RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 HSPD1P10809 573 aaKnown RBP15.76■□□□□ 0.11
RPAIN-216ENST00000575599 EEF2P13639 858 aaKnown RBP15.76■□□□□ 0.11
RPAIN-216ENST00000575599 GCLCP48506 637 aaPredicted RBP15.76■□□□□ 0.11
RPAIN-216ENST00000575599 MFAP1P55081 439 aaKnown RBP15.76■□□□□ 0.11
RPAIN-216ENST00000575599 CTDSPL2Q05D32 466 aa15.76■□□□□ 0.11
RPAIN-216ENST00000575599 ZNF444Q8N0Y2 327 aaPredicted RBP15.76■□□□□ 0.11
RPAIN-216ENST00000575599 TRIM47Q96LD4 638 aa15.76■□□□□ 0.11
RPAIN-216ENST00000575599 SH2D4AQ9H788 454 aa15.76■□□□□ 0.11
RPAIN-216ENST00000575599 KANSL2Q9H9L4 492 aa15.76■□□□□ 0.11
RPAIN-216ENST00000575599 USP17L15C9J2P7 530 aa15.75■□□□□ 0.11
RPAIN-216ENST00000575599 USP17L13C9JLJ4 530 aa15.75■□□□□ 0.11
RPAIN-216ENST00000575599 USP17L11C9JVI0 530 aa15.75■□□□□ 0.11
RPAIN-216ENST00000575599 USP17L18D6R9N7 530 aa15.75■□□□□ 0.11
RPAIN-216ENST00000575599 USP17L22D6RA61 530 aa15.75■□□□□ 0.11
RPAIN-216ENST00000575599 USP17L17D6RBQ6 530 aa15.75■□□□□ 0.11
RPAIN-216ENST00000575599 USP17L19D6RCP7 530 aa15.75■□□□□ 0.11
RPAIN-216ENST00000575599 USP17L20D6RJB6 530 aa15.75■□□□□ 0.11
RPAIN-216ENST00000575599 RAD21O60216 631 aa15.75■□□□□ 0.11
RPAIN-216ENST00000575599 FCGRTP55899 365 aa15.75■□□□□ 0.11
RPAIN-216ENST00000575599 HERVK_113P62684 666 aa15.75■□□□□ 0.11
RPAIN-216ENST00000575599 USP17L24Q0WX57 530 aa15.75■□□□□ 0.11
RPAIN-216ENST00000575599 FAM110CQ1W6H9 321 aa15.75■□□□□ 0.11
RPAIN-216ENST00000575599 SKAP1Q86WV1 359 aa15.75■□□□□ 0.11
RPAIN-216ENST00000575599 SIAH1Q8IUQ4 282 aa15.75■□□□□ 0.11
RPAIN-216ENST00000575599 SPICE1Q8N0Z3 855 aa15.75■□□□□ 0.11
RPAIN-216ENST00000575599 P2RX7Q99572 595 aaKnown RBP15.75■□□□□ 0.11
RPAIN-216ENST00000575599 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.75■□□□□ 0.11
RPAIN-216ENST00000575599 RPAP3Q9H6T3 665 aaPredicted RBP15.75■□□□□ 0.11
RPAIN-216ENST00000575599 MGAMO43451 1857 aa15.75■□□□□ 0.11
RPAIN-216ENST00000575599 PEX10O60683 326 aa15.75■□□□□ 0.11
RPAIN-216ENST00000575599 FGAP02671 866 aa15.75■□□□□ 0.11
RPAIN-216ENST00000575599 TSPY3P0CV98 308 aa15.75■□□□□ 0.11
RPAIN-216ENST00000575599 TSPY8P0CW00 308 aa15.75■□□□□ 0.11
RPAIN-216ENST00000575599 ALX1Q15699 326 aa15.75■□□□□ 0.11
RPAIN-216ENST00000575599 FAM47AQ5JRC9 791 aa15.75■□□□□ 0.11
RPAIN-216ENST00000575599 PAGR1Q9BTK6 254 aa15.75■□□□□ 0.11
RPAIN-216ENST00000575599 TANGO6Q9C0B7 1094 aa15.75■□□□□ 0.11
RPAIN-216ENST00000575599 TMX2Q9Y320 296 aa15.75■□□□□ 0.11
RPAIN-216ENST00000575599 PTCH2Q9Y6C5 1203 aa15.75■□□□□ 0.11
RPAIN-216ENST00000575599 GNRH1P01148 92 aa15.74■□□□□ 0.11
RPAIN-216ENST00000575599 HAND2P61296 217 aa15.74■□□□□ 0.11
RPAIN-216ENST00000575599 KIAA1755Q5JYT7 1200 aa15.74■□□□□ 0.11
RPAIN-216ENST00000575599 CATSPERGQ6ZRH7 1159 aa15.74■□□□□ 0.11
RPAIN-216ENST00000575599 VCPKMTQ9H867 229 aa15.74■□□□□ 0.11
RPAIN-216ENST00000575599 INCENPQ9NQS7 918 aa15.74■□□□□ 0.11
RPAIN-216ENST00000575599 TOMM22Q9NS69 142 aa15.74■□□□□ 0.11
RPAIN-216ENST00000575599 ZMYM6O95789 1325 aa15.73■□□□□ 0.11
RPAIN-216ENST00000575599 MYPNQ86TC9 1320 aa15.73■□□□□ 0.11
RPAIN-216ENST00000575599 TNPO2O14787 897 aaKnown RBP15.73■□□□□ 0.11
RPAIN-216ENST00000575599 HOXD10P28358 340 aa15.73■□□□□ 0.11
RPAIN-216ENST00000575599 TFAP4Q01664 338 aa15.73■□□□□ 0.11
RPAIN-216ENST00000575599 ZNF579Q8NAF0 562 aaKnown RBP15.73■□□□□ 0.11
RPAIN-216ENST00000575599 LPAR1Q92633 364 aa15.73■□□□□ 0.11
RPAIN-216ENST00000575599 CEP95Q96GE4 821 aa15.73■□□□□ 0.11
RPAIN-216ENST00000575599 GOPCQ9HD26 462 aa15.73■□□□□ 0.11
RPAIN-216ENST00000575599 TXNRD2Q9NNW7 524 aa15.73■□□□□ 0.11
RPAIN-216ENST00000575599 SRRDQ9UH36 339 aa15.73■□□□□ 0.11
RPAIN-216ENST00000575599 ANAPC4Q9UJX5 808 aa15.73■□□□□ 0.11
RPAIN-216ENST00000575599 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.73■□□□□ 0.11
RPAIN-216ENST00000575599 PLIN4Q96Q06 1357 aa15.72■□□□□ 0.11
RPAIN-216ENST00000575599 TSPY2A6NKD2 308 aa15.72■□□□□ 0.11
RPAIN-216ENST00000575599 PRKCZQ05513 592 aa15.72■□□□□ 0.11
RPAIN-216ENST00000575599 RRP12Q5JTH9 1297 aaKnown RBP15.72■□□□□ 0.11
RPAIN-216ENST00000575599 GTF3C2Q8WUA4 911 aaPredicted RBP15.72■□□□□ 0.11
RPAIN-216ENST00000575599 IL25Q9H293 177 aa15.72■□□□□ 0.11
RPAIN-216ENST00000575599 MORF4L1Q9UBU8 362 aa15.72■□□□□ 0.11
RPAIN-216ENST00000575599 CLIP2Q9UDT6 1046 aa15.72■□□□□ 0.11
RPAIN-216ENST00000575599 TACC3Q9Y6A5 838 aa15.72■□□□□ 0.11
RPAIN-216ENST00000575599 HTTP42858 3142 aa15.71■□□□□ 0.11
RPAIN-216ENST00000575599 MYH4Q9Y623 1939 aa15.71■□□□□ 0.11
RPAIN-216ENST00000575599 IGKV6D-41A0A0C4DH26 115 aa15.71■□□□□ 0.11
RPAIN-216ENST00000575599 SPDYE16A6NNV3 312 aaPredicted RBP15.71■□□□□ 0.11
RPAIN-216ENST00000575599 WDR46O15213 610 aaKnown RBP15.71■□□□□ 0.11
RPAIN-216ENST00000575599 RANBP6O60518 1105 aaKnown RBP15.71■□□□□ 0.11
RPAIN-216ENST00000575599 PRMT2P55345 433 aa15.71■□□□□ 0.11
RPAIN-216ENST00000575599 ERVK-9P63128 1117 aa15.71■□□□□ 0.11
RPAIN-216ENST00000575599 ERVK-24P63145 666 aa15.71■□□□□ 0.11
RPAIN-216ENST00000575599 SLC9C1Q4G0N8 1177 aa15.71■□□□□ 0.11
RPAIN-216ENST00000575599 LRRC47Q8N1G4 583 aaKnown RBP15.71■□□□□ 0.11
RPAIN-216ENST00000575599 GPRC5AQ8NFJ5 357 aa15.71■□□□□ 0.11
RPAIN-216ENST00000575599 NEDD1Q8NHV4 660 aa15.71■□□□□ 0.11
RPAIN-216ENST00000575599 RAET1EQ8TD07 263 aa15.71■□□□□ 0.11
RPAIN-216ENST00000575599 NYAP2Q9P242 653 aa15.71■□□□□ 0.11
RPAIN-216ENST00000575599 RBPJLQ9UBG7 517 aa15.71■□□□□ 0.11
RPAIN-216ENST00000575599 RAD50Q92878 1312 aa15.7■□□□□ 0.1
RPAIN-216ENST00000575599 LAMA4Q16363 1823 aa15.7■□□□□ 0.1
RPAIN-216ENST00000575599 FLOT1O75955 427 aa15.7■□□□□ 0.1
RPAIN-216ENST00000575599 TTLL1O95922 423 aa15.7■□□□□ 0.1
RPAIN-216ENST00000575599 CHMLP26374 656 aa15.7■□□□□ 0.1
RPAIN-216ENST00000575599 SOX10P56693 466 aa15.7■□□□□ 0.1
RPAIN-216ENST00000575599 POTEEQ6S8J3 1075 aa15.7■□□□□ 0.1
RPAIN-216ENST00000575599 TBC1D10CQ8IV04 446 aa15.7■□□□□ 0.1
RPAIN-216ENST00000575599 RUFY2Q8WXA3 655 aa15.7■□□□□ 0.1
RPAIN-216ENST00000575599 COA7Q96BR5 231 aa15.7■□□□□ 0.1
RPAIN-216ENST00000575599 MTMR4Q9NYA4 1195 aa15.7■□□□□ 0.1
RPAIN-216ENST00000575599 GABRQQ9UN88 632 aa15.7■□□□□ 0.1
RPAIN-216ENST00000575599 ZNF213O14771 459 aa15.69■□□□□ 0.1
RPAIN-216ENST00000575599 ORC4O43929 436 aa15.69■□□□□ 0.1
RPAIN-216ENST00000575599 COG2Q14746 738 aa15.69■□□□□ 0.1
RPAIN-216ENST00000575599 FAM83BQ5T0W9 1011 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms