RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 SMIM22K7EJ46 135 aa25.41■■□□□ 1.66
CHRNB1-206ENST00000574054 CDK8P49336 464 aa25.41■■□□□ 1.66
CHRNB1-206ENST00000574054 FXR1P51114 621 aaKnown RBP eCLIP25.41■■□□□ 1.66
CHRNB1-206ENST00000574054 MAP2K5Q13163 448 aa25.41■■□□□ 1.66
CHRNB1-206ENST00000574054 ANKLE1Q8NAG6 615 aa25.41■■□□□ 1.66
CHRNB1-206ENST00000574054 ARHGEF10LQ9HCE6 1279 aa25.41■■□□□ 1.66
CHRNB1-206ENST00000574054 IVNS1ABPQ9Y6Y0 642 aa25.41■■□□□ 1.66
CHRNB1-206ENST00000574054 MYH7P12883 1935 aa25.41■■□□□ 1.66
CHRNB1-206ENST00000574054 CACNB2Q08289 660 aaPredicted RBP25.4■■□□□ 1.66
CHRNB1-206ENST00000574054 SLC15A5A6NIM6 579 aa25.39■■□□□ 1.66
CHRNB1-206ENST00000574054 COG2Q14746 738 aa25.39■■□□□ 1.66
CHRNB1-206ENST00000574054 C16orf86Q6ZW13 317 aa25.39■■□□□ 1.66
CHRNB1-206ENST00000574054 SPICE1Q8N0Z3 855 aa25.39■■□□□ 1.66
CHRNB1-206ENST00000574054 CCDC17Q96LX7 622 aa25.39■■□□□ 1.66
CHRNB1-206ENST00000574054 SH2D4AQ9H788 454 aa25.39■■□□□ 1.66
CHRNB1-206ENST00000574054 PTPREP23469 700 aa25.38■■□□□ 1.65
CHRNB1-206ENST00000574054 ATP2B2Q01814 1243 aa25.38■■□□□ 1.65
CHRNB1-206ENST00000574054 KIAA1755Q5JYT7 1200 aa25.38■■□□□ 1.65
CHRNB1-206ENST00000574054 CTR9Q6PD62 1173 aa25.38■■□□□ 1.65
CHRNB1-206ENST00000574054 SAMD1Q6SPF0 538 aaPredicted RBP25.38■■□□□ 1.65
CHRNB1-206ENST00000574054 NBPF3Q9H094 633 aa25.38■■□□□ 1.65
CHRNB1-206ENST00000574054 HOXC10Q9NYD6 342 aa25.38■■□□□ 1.65
CHRNB1-206ENST00000574054 OGDHLQ9ULD0 1010 aa25.38■■□□□ 1.65
CHRNB1-206ENST00000574054 MYH8P13535 1937 aa25.37■■□□□ 1.65
CHRNB1-206ENST00000574054 CCND3P30281 292 aaPredicted RBP25.37■■□□□ 1.65
CHRNB1-206ENST00000574054 KBTBD3Q8NAB2 608 aa25.37■■□□□ 1.65
CHRNB1-206ENST00000574054 LPAR1Q92633 364 aa25.37■■□□□ 1.65
CHRNB1-206ENST00000574054 RBM27Q9P2N5 1060 aaKnown RBP25.37■■□□□ 1.65
CHRNB1-206ENST00000574054 MFSD14CQ5VZR4 134 aa25.36■■□□□ 1.65
CHRNB1-206ENST00000574054 SIAH1Q8IUQ4 282 aa25.36■■□□□ 1.65
CHRNB1-206ENST00000574054 STRBPQ96SI9 672 aaKnown RBP25.36■■□□□ 1.65
CHRNB1-206ENST00000574054 C11orf49Q9H6J7 331 aa25.36■■□□□ 1.65
CHRNB1-206ENST00000574054 VCPKMTQ9H867 229 aa25.36■■□□□ 1.65
CHRNB1-206ENST00000574054 TMX2Q9Y320 296 aa25.36■■□□□ 1.65
CHRNB1-206ENST00000574054 FLOT1O75955 427 aa25.35■■□□□ 1.65
CHRNB1-206ENST00000574054 GRB14Q14449 540 aa25.35■■□□□ 1.65
CHRNB1-206ENST00000574054 PLS1Q14651 629 aa25.35■■□□□ 1.65
CHRNB1-206ENST00000574054 MOV10L1Q9BXT6 1211 aaKnown RBP25.35■■□□□ 1.65
CHRNB1-206ENST00000574054 SPATC1LQ9H0A9 340 aa25.35■■□□□ 1.65
CHRNB1-206ENST00000574054 FLRT1Q9NZU1 646 aa25.35■■□□□ 1.65
CHRNB1-206ENST00000574054 ARPP21Q9UBL0 812 aaPredicted RBP25.35■■□□□ 1.65
CHRNB1-206ENST00000574054 MNX1P50219 401 aaPredicted RBP25.34■■□□□ 1.65
CHRNB1-206ENST00000574054 C7orf61Q8IZ16 206 aa25.34■■□□□ 1.65
CHRNB1-206ENST00000574054 STK11IPQ8N1F8 1099 aa25.34■■□□□ 1.65
CHRNB1-206ENST00000574054 APPBP2Q92624 585 aa25.34■■□□□ 1.65
CHRNB1-206ENST00000574054 OSBP2Q969R2 916 aa25.34■■□□□ 1.65
CHRNB1-206ENST00000574054 PCDHB15Q9Y5E8 787 aa25.34■■□□□ 1.65
CHRNB1-206ENST00000574054 RNF113AO15541 343 aaKnown RBP25.33■■□□□ 1.65
CHRNB1-206ENST00000574054 RAD21O60216 631 aa25.33■■□□□ 1.65
CHRNB1-206ENST00000574054 EEF2P13639 858 aaKnown RBP25.33■■□□□ 1.65
CHRNB1-206ENST00000574054 DSG3P32926 999 aa25.33■■□□□ 1.65
CHRNB1-206ENST00000574054 MB21D1Q8N884 522 aa25.33■■□□□ 1.65
CHRNB1-206ENST00000574054 ATG4CQ96DT6 458 aa25.33■■□□□ 1.65
CHRNB1-206ENST00000574054 KANSL2Q9H9L4 492 aa25.33■■□□□ 1.65
CHRNB1-206ENST00000574054 GSG1L2A8MUP6 293 aa25.32■■□□□ 1.64
CHRNB1-206ENST00000574054 WDR46O15213 610 aaKnown RBP25.32■■□□□ 1.64
CHRNB1-206ENST00000574054 DPP9Q86TI2 863 aa25.32■■□□□ 1.64
CHRNB1-206ENST00000574054 NPLOC4Q8TAT6 608 aa25.32■■□□□ 1.64
CHRNB1-206ENST00000574054 MINDY4BA8MYZ0 360 aa25.31■■□□□ 1.64
CHRNB1-206ENST00000574054 ZFYP08048 801 aaPredicted RBP25.31■■□□□ 1.64
CHRNB1-206ENST00000574054 HOXC6P09630 235 aa25.31■■□□□ 1.64
CHRNB1-206ENST00000574054 ERCC3P19447 782 aa25.31■■□□□ 1.64
CHRNB1-206ENST00000574054 ADORA2AP29274 412 aa25.31■■□□□ 1.64
CHRNB1-206ENST00000574054 LHX8Q68G74 356 aa25.31■■□□□ 1.64
CHRNB1-206ENST00000574054 MKNK2Q9HBH9 465 aa25.31■■□□□ 1.64
CHRNB1-206ENST00000574054 GOPCQ9HD26 462 aa25.31■■□□□ 1.64
CHRNB1-206ENST00000574054 APPP05067 770 aa25.3■■□□□ 1.64
CHRNB1-206ENST00000574054 CNGA1P29973 690 aa25.3■■□□□ 1.64
CHRNB1-206ENST00000574054 CYP2C19P33261 490 aa25.3■■□□□ 1.64
CHRNB1-206ENST00000574054 SBK1Q52WX2 424 aa25.3■■□□□ 1.64
CHRNB1-206ENST00000574054 GIMAP6Q6P9H5 292 aa25.3■■□□□ 1.64
CHRNB1-206ENST00000574054 NCAPG2Q86XI2 1143 aa25.3■■□□□ 1.64
CHRNB1-206ENST00000574054 SHCBP1Q8NEM2 672 aa25.3■■□□□ 1.64
CHRNB1-206ENST00000574054 ZMYND8Q9ULU4 1186 aaPredicted RBP25.3■■□□□ 1.64
CHRNB1-206ENST00000574054 ALPK3Q96L96 1907 aa25.29■■□□□ 1.64
CHRNB1-206ENST00000574054 M0R2C6 588 aa25.29■■□□□ 1.64
CHRNB1-206ENST00000574054 ERC2O15083 957 aa25.29■■□□□ 1.64
CHRNB1-206ENST00000574054 GPAA1O43292 621 aa25.29■■□□□ 1.64
CHRNB1-206ENST00000574054 STRNO43815 780 aa25.29■■□□□ 1.64
CHRNB1-206ENST00000574054 TDO2P48775 406 aa25.29■■□□□ 1.64
CHRNB1-206ENST00000574054 RRP1P56182 461 aaKnown RBP25.29■■□□□ 1.64
CHRNB1-206ENST00000574054 LRRFIP1Q32MZ4 808 aaKnown RBP25.29■■□□□ 1.64
CHRNB1-206ENST00000574054 PRO3102Q9H379 93 aa25.29■■□□□ 1.64
CHRNB1-206ENST00000574054 DNAH12Q6ZR08 3092 aa25.29■■□□□ 1.64
CHRNB1-206ENST00000574054 RLFQ13129 1914 aa25.28■■□□□ 1.64
CHRNB1-206ENST00000574054 GNAT2P19087 354 aa25.28■■□□□ 1.64
CHRNB1-206ENST00000574054 OTUD7AQ8TE49 926 aaPredicted RBP25.28■■□□□ 1.64
CHRNB1-206ENST00000574054 MROH8Q9H579 483 aa25.28■■□□□ 1.64
CHRNB1-206ENST00000574054 FBXO28Q9NVF7 368 aa25.28■■□□□ 1.64
CHRNB1-206ENST00000574054 STAP2Q9UGK3 403 aa25.28■■□□□ 1.64
CHRNB1-206ENST00000574054 PFASO15067 1338 aa25.28■■□□□ 1.64
CHRNB1-206ENST00000574054 TTC41PQ6P2S7 1318 aa25.28■■□□□ 1.64
CHRNB1-206ENST00000574054 A0A0G2JMZ2 1700 aa25.28■■□□□ 1.64
CHRNB1-206ENST00000574054 RASA1P20936 1047 aa25.27■■□□□ 1.64
CHRNB1-206ENST00000574054 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.27■■□□□ 1.64
CHRNB1-206ENST00000574054 EPB41L4AQ9HCS5 686 aaPredicted RBP25.27■■□□□ 1.64
CHRNB1-206ENST00000574054 TMEM132BQ14DG7 1078 aa25.26■■□□□ 1.63
CHRNB1-206ENST00000574054 FAM83BQ5T0W9 1011 aa25.26■■□□□ 1.63
CHRNB1-206ENST00000574054 FSD1Q9BTV5 496 aa25.26■■□□□ 1.63
CHRNB1-206ENST00000574054 SLC5A4Q9NY91 659 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms