RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-212ENST00000575116 ANKRD13AQ8IZ07 590 aa13.88□□□□□ -0.19
PRPF8-212ENST00000575116 CTCFLQ8NI51 663 aaPredicted RBP13.88□□□□□ -0.19
PRPF8-212ENST00000575116 NUP133Q8WUM0 1156 aa13.88□□□□□ -0.19
PRPF8-212ENST00000575116 ZKSCAN4Q969J2 545 aaPredicted RBP13.88□□□□□ -0.19
PRPF8-212ENST00000575116 WDR18Q9BV38 432 aa13.88□□□□□ -0.19
PRPF8-212ENST00000575116 PICK1Q9NRD5 415 aa13.88□□□□□ -0.19
PRPF8-212ENST00000575116 FAM217BQ9NTX9 383 aaPredicted RBP13.88□□□□□ -0.19
PRPF8-212ENST00000575116 TMX2Q9Y320 296 aa13.88□□□□□ -0.19
PRPF8-212ENST00000575116 DOCK1Q14185 1865 aa13.88□□□□□ -0.19
PRPF8-212ENST00000575116 UTRNP46939 3433 aa13.88□□□□□ -0.19
PRPF8-212ENST00000575116 MYH4Q9Y623 1939 aa13.88□□□□□ -0.19
PRPF8-212ENST00000575116 CPLX1O14810 134 aa13.87□□□□□ -0.19
PRPF8-212ENST00000575116 ITGBL1O95965 494 aaPredicted RBP13.87□□□□□ -0.19
PRPF8-212ENST00000575116 PTPRAP18433 802 aa13.87□□□□□ -0.19
PRPF8-212ENST00000575116 SMARCA1P28370 1054 aa13.87□□□□□ -0.19
PRPF8-212ENST00000575116 CDC27P30260 824 aa13.87□□□□□ -0.19
PRPF8-212ENST00000575116 ADD1P35611 737 aaKnown RBP13.87□□□□□ -0.19
PRPF8-212ENST00000575116 ATP2B2Q01814 1243 aa13.87□□□□□ -0.19
PRPF8-212ENST00000575116 ST3GAL1Q11201 340 aa13.87□□□□□ -0.19
PRPF8-212ENST00000575116 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.87□□□□□ -0.19
PRPF8-212ENST00000575116 SMARCC2Q8TAQ2 1214 aa13.87□□□□□ -0.19
PRPF8-212ENST00000575116 DCAF4Q8WV16 495 aa13.87□□□□□ -0.19
PRPF8-212ENST00000575116 LZTS2Q9BRK4 669 aa13.87□□□□□ -0.19
PRPF8-212ENST00000575116 MYL10Q9BUA6 226 aa13.87□□□□□ -0.19
PRPF8-212ENST00000575116 NCOA5Q9HCD5 579 aaKnown RBP13.87□□□□□ -0.19
PRPF8-212ENST00000575116 GOPCQ9HD26 462 aa13.87□□□□□ -0.19
PRPF8-212ENST00000575116 CSADQ9Y600 493 aa13.87□□□□□ -0.19
PRPF8-212ENST00000575116 A0A1W2PRG0 241 aa13.86□□□□□ -0.19
PRPF8-212ENST00000575116 PALM3A6NDB9 673 aaPredicted RBP13.86□□□□□ -0.19
PRPF8-212ENST00000575116 F5H6K3 240 aa13.86□□□□□ -0.19
PRPF8-212ENST00000575116 TRAF5O00463 557 aa13.86□□□□□ -0.19
PRPF8-212ENST00000575116 PARP1P09874 1014 aaKnown RBP13.86□□□□□ -0.19
PRPF8-212ENST00000575116 PDHBP11177 359 aa13.86□□□□□ -0.19
PRPF8-212ENST00000575116 PDIA4P13667 645 aaKnown RBP13.86□□□□□ -0.19
PRPF8-212ENST00000575116 IFNAR1P17181 557 aa13.86□□□□□ -0.19
PRPF8-212ENST00000575116 HMGN5P82970 282 aaKnown RBP13.86□□□□□ -0.19
PRPF8-212ENST00000575116 KLRC3Q07444 240 aa13.86□□□□□ -0.19
PRPF8-212ENST00000575116 PRKG1Q13976 671 aa13.86□□□□□ -0.19
PRPF8-212ENST00000575116 TTLL12Q14166 644 aaPredicted RBP13.86□□□□□ -0.19
PRPF8-212ENST00000575116 NTRK3Q16288 839 aa13.86□□□□□ -0.19
PRPF8-212ENST00000575116 ASPRV1Q53RT3 343 aa13.86□□□□□ -0.19
PRPF8-212ENST00000575116 GPATCH4Q5T3I0 446 aaKnown RBP13.86□□□□□ -0.19
PRPF8-212ENST00000575116 LDLRAD1Q5T700 205 aa13.86□□□□□ -0.19
PRPF8-212ENST00000575116 CLEC10AQ8IUN9 316 aa13.86□□□□□ -0.19
PRPF8-212ENST00000575116 LRRC47Q8N1G4 583 aaKnown RBP13.86□□□□□ -0.19
PRPF8-212ENST00000575116 GMCL1Q96IK5 515 aa13.86□□□□□ -0.19
PRPF8-212ENST00000575116 KIAA1683Q9H0B3 1180 aa13.86□□□□□ -0.19
PRPF8-212ENST00000575116 MAD2L2Q9UI95 211 aa13.86□□□□□ -0.19
PRPF8-212ENST00000575116 FZD1Q9UP38 647 aa13.86□□□□□ -0.19
PRPF8-212ENST00000575116 SMC3Q9UQE7 1217 aa13.86□□□□□ -0.19
PRPF8-212ENST00000575116 C19orf81C9J6K1 198 aa13.85□□□□□ -0.19
PRPF8-212ENST00000575116 USP17L10C9JJH3 530 aa13.85□□□□□ -0.19
PRPF8-212ENST00000575116 KIF3CO14782 793 aa13.85□□□□□ -0.19
PRPF8-212ENST00000575116 CTDNEP1O95476 244 aa13.85□□□□□ -0.19
PRPF8-212ENST00000575116 RXRAP19793 462 aa13.85□□□□□ -0.19
PRPF8-212ENST00000575116 USP14P54578 494 aa13.85□□□□□ -0.19
PRPF8-212ENST00000575116 VGLL4Q14135 290 aa13.85□□□□□ -0.19
PRPF8-212ENST00000575116 SLFN13Q68D06 897 aa13.85□□□□□ -0.19
PRPF8-212ENST00000575116 RAB11FIP4Q86YS3 637 aa13.85□□□□□ -0.19
PRPF8-212ENST00000575116 CCDC144CPQ8IYA2 1237 aa13.85□□□□□ -0.19
PRPF8-212ENST00000575116 C2orf69Q8N8R5 385 aa13.85□□□□□ -0.19
PRPF8-212ENST00000575116 ZNF280CQ8ND82 737 aa13.85□□□□□ -0.19
PRPF8-212ENST00000575116 NSUN7Q8NE18 718 aaKnown RBP13.85□□□□□ -0.19
PRPF8-212ENST00000575116 ACER1Q8TDN7 264 aa13.85□□□□□ -0.19
PRPF8-212ENST00000575116 VCPKMTQ9H867 229 aa13.85□□□□□ -0.19
PRPF8-212ENST00000575116 KIF3AQ9Y496 699 aa13.85□□□□□ -0.19
PRPF8-212ENST00000575116 SNCAIPQ9Y6H5 919 aa13.85□□□□□ -0.19
PRPF8-212ENST00000575116 PAPPA2Q9BXP8 1791 aa13.85□□□□□ -0.19
PRPF8-212ENST00000575116 ECE1P42892 770 aa13.84□□□□□ -0.19
PRPF8-212ENST00000575116 PPATQ06203 517 aa13.84□□□□□ -0.19
PRPF8-212ENST00000575116 SSRP1Q08945 709 aaKnown RBP13.84□□□□□ -0.19
PRPF8-212ENST00000575116 ZNF543Q08ER8 600 aa13.84□□□□□ -0.19
PRPF8-212ENST00000575116 TMTC3Q6ZXV5 915 aa13.84□□□□□ -0.19
PRPF8-212ENST00000575116 ERO1BQ86YB8 467 aa13.84□□□□□ -0.19
PRPF8-212ENST00000575116 SPRYD3Q8NCJ5 442 aa13.84□□□□□ -0.19
PRPF8-212ENST00000575116 SMC1BQ8NDV3 1235 aa13.84□□□□□ -0.19
PRPF8-212ENST00000575116 RGS22Q8NE09 1264 aa13.84□□□□□ -0.19
PRPF8-212ENST00000575116 RBM46Q8TBY0 533 aaKnown RBP13.84□□□□□ -0.19
PRPF8-212ENST00000575116 LPAR1Q92633 364 aa13.84□□□□□ -0.19
PRPF8-212ENST00000575116 GBA2Q9HCG7 927 aaPredicted RBP13.84□□□□□ -0.19
PRPF8-212ENST00000575116 AFG3L2Q9Y4W6 797 aa13.84□□□□□ -0.19
PRPF8-212ENST00000575116 ZHX2Q9Y6X8 837 aa13.84□□□□□ -0.19
PRPF8-212ENST00000575116 PTPDC1A2A3K4 754 aa13.83□□□□□ -0.2
PRPF8-212ENST00000575116 KLRF2D3W0D1 207 aa13.83□□□□□ -0.2
PRPF8-212ENST00000575116 PRPF3O43395 683 aaKnown RBP13.83□□□□□ -0.2
PRPF8-212ENST00000575116 TOMM70O94826 608 aa13.83□□□□□ -0.2
PRPF8-212ENST00000575116 CELF2O95319 508 aaKnown RBP13.83□□□□□ -0.2
PRPF8-212ENST00000575116 FMNL1O95466 1100 aaPredicted RBP13.83□□□□□ -0.2
PRPF8-212ENST00000575116 GJB2P29033 226 aa13.83□□□□□ -0.2
PRPF8-212ENST00000575116 SLC1A4P43007 532 aa13.83□□□□□ -0.2
PRPF8-212ENST00000575116 BACE1P56817 501 aa13.83□□□□□ -0.2
PRPF8-212ENST00000575116 FUT2Q10981 343 aa13.83□□□□□ -0.2
PRPF8-212ENST00000575116 USP17L2Q6R6M4 530 aa13.83□□□□□ -0.2
PRPF8-212ENST00000575116 NBPF11Q86T75 865 aa13.83□□□□□ -0.2
PRPF8-212ENST00000575116 TRIM22Q8IYM9 498 aa13.83□□□□□ -0.2
PRPF8-212ENST00000575116 STAG2Q8N3U4 1231 aa13.83□□□□□ -0.2
PRPF8-212ENST00000575116 FEZ1Q99689 392 aa13.83□□□□□ -0.2
PRPF8-212ENST00000575116 SPZ1Q9BXG8 430 aa13.83□□□□□ -0.2
PRPF8-212ENST00000575116 RNF26Q9BY78 433 aaPredicted RBP13.83□□□□□ -0.2
PRPF8-212ENST00000575116 ZNF408Q9H9D4 720 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms