RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 ATP2B2Q01814 1243 aa20.37■□□□□ 0.85
LITAF-212ENST00000573332 TRDNQ13061 729 aa20.37■□□□□ 0.85
LITAF-212ENST00000573332 ZYXQ15942 572 aaKnown RBP20.37■□□□□ 0.85
LITAF-212ENST00000573332 TSGA10IPQ3SY00 556 aa20.37■□□□□ 0.85
LITAF-212ENST00000573332 CCDC178Q5BJE1 867 aa20.37■□□□□ 0.85
LITAF-212ENST00000573332 RNF20Q5VTR2 975 aa20.37■□□□□ 0.85
LITAF-212ENST00000573332 R3HDMLQ9H3Y0 253 aa20.37■□□□□ 0.85
LITAF-212ENST00000573332 GOPCQ9HD26 462 aa20.37■□□□□ 0.85
LITAF-212ENST00000573332 ZSWIM5Q9P217 1185 aa20.37■□□□□ 0.85
LITAF-212ENST00000573332 TAF6LQ9Y6J9 622 aa20.37■□□□□ 0.85
LITAF-212ENST00000573332 ADGRA2Q96PE1 1338 aa20.36■□□□□ 0.85
LITAF-212ENST00000573332 USP17L15C9J2P7 530 aa20.36■□□□□ 0.85
LITAF-212ENST00000573332 USP17L13C9JLJ4 530 aa20.36■□□□□ 0.85
LITAF-212ENST00000573332 USP17L11C9JVI0 530 aa20.36■□□□□ 0.85
LITAF-212ENST00000573332 USP17L18D6R9N7 530 aa20.36■□□□□ 0.85
LITAF-212ENST00000573332 USP17L22D6RA61 530 aa20.36■□□□□ 0.85
LITAF-212ENST00000573332 USP17L17D6RBQ6 530 aa20.36■□□□□ 0.85
LITAF-212ENST00000573332 USP17L19D6RCP7 530 aa20.36■□□□□ 0.85
LITAF-212ENST00000573332 USP17L20D6RJB6 530 aa20.36■□□□□ 0.85
LITAF-212ENST00000573332 NMT2O60551 498 aa20.36■□□□□ 0.85
LITAF-212ENST00000573332 OSBPP22059 807 aa20.36■□□□□ 0.85
LITAF-212ENST00000573332 USP17L24Q0WX57 530 aa20.36■□□□□ 0.85
LITAF-212ENST00000573332 PCNTO95613 3336 aa20.35■□□□□ 0.85
LITAF-212ENST00000573332 F5H6K3 240 aa20.35■□□□□ 0.85
LITAF-212ENST00000573332 GPR25O00155 361 aa20.35■□□□□ 0.85
LITAF-212ENST00000573332 WDR46O15213 610 aaKnown RBP20.35■□□□□ 0.85
LITAF-212ENST00000573332 KLRC3Q07444 240 aa20.35■□□□□ 0.85
LITAF-212ENST00000573332 KIAA1755Q5JYT7 1200 aa20.35■□□□□ 0.85
LITAF-212ENST00000573332 CATSPERGQ6ZRH7 1159 aa20.35■□□□□ 0.85
LITAF-212ENST00000573332 STOX1Q6ZVD7 989 aa20.35■□□□□ 0.85
LITAF-212ENST00000573332 IQCA1Q86XH1 822 aa20.35■□□□□ 0.85
LITAF-212ENST00000573332 DGKHQ86XP1 1220 aa20.35■□□□□ 0.85
LITAF-212ENST00000573332 GMCL1P1Q8NEA9 526 aa20.35■□□□□ 0.85
LITAF-212ENST00000573332 NCOA7Q8NI08 942 aa20.35■□□□□ 0.85
LITAF-212ENST00000573332 ANKS1AQ92625 1134 aa20.35■□□□□ 0.85
LITAF-212ENST00000573332 KCNB2Q92953 911 aa20.35■□□□□ 0.85
LITAF-212ENST00000573332 ASCC2Q9H1I8 757 aaPredicted RBP20.35■□□□□ 0.85
LITAF-212ENST00000573332 TSKSQ9UJT2 592 aa20.35■□□□□ 0.85
LITAF-212ENST00000573332 STX8Q9UNK0 236 aa20.35■□□□□ 0.85
LITAF-212ENST00000573332 EIF5BO60841 1220 aaKnown RBP20.34■□□□□ 0.85
LITAF-212ENST00000573332 CYP2C8P10632 490 aa20.34■□□□□ 0.85
LITAF-212ENST00000573332 RCSD1Q6JBY9 416 aa20.34■□□□□ 0.85
LITAF-212ENST00000573332 C17orf99Q6UX52 265 aa20.34■□□□□ 0.85
LITAF-212ENST00000573332 RALYLQ86SE5 291 aaKnown RBP20.34■□□□□ 0.85
LITAF-212ENST00000573332 PRDM10Q9NQV6 1147 aa20.34■□□□□ 0.85
LITAF-212ENST00000573332 HSPA4P34932 840 aa20.33■□□□□ 0.85
LITAF-212ENST00000573332 LBX1P52954 281 aa20.33■□□□□ 0.85
LITAF-212ENST00000573332 IRX3P78415 501 aaPredicted RBP20.33■□□□□ 0.85
LITAF-212ENST00000573332 ZSCAN10Q96SZ4 725 aaPredicted RBP20.33■□□□□ 0.85
LITAF-212ENST00000573332 RPAP3Q9H6T3 665 aaPredicted RBP20.33■□□□□ 0.85
LITAF-212ENST00000573332 TOP1P11387 765 aaKnown RBP20.32■□□□□ 0.84
LITAF-212ENST00000573332 ZKSCAN1P17029 563 aaPredicted RBP20.32■□□□□ 0.84
LITAF-212ENST00000573332 GCLCP48506 637 aaPredicted RBP20.32■□□□□ 0.84
LITAF-212ENST00000573332 LBX2Q6XYB7 198 aa20.32■□□□□ 0.84
LITAF-212ENST00000573332 CYB5R4Q7L1T6 521 aa20.32■□□□□ 0.84
LITAF-212ENST00000573332 MB21D2Q8IYB1 491 aaPredicted RBP20.32■□□□□ 0.84
LITAF-212ENST00000573332 SPICE1Q8N0Z3 855 aa20.32■□□□□ 0.84
LITAF-212ENST00000573332 GTF3C2Q8WUA4 911 aaPredicted RBP20.32■□□□□ 0.84
LITAF-212ENST00000573332 P2RX7Q99572 595 aaKnown RBP20.32■□□□□ 0.84
LITAF-212ENST00000573332 TMEM47Q9BQJ4 181 aa20.32■□□□□ 0.84
LITAF-212ENST00000573332 MTA3Q9BTC8 594 aa20.32■□□□□ 0.84
LITAF-212ENST00000573332 USP26Q9BXU7 913 aa20.32■□□□□ 0.84
LITAF-212ENST00000573332 NDUFB10O96000 172 aa20.31■□□□□ 0.84
LITAF-212ENST00000573332 BCRP11274 1271 aa20.31■□□□□ 0.84
LITAF-212ENST00000573332 KRT32Q14532 448 aa20.31■□□□□ 0.84
LITAF-212ENST00000573332 LRRC47Q8N1G4 583 aaKnown RBP20.31■□□□□ 0.84
LITAF-212ENST00000573332 SMCR8Q8TEV9 937 aaPredicted RBP20.31■□□□□ 0.84
LITAF-212ENST00000573332 GMCL1Q96IK5 515 aa20.31■□□□□ 0.84
LITAF-212ENST00000573332 ZKSCAN3Q9BRR0 538 aa20.31■□□□□ 0.84
LITAF-212ENST00000573332 MYPNQ86TC9 1320 aa20.3■□□□□ 0.84
LITAF-212ENST00000573332 FKTNO75072 461 aa20.3■□□□□ 0.84
LITAF-212ENST00000573332 HERVK_113P62684 666 aa20.3■□□□□ 0.84
LITAF-212ENST00000573332 SP3Q02447 781 aa20.3■□□□□ 0.84
LITAF-212ENST00000573332 COG2Q14746 738 aa20.3■□□□□ 0.84
LITAF-212ENST00000573332 SEC23AQ15436 765 aa20.3■□□□□ 0.84
LITAF-212ENST00000573332 SLFN13Q68D06 897 aa20.3■□□□□ 0.84
LITAF-212ENST00000573332 RASEFQ8IZ41 740 aa20.3■□□□□ 0.84
LITAF-212ENST00000573332 ENAHQ8N8S7 591 aaPredicted RBP20.3■□□□□ 0.84
LITAF-212ENST00000573332 ZNF296Q8WUU4 475 aaPredicted RBP20.3■□□□□ 0.84
LITAF-212ENST00000573332 UBAC1Q9BSL1 405 aa20.3■□□□□ 0.84
LITAF-212ENST00000573332 HOXC10Q9NYD6 342 aa20.3■□□□□ 0.84
LITAF-212ENST00000573332 TNKSO95271 1327 aa20.29■□□□□ 0.84
LITAF-212ENST00000573332 MORF4L1Q9UBU8 362 aa20.29■□□□□ 0.84
LITAF-212ENST00000573332 CPA4Q9UI42 421 aa20.29■□□□□ 0.84
LITAF-212ENST00000573332 DSG3P32926 999 aa20.28■□□□□ 0.84
LITAF-212ENST00000573332 MCM5P33992 734 aa20.28■□□□□ 0.84
LITAF-212ENST00000573332 ANTXR2P58335 489 aa20.28■□□□□ 0.84
LITAF-212ENST00000573332 FAM110CQ1W6H9 321 aa20.28■□□□□ 0.84
LITAF-212ENST00000573332 FAM83BQ5T0W9 1011 aa20.28■□□□□ 0.84
LITAF-212ENST00000573332 NEK1Q96PY6 1258 aa20.28■□□□□ 0.84
LITAF-212ENST00000573332 TANGO6Q9C0B7 1094 aa20.28■□□□□ 0.84
LITAF-212ENST00000573332 SPDYE16A6NNV3 312 aaPredicted RBP20.27■□□□□ 0.84
LITAF-212ENST00000573332 RAD21O60216 631 aa20.27■□□□□ 0.84
LITAF-212ENST00000573332 PLA2G6O60733 806 aa20.27■□□□□ 0.84
LITAF-212ENST00000573332 BMP3P12645 472 aa20.27■□□□□ 0.84
LITAF-212ENST00000573332 SART3Q15020 963 aaKnown RBP20.27■□□□□ 0.84
LITAF-212ENST00000573332 C8orf34Q49A92 452 aa20.27■□□□□ 0.84
LITAF-212ENST00000573332 POTEEQ6S8J3 1075 aa20.27■□□□□ 0.84
LITAF-212ENST00000573332 IGDCC4Q8TDY8 1250 aa20.27■□□□□ 0.84
LITAF-212ENST00000573332 DCAF4Q8WV16 495 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms