00000575709 TRIM75PA6NK02 468 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 KCNK3O14649 394 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 ARHGAP6O43182 974 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 SLFN14P0C7P3 912 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 NCF2P19878 526 aaPredicted RBP11.56□□□□□ -0.56
USP6-206ENST00000575709 ADCY1Q08828 1119 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 NFE2L2Q16236 605 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 ATG16L1Q676U5 607 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 ADAT2Q7Z6V5 191 aaKnown RBP11.56□□□□□ -0.56
USP6-206ENST00000575709 GDAP1Q8TB36 358 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 DPH5Q9H2P9 285 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 C6orf50Q9HD87 102 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 HAUS2Q9NVX0 235 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 RAD50Q92878 1312 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 GPC4O75487 556 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 RNASELQ05823 741 aaKnown RBP11.56□□□□□ -0.56
USP6-206ENST00000575709 TBC1D10BQ4KMP7 808 aaPredicted RBP11.56□□□□□ -0.56
USP6-206ENST00000575709 TEX2Q8IWB9 1127 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 ZNF513Q8N8E2 541 aaPredicted RBP11.56□□□□□ -0.56
USP6-206ENST00000575709 TCEANC2Q96MN5 208 aa11.56□□□□□ -0.56
USP6-206ENST00000575709 IFIH1Q9BYX4 1025 aaKnown RBP11.56□□□□□ -0.56
USP6-206ENST00000575709 ST13P50502 369 aaKnown RBP11.55□□□□□ -0.56
USP6-206ENST00000575709 PTPROQ16827 1216 aa11.55□□□□□ -0.56
USP6-206ENST00000575709 NUP58Q9BVL2 599 aa11.55□□□□□ -0.56
USP6-206ENST00000575709 NKTRP30414 1462 aaKnown RBP11.55□□□□□ -0.56
USP6-206ENST00000575709 APLFQ8IW19 511 aaPredicted RBP11.55□□□□□ -0.56
USP6-206ENST00000575709 VTI1AQ96AJ9 217 aa11.55□□□□□ -0.56
USP6-206ENST00000575709 OSBPL1AQ9BXW6 950 aa11.55□□□□□ -0.56
USP6-206ENST00000575709 NDEL1Q9GZM8 345 aa11.55□□□□□ -0.56
USP6-206ENST00000575709 RIC8AQ9NPQ8 531 aa11.55□□□□□ -0.56
USP6-206ENST00000575709 RASSF10A6NK89 507 aa11.55□□□□□ -0.56
USP6-206ENST00000575709 EFCAB8A8MWE9 144 aa11.55□□□□□ -0.56
USP6-206ENST00000575709 SEC31AO94979 1220 aaKnown RBP11.55□□□□□ -0.56
USP6-206ENST00000575709 KRT17Q04695 432 aa11.55□□□□□ -0.56
USP6-206ENST00000575709 WASHC5Q12768 1159 aa11.55□□□□□ -0.56
USP6-206ENST00000575709 TYW1BQ6NUM6 668 aa11.55□□□□□ -0.56
USP6-206ENST00000575709 GFM2Q969S9 779 aaKnown RBP11.55□□□□□ -0.56
USP6-206ENST00000575709 ZFYVE19Q96K21 471 aa11.55□□□□□ -0.56
USP6-206ENST00000575709 SNX5Q9Y5X3 404 aa11.55□□□□□ -0.56
USP6-206ENST00000575709 WDR47O94967 919 aa11.55□□□□□ -0.56
USP6-206ENST00000575709 HARSP12081 509 aaKnown RBP11.55□□□□□ -0.56
USP6-206ENST00000575709 TATP17735 454 aaPredicted RBP11.55□□□□□ -0.56
USP6-206ENST00000575709 SERPINI1Q99574 410 aa11.55□□□□□ -0.56
USP6-206ENST00000575709 IFNB1P01574 187 aa11.55□□□□□ -0.56
USP6-206ENST00000575709 TRPV6Q9H1D0 765 aa11.55□□□□□ -0.56
USP6-206ENST00000575709 PTPN22Q9Y2R2 807 aa11.55□□□□□ -0.56
USP6-206ENST00000575709 EXOC5O00471 708 aa11.55□□□□□ -0.56
USP6-206ENST00000575709 KRT79Q5XKE5 535 aa11.55□□□□□ -0.56
USP6-206ENST00000575709 CATSPER3Q86XQ3 398 aa11.55□□□□□ -0.56
USP6-206ENST00000575709 MRPS26Q9BYN8 205 aaKnown RBP11.55□□□□□ -0.56
USP6-206ENST00000575709 TRIM15Q9C019 465 aa11.55□□□□□ -0.56
USP6-206ENST00000575709 TSTA3Q13630 321 aaPredicted RBP11.54□□□□□ -0.56
USP6-206ENST00000575709 TMTC1Q8IUR5 882 aa11.54□□□□□ -0.56
USP6-206ENST00000575709 TYW1Q9NV66 732 aaKnown RBP11.54□□□□□ -0.56
USP6-206ENST00000575709 CD2APQ9Y5K6 639 aa11.54□□□□□ -0.56
USP6-206ENST00000575709 OGFOD1Q8N543 542 aa11.54□□□□□ -0.56
USP6-206ENST00000575709 PHACTR3Q96KR7 559 aa11.54□□□□□ -0.56
USP6-206ENST00000575709 AMFRQ9UKV5 643 aa11.54□□□□□ -0.56
USP6-206ENST00000575709 C4orf50Q6ZRC1 276 aa11.54□□□□□ -0.56
USP6-206ENST00000575709 CAB39Q9Y376 341 aaPredicted RBP11.54□□□□□ -0.56
USP6-206ENST00000575709 ARHGAP10A1A4S6 786 aa11.54□□□□□ -0.56
USP6-206ENST00000575709 EIF3CLB5ME19 914 aaKnown RBP11.54□□□□□ -0.56
USP6-206ENST00000575709 TJAP1Q5JTD0 557 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms