RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 VIL1P09327 827 aaKnown RBP6.49□□□□□ -1.37
TSR1-203ENST00000575049 CYP27A1Q02318 531 aa6.49□□□□□ -1.37
TSR1-203ENST00000575049 UBE4AQ14139 1066 aa6.49□□□□□ -1.37
TSR1-203ENST00000575049 MPP2Q14168 576 aa6.49□□□□□ -1.37
TSR1-203ENST00000575049 CPSF6Q16630 551 aaKnown RBP eCLIP6.49□□□□□ -1.37
TSR1-203ENST00000575049 OGFOD3Q6PK18 319 aa6.49□□□□□ -1.37
TSR1-203ENST00000575049 KIAA0825Q8IV33 1275 aa6.49□□□□□ -1.37
TSR1-203ENST00000575049 FBXO27Q8NI29 283 aa6.49□□□□□ -1.37
TSR1-203ENST00000575049 MAF1Q9H063 256 aa6.49□□□□□ -1.37
TSR1-203ENST00000575049 HOMER2Q9NSB8 354 aa6.49□□□□□ -1.37
TSR1-203ENST00000575049 GINM1Q9NU53 330 aa6.49□□□□□ -1.37
TSR1-203ENST00000575049 CCDC85CA6NKD9 419 aa6.48□□□□□ -1.37
TSR1-203ENST00000575049 TLR3O15455 904 aaKnown RBP6.48□□□□□ -1.37
TSR1-203ENST00000575049 MAFGO15525 162 aa6.48□□□□□ -1.37
TSR1-203ENST00000575049 SH3BP5O60239 455 aa6.48□□□□□ -1.37
TSR1-203ENST00000575049 PGRP06401 933 aa6.48□□□□□ -1.37
TSR1-203ENST00000575049 FAM87AP0C7U9 286 aa6.48□□□□□ -1.37
TSR1-203ENST00000575049 ZEB1P37275 1124 aaPredicted RBP6.48□□□□□ -1.37
TSR1-203ENST00000575049 PDE4BQ07343 736 aa6.48□□□□□ -1.37
TSR1-203ENST00000575049 NKG7Q16617 165 aa6.48□□□□□ -1.37
TSR1-203ENST00000575049 ZNF765Q7L2R6 523 aa6.48□□□□□ -1.37
TSR1-203ENST00000575049 ARMCX6Q7L4S7 300 aa6.48□□□□□ -1.37
TSR1-203ENST00000575049 HID1Q8IV36 788 aa6.48□□□□□ -1.37
TSR1-203ENST00000575049 RAVER1Q8IY67 606 aaKnown RBP6.48□□□□□ -1.37
TSR1-203ENST00000575049 NME8Q8N427 588 aa6.48□□□□□ -1.37
TSR1-203ENST00000575049 TOP6BLQ8N6T0 577 aa6.48□□□□□ -1.37
TSR1-203ENST00000575049 LRRC3Q9BY71 257 aa6.48□□□□□ -1.37
TSR1-203ENST00000575049 CCDC113Q9H0I3 377 aa6.48□□□□□ -1.37
TSR1-203ENST00000575049 PIM2Q9P1W9 311 aa6.48□□□□□ -1.37
TSR1-203ENST00000575049 STRIP2Q9ULQ0 834 aa6.48□□□□□ -1.37
TSR1-203ENST00000575049 LEMD3Q9Y2U8 911 aa6.48□□□□□ -1.37
TSR1-203ENST00000575049 CORINQ9Y5Q5 1042 aa6.48□□□□□ -1.37
TSR1-203ENST00000575049 ROBO2Q9HCK4 1378 aa6.47□□□□□ -1.37
TSR1-203ENST00000575049 LEFTY1O75610 366 aa6.47□□□□□ -1.37
TSR1-203ENST00000575049 LRIG2O94898 1065 aa6.47□□□□□ -1.37
TSR1-203ENST00000575049 CAP2P40123 477 aa6.47□□□□□ -1.37
TSR1-203ENST00000575049 CRKP46108 304 aa6.47□□□□□ -1.37
TSR1-203ENST00000575049 EVA1CP58658 441 aa6.47□□□□□ -1.37
TSR1-203ENST00000575049 SQSTM1Q13501 440 aa6.47□□□□□ -1.37
TSR1-203ENST00000575049 FAM50AQ14320 339 aaKnown RBP6.47□□□□□ -1.37
TSR1-203ENST00000575049 SLBPQ14493 270 aaKnown RBP eCLIP6.47□□□□□ -1.371e-12■■□□□ 13.2
TSR1-203ENST00000575049 CYP27C1Q4G0S4 372 aa6.47□□□□□ -1.37
TSR1-203ENST00000575049 DUSP27Q5VZP5 1158 aa6.47□□□□□ -1.37
TSR1-203ENST00000575049 C16orf86Q6ZW13 317 aa6.47□□□□□ -1.37
TSR1-203ENST00000575049 REC114Q7Z4M0 266 aa6.47□□□□□ -1.37
TSR1-203ENST00000575049 TSR2Q969E8 191 aaKnown RBP6.47□□□□□ -1.37
TSR1-203ENST00000575049 RELTQ969Z4 430 aa6.47□□□□□ -1.37
TSR1-203ENST00000575049 DUSP23Q9BVJ7 150 aa6.47□□□□□ -1.37
TSR1-203ENST00000575049 FOXQ1Q9C009 403 aa6.47□□□□□ -1.37
TSR1-203ENST00000575049 TMEM260Q9NX78 707 aa6.47□□□□□ -1.37
TSR1-203ENST00000575049 PRKAG3Q9UGI9 489 aa6.47□□□□□ -1.37
TSR1-203ENST00000575049 TCEAL9Q9UHQ7 104 aa6.47□□□□□ -1.37
TSR1-203ENST00000575049 PNMA2Q9UL42 364 aa6.47□□□□□ -1.37
TSR1-203ENST00000575049 POLR3KQ9Y2Y1 108 aaPredicted RBP6.47□□□□□ -1.37
TSR1-203ENST00000575049 MSRB2Q9Y3D2 182 aa6.47□□□□□ -1.37
TSR1-203ENST00000575049 GRIN3BO60391 1043 aa6.46□□□□□ -1.38
TSR1-203ENST00000575049 COBLO75128 1261 aa6.46□□□□□ -1.38
TSR1-203ENST00000575049 PLCG1P19174 1290 aa6.46□□□□□ -1.38
TSR1-203ENST00000575049 SOX9P48436 509 aa6.46□□□□□ -1.38
TSR1-203ENST00000575049 EXOSC10Q01780 885 aaKnown RBP6.46□□□□□ -1.38
TSR1-203ENST00000575049 CWF19L2Q2TBE0 894 aaKnown RBP6.46□□□□□ -1.38
TSR1-203ENST00000575049 TKFCQ3LXA3 575 aa6.46□□□□□ -1.38
TSR1-203ENST00000575049 ZFYVE27Q5T4F4 411 aa6.46□□□□□ -1.38
TSR1-203ENST00000575049 CCSAPQ6IQ19 270 aaPredicted RBP6.46□□□□□ -1.38
TSR1-203ENST00000575049 C11orf96Q7Z7L8 435 aa6.46□□□□□ -1.38
TSR1-203ENST00000575049 EAF1Q96JC9 268 aaPredicted RBP6.46□□□□□ -1.38
TSR1-203ENST00000575049 FEZ1Q99689 392 aa6.46□□□□□ -1.38
TSR1-203ENST00000575049 PRDM10Q9NQV6 1147 aa6.46□□□□□ -1.38
TSR1-203ENST00000575049 UBP1Q9NZI7 540 aa6.46□□□□□ -1.38
TSR1-203ENST00000575049 TJP2Q9UDY2 1190 aa6.46□□□□□ -1.38
TSR1-203ENST00000575049 ADAM30Q9UKF2 790 aa6.46□□□□□ -1.38
TSR1-203ENST00000575049 CYP26A1O43174 497 aa6.45□□□□□ -1.38
TSR1-203ENST00000575049 CST3P01034 146 aaPredicted RBP6.45□□□□□ -1.38
TSR1-203ENST00000575049 FOSL1P15407 271 aa6.45□□□□□ -1.38
TSR1-203ENST00000575049 GNALP38405 381 aa6.45□□□□□ -1.38
TSR1-203ENST00000575049 GRIK1P39086 918 aa6.45□□□□□ -1.38
TSR1-203ENST00000575049 CDKN1CP49918 316 aaPredicted RBP6.45□□□□□ -1.38
TSR1-203ENST00000575049 APOBRQ0VD83 1088 aa6.45□□□□□ -1.38
TSR1-203ENST00000575049 LONRF3Q496Y0 759 aa6.45□□□□□ -1.38
TSR1-203ENST00000575049 BRDTQ58F21 947 aaPredicted RBP6.45□□□□□ -1.38
TSR1-203ENST00000575049 PRAMEF13Q5VWM6 474 aa6.45□□□□□ -1.38
TSR1-203ENST00000575049 INTS5Q6P9B9 1019 aaKnown RBP6.45□□□□□ -1.38
TSR1-203ENST00000575049 KRT26Q7Z3Y9 468 aa6.45□□□□□ -1.38
TSR1-203ENST00000575049 JAMLQ86YT9 394 aa6.45□□□□□ -1.38
TSR1-203ENST00000575049 MRPL41Q8IXM3 137 aaKnown RBP6.45□□□□□ -1.38
TSR1-203ENST00000575049 ACSF2Q96CM8 615 aaPredicted RBP6.45□□□□□ -1.38
TSR1-203ENST00000575049 TMEM87BQ96K49 555 aa6.45□□□□□ -1.38
TSR1-203ENST00000575049 APBA2Q99767 749 aa6.45□□□□□ -1.38
TSR1-203ENST00000575049 NT5C1AQ9BXI3 368 aa6.45□□□□□ -1.38
TSR1-203ENST00000575049 R3HCC1Q9Y3T6 440 aaKnown RBP6.45□□□□□ -1.38
TSR1-203ENST00000575049 LAS1LQ9Y4W2 734 aaKnown RBP6.45□□□□□ -1.38
TSR1-203ENST00000575049 PRR36Q9H6K5 1346 aa6.45□□□□□ -1.38
TSR1-203ENST00000575049 CCDC180Q9P1Z9 1646 aa6.44□□□□□ -1.38
TSR1-203ENST00000575049 SCO2A0A1W2PP80 73 aa6.44□□□□□ -1.38
TSR1-203ENST00000575049 KIF3BO15066 747 aa6.44□□□□□ -1.38
TSR1-203ENST00000575049 HTR3BO95264 441 aa6.44□□□□□ -1.38
TSR1-203ENST00000575049 HOXA10P31260 410 aaPredicted RBP6.44□□□□□ -1.38
TSR1-203ENST00000575049 SSTR4P31391 388 aa6.44□□□□□ -1.38
TSR1-203ENST00000575049 CD97P48960 835 aa6.44□□□□□ -1.38
TSR1-203ENST00000575049 SETQ01105 290 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms