RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 RARBP10826 455 aa10.94□□□□□ -0.66
SMG6-218ENST00000575454 FCER1AP12319 257 aa10.94□□□□□ -0.66
SMG6-218ENST00000575454 SHMT1P34896 483 aa10.94□□□□□ -0.66
SMG6-218ENST00000575454 TLE2Q04725 743 aa10.94□□□□□ -0.66
SMG6-218ENST00000575454 POLA2Q14181 598 aa10.94□□□□□ -0.66
SMG6-218ENST00000575454 LRRC41Q15345 812 aa10.94□□□□□ -0.66
SMG6-218ENST00000575454 TJAP1Q5JTD0 557 aa10.94□□□□□ -0.66
SMG6-218ENST00000575454 MAGEB6Q8N7X4 407 aa10.94□□□□□ -0.66
SMG6-218ENST00000575454 MIGA1Q8NAN2 632 aa10.94□□□□□ -0.66
SMG6-218ENST00000575454 TRIM43Q96BQ3 446 aaPredicted RBP10.94□□□□□ -0.66
SMG6-218ENST00000575454 SH2D4AQ9H788 454 aa10.94□□□□□ -0.66
SMG6-218ENST00000575454 PHF24Q9UPV7 400 aa10.94□□□□□ -0.66
SMG6-218ENST00000575454 LOC285556D6RIA3 1793 aa10.93□□□□□ -0.66
SMG6-218ENST00000575454 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.93□□□□□ -0.66
SMG6-218ENST00000575454 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.93□□□□□ -0.66
SMG6-218ENST00000575454 MPHOSPH10O00566 681 aaKnown RBP10.93□□□□□ -0.66
SMG6-218ENST00000575454 COBLO75128 1261 aa10.93□□□□□ -0.66
SMG6-218ENST00000575454 SLC25A27O95847 323 aa10.93□□□□□ -0.66
SMG6-218ENST00000575454 RAG1P15918 1043 aa10.93□□□□□ -0.66
SMG6-218ENST00000575454 ATP8B2P98198 1209 aa10.93□□□□□ -0.66
SMG6-218ENST00000575454 PLS1Q14651 629 aa10.93□□□□□ -0.66
SMG6-218ENST00000575454 SEPT2Q15019 361 aa10.93□□□□□ -0.66
SMG6-218ENST00000575454 CCDC174Q6PII3 467 aa10.93□□□□□ -0.66
SMG6-218ENST00000575454 NCAPG2Q86XI2 1143 aa10.93□□□□□ -0.66
SMG6-218ENST00000575454 SSH3Q8TE77 659 aa10.93□□□□□ -0.66
SMG6-218ENST00000575454 FERMT2Q96AC1 680 aa10.93□□□□□ -0.66
SMG6-218ENST00000575454 MAML3Q96JK9 1138 aa10.93□□□□□ -0.66
SMG6-218ENST00000575454 TOX2Q96NM4 488 aa10.93□□□□□ -0.66
SMG6-218ENST00000575454 XPNPEP3Q9NQH7 507 aa10.93□□□□□ -0.66
SMG6-218ENST00000575454 AK9Q5TCS8 1911 aa10.93□□□□□ -0.66
SMG6-218ENST00000575454 MGAMO43451 1857 aa10.93□□□□□ -0.66
SMG6-218ENST00000575454 DDX60LQ5H9U9 1706 aaKnown RBP10.92□□□□□ -0.66
SMG6-218ENST00000575454 KIAA0355O15063 1070 aa10.92□□□□□ -0.66
SMG6-218ENST00000575454 TRIM27P14373 513 aa10.92□□□□□ -0.66
SMG6-218ENST00000575454 DSG3P32926 999 aa10.92□□□□□ -0.66
SMG6-218ENST00000575454 GUCY1A2P33402 732 aa10.92□□□□□ -0.66
SMG6-218ENST00000575454 PLCD1P51178 756 aa10.92□□□□□ -0.66
SMG6-218ENST00000575454 FPGSQ05932 587 aa10.92□□□□□ -0.66
SMG6-218ENST00000575454 ANO1Q5XXA6 986 aa10.92□□□□□ -0.66
SMG6-218ENST00000575454 TMEM179Q6ZVK1 233 aa10.92□□□□□ -0.66
SMG6-218ENST00000575454 SH3RF1Q7Z6J0 888 aa10.92□□□□□ -0.66
SMG6-218ENST00000575454 CRNKL1Q9BZJ0 848 aaKnown RBP10.92□□□□□ -0.66
SMG6-218ENST00000575454 ARHGEF10LQ9HCE6 1279 aa10.92□□□□□ -0.66
SMG6-218ENST00000575454 TMEM39AQ9NV64 488 aa10.92□□□□□ -0.66
SMG6-218ENST00000575454 SWAP70Q9UH65 585 aa10.92□□□□□ -0.66
SMG6-218ENST00000575454 DBNLQ9UJU6 430 aaKnown RBP10.92□□□□□ -0.66
SMG6-218ENST00000575454 NOP58Q9Y2X3 529 aaKnown RBP10.92□□□□□ -0.66
SMG6-218ENST00000575454 MAGEB6P1A0A0J9YX57 407 aa10.91□□□□□ -0.66
SMG6-218ENST00000575454 DCDC2CA8MYV0 355 aa10.91□□□□□ -0.66
SMG6-218ENST00000575454 TNFRSF10AO00220 468 aa10.91□□□□□ -0.66
SMG6-218ENST00000575454 FLOT1O75955 427 aa10.91□□□□□ -0.66
SMG6-218ENST00000575454 COPB2P35606 906 aa10.91□□□□□ -0.66
SMG6-218ENST00000575454 GABPAQ06546 454 aa10.91□□□□□ -0.66
SMG6-218ENST00000575454 KCTD2Q14681 263 aa10.91□□□□□ -0.66
SMG6-218ENST00000575454 TTF1Q15361 905 aaPredicted RBP10.91□□□□□ -0.66
SMG6-218ENST00000575454 FAM47AQ5JRC9 791 aa10.91□□□□□ -0.66
SMG6-218ENST00000575454 PRAMEF19Q5SWL8 479 aa10.91□□□□□ -0.66
SMG6-218ENST00000575454 NUP133Q8WUM0 1156 aa10.91□□□□□ -0.66
SMG6-218ENST00000575454 FRAT1Q92837 279 aaPredicted RBP10.91□□□□□ -0.66
SMG6-218ENST00000575454 TSEN34Q9BSV6 310 aaKnown RBP10.91□□□□□ -0.66
SMG6-218ENST00000575454 MCM9Q9NXL9 1143 aa10.91□□□□□ -0.66
SMG6-218ENST00000575454 CNPY2Q9Y2B0 182 aa10.91□□□□□ -0.66
SMG6-218ENST00000575454 DIS3Q9Y2L1 958 aaKnown RBP10.91□□□□□ -0.66
SMG6-218ENST00000575454 PHIPQ8WWQ0 1821 aa10.91□□□□□ -0.66
SMG6-218ENST00000575454 A0A1W2PRG0 241 aa10.9□□□□□ -0.66
SMG6-218ENST00000575454 PQBP1O60828 265 aaKnown RBP10.9□□□□□ -0.66
SMG6-218ENST00000575454 AKR1A1P14550 325 aa10.9□□□□□ -0.66
SMG6-218ENST00000575454 GRIN2CQ14957 1233 aa10.9□□□□□ -0.66
SMG6-218ENST00000575454 ANKRD33Q7Z3H0 272 aa10.9□□□□□ -0.66
SMG6-218ENST00000575454 ERC1Q8IUD2 1116 aa10.9□□□□□ -0.66
SMG6-218ENST00000575454 MSL3Q8N5Y2 521 aaKnown RBP10.9□□□□□ -0.66
SMG6-218ENST00000575454 ATXN2LQ8WWM7 1075 aaKnown RBP10.9□□□□□ -0.66
SMG6-218ENST00000575454 TIFAQ96CG3 184 aa10.9□□□□□ -0.66
SMG6-218ENST00000575454 MMP19Q99542 508 aa10.9□□□□□ -0.66
SMG6-218ENST00000575454 RIOK1Q9BRS2 568 aaKnown RBP10.9□□□□□ -0.66
SMG6-218ENST00000575454 TINF2Q9BSI4 451 aa10.9□□□□□ -0.66
SMG6-218ENST00000575454 CCDC8Q9H0W5 538 aaPredicted RBP10.9□□□□□ -0.66
SMG6-218ENST00000575454 TMX2Q9Y320 296 aa10.9□□□□□ -0.66
SMG6-218ENST00000575454 MYH2Q9UKX2 1941 aa10.9□□□□□ -0.67
SMG6-218ENST00000575454 NCOR1O75376 2440 aa10.89□□□□□ -0.67
SMG6-218ENST00000575454 A0A1W2PQ45 241 aaPredicted RBP10.89□□□□□ -0.67
SMG6-218ENST00000575454 A0A1W2PQY0 241 aa10.89□□□□□ -0.67
SMG6-218ENST00000575454 MOXD2PA6NHM9 499 aa10.89□□□□□ -0.67
SMG6-218ENST00000575454 WDR46O15213 610 aaKnown RBP10.89□□□□□ -0.67
SMG6-218ENST00000575454 BCAR3O75815 825 aa10.89□□□□□ -0.67
SMG6-218ENST00000575454 DNAJB2P25686 324 aa10.89□□□□□ -0.67
SMG6-218ENST00000575454 ZKSCAN2Q63HK3 967 aa10.89□□□□□ -0.67
SMG6-218ENST00000575454 SLC44A5Q8NCS7 719 aa10.89□□□□□ -0.67
SMG6-218ENST00000575454 CLUAP1Q96AJ1 413 aa10.89□□□□□ -0.67
SMG6-218ENST00000575454 EAF2Q96CJ1 260 aaPredicted RBP10.89□□□□□ -0.67
SMG6-218ENST00000575454 ATG4CQ96DT6 458 aa10.89□□□□□ -0.67
SMG6-218ENST00000575454 CCDC17Q96LX7 622 aa10.89□□□□□ -0.67
SMG6-218ENST00000575454 GAS2L1Q99501 681 aaPredicted RBP10.89□□□□□ -0.67
SMG6-218ENST00000575454 ZNF576Q9H609 170 aa10.89□□□□□ -0.67
SMG6-218ENST00000575454 VCPKMTQ9H867 229 aa10.89□□□□□ -0.67
SMG6-218ENST00000575454 ROBO3Q96MS0 1386 aa10.89□□□□□ -0.67
SMG6-218ENST00000575454 MROH7Q68CQ1 1323 aa10.88□□□□□ -0.67
SMG6-218ENST00000575454 PTPRFP10586 1907 aa10.88□□□□□ -0.67
SMG6-218ENST00000575454 PGK1P00558 417 aa10.88□□□□□ -0.67
SMG6-218ENST00000575454 TIMP1P01033 207 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms