RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 GTF3C2Q8WUA4 911 aaPredicted RBP14.1□□□□□ -0.15
NDE1-206ENST00000572967 TRIB2Q92519 343 aa14.1□□□□□ -0.15
NDE1-206ENST00000572967 UPF2Q9HAU5 1272 aaKnown RBP14.1□□□□□ -0.15
NDE1-206ENST00000572967 CWC22Q9HCG8 908 aaKnown RBP14.1□□□□□ -0.15
NDE1-206ENST00000572967 SWAP70Q9UH65 585 aa14.1□□□□□ -0.15
NDE1-206ENST00000572967 USP17L15C9J2P7 530 aa14.09□□□□□ -0.15
NDE1-206ENST00000572967 USP17L13C9JLJ4 530 aa14.09□□□□□ -0.15
NDE1-206ENST00000572967 USP17L11C9JVI0 530 aa14.09□□□□□ -0.15
NDE1-206ENST00000572967 USP17L18D6R9N7 530 aa14.09□□□□□ -0.15
NDE1-206ENST00000572967 USP17L22D6RA61 530 aa14.09□□□□□ -0.15
NDE1-206ENST00000572967 USP17L17D6RBQ6 530 aa14.09□□□□□ -0.15
NDE1-206ENST00000572967 USP17L19D6RCP7 530 aa14.09□□□□□ -0.15
NDE1-206ENST00000572967 USP17L20D6RJB6 530 aa14.09□□□□□ -0.15
NDE1-206ENST00000572967 GNAT2P19087 354 aa14.09□□□□□ -0.15
NDE1-206ENST00000572967 CYP2B6P20813 491 aa14.09□□□□□ -0.15
NDE1-206ENST00000572967 ICA1Q05084 483 aa14.09□□□□□ -0.15
NDE1-206ENST00000572967 USP17L24Q0WX57 530 aa14.09□□□□□ -0.15
NDE1-206ENST00000572967 MCMDC2Q4G0Z9 681 aa14.09□□□□□ -0.15
NDE1-206ENST00000572967 ZMYM1Q5SVZ6 1142 aa14.09□□□□□ -0.15
NDE1-206ENST00000572967 WDR78Q5VTH9 848 aa14.09□□□□□ -0.15
NDE1-206ENST00000572967 GPR142Q7Z601 462 aa14.09□□□□□ -0.15
NDE1-206ENST00000572967 CCAR1Q8IX12 1150 aaKnown RBP14.09□□□□□ -0.15
NDE1-206ENST00000572967 SOCS4Q8WXH5 440 aa14.09□□□□□ -0.15
NDE1-206ENST00000572967 DDRGK1Q96HY6 314 aa14.09□□□□□ -0.15
NDE1-206ENST00000572967 DEFB118Q96PH6 123 aa14.09□□□□□ -0.15
NDE1-206ENST00000572967 TANGO6Q9C0B7 1094 aa14.09□□□□□ -0.15
NDE1-206ENST00000572967 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.09□□□□□ -0.15
NDE1-206ENST00000572967 ATP8A2Q9NTI2 1148 aa14.09□□□□□ -0.15
NDE1-206ENST00000572967 RBPJLQ9UBG7 517 aa14.09□□□□□ -0.15
NDE1-206ENST00000572967 A0A1W2PRG0 241 aa14.08□□□□□ -0.16
NDE1-206ENST00000572967 SPDYE16A6NNV3 312 aaPredicted RBP14.08□□□□□ -0.16
NDE1-206ENST00000572967 USP17L12C9JPN9 530 aa14.08□□□□□ -0.16
NDE1-206ENST00000572967 USP17L21D6R901 530 aa14.08□□□□□ -0.16
NDE1-206ENST00000572967 CNMDO75829 334 aa14.08□□□□□ -0.16
NDE1-206ENST00000572967 MAPK4P31152 587 aa14.08□□□□□ -0.16
NDE1-206ENST00000572967 Q3C1V9 767 aa14.08□□□□□ -0.16
NDE1-206ENST00000572967 CWC27Q6UX04 472 aaKnown RBP14.08□□□□□ -0.16
NDE1-206ENST00000572967 TMEM179Q6ZVK1 233 aa14.08□□□□□ -0.16
NDE1-206ENST00000572967 STK11IPQ8N1F8 1099 aa14.08□□□□□ -0.16
NDE1-206ENST00000572967 NUDT12Q9BQG2 462 aa14.08□□□□□ -0.16
NDE1-206ENST00000572967 PAK6Q9NQU5 681 aaPredicted RBP14.08□□□□□ -0.16
NDE1-206ENST00000572967 GJD2Q9UKL4 321 aa14.08□□□□□ -0.16
NDE1-206ENST00000572967 M0R2C6 588 aa14.07□□□□□ -0.16
NDE1-206ENST00000572967 EPB41L2O43491 1005 aaKnown RBP14.07□□□□□ -0.16
NDE1-206ENST00000572967 CDK8P49336 464 aa14.07□□□□□ -0.16
NDE1-206ENST00000572967 NMIQ13287 307 aaPredicted RBP14.07□□□□□ -0.16
NDE1-206ENST00000572967 C12orf60Q5U649 245 aa14.07□□□□□ -0.16
NDE1-206ENST00000572967 SAMD1Q6SPF0 538 aaPredicted RBP14.07□□□□□ -0.16
NDE1-206ENST00000572967 CATSPERGQ6ZRH7 1159 aa14.07□□□□□ -0.16
NDE1-206ENST00000572967 C16orf86Q6ZW13 317 aa14.07□□□□□ -0.16
NDE1-206ENST00000572967 SPICE1Q8N0Z3 855 aa14.07□□□□□ -0.16
NDE1-206ENST00000572967 APBA2Q99767 749 aa14.07□□□□□ -0.16
NDE1-206ENST00000572967 ESYT1Q9BSJ8 1104 aa14.07□□□□□ -0.16
NDE1-206ENST00000572967 NACAP1Q9BZK3 213 aa14.07□□□□□ -0.16
NDE1-206ENST00000572967 ARHGEF10LQ9HCE6 1279 aa14.07□□□□□ -0.16
NDE1-206ENST00000572967 BTBD7Q9P203 1132 aa14.07□□□□□ -0.16
NDE1-206ENST00000572967 ARPP21Q9UBL0 812 aaPredicted RBP14.07□□□□□ -0.16
NDE1-206ENST00000572967 CCDC171Q6TFL3 1326 aa14.07□□□□□ -0.16
NDE1-206ENST00000572967 SGPL1O95470 568 aa14.06□□□□□ -0.16
NDE1-206ENST00000572967 ZKSCAN1P17029 563 aaPredicted RBP14.06□□□□□ -0.16
NDE1-206ENST00000572967 ATP2B2Q01814 1243 aa14.06□□□□□ -0.16
NDE1-206ENST00000572967 CCL14Q16627 93 aa14.06□□□□□ -0.16
NDE1-206ENST00000572967 KIAA1755Q5JYT7 1200 aa14.06□□□□□ -0.16
NDE1-206ENST00000572967 CTR9Q6PD62 1173 aa14.06□□□□□ -0.16
NDE1-206ENST00000572967 PLEKHH3Q7Z736 793 aa14.06□□□□□ -0.16
NDE1-206ENST00000572967 UBE2Q1Q7Z7E8 422 aa14.06□□□□□ -0.16
NDE1-206ENST00000572967 DIS3LQ8TF46 1054 aaKnown RBP14.06□□□□□ -0.16
NDE1-206ENST00000572967 OSBP2Q969R2 916 aa14.06□□□□□ -0.16
NDE1-206ENST00000572967 EPB41L4AQ9HCS5 686 aaPredicted RBP14.06□□□□□ -0.16
NDE1-206ENST00000572967 RABGAP1Q9Y3P9 1069 aa14.06□□□□□ -0.16
NDE1-206ENST00000572967 ROBO3Q96MS0 1386 aa14.06□□□□□ -0.16
NDE1-206ENST00000572967 PLXNA1Q9UIW2 1896 aa14.06□□□□□ -0.16
NDE1-206ENST00000572967 A0A0D9SFI3 127 aa14.05□□□□□ -0.16
NDE1-206ENST00000572967 H0YGN5 161 aa14.05□□□□□ -0.16
NDE1-206ENST00000572967 SGSM2O43147 1006 aa14.05□□□□□ -0.16
NDE1-206ENST00000572967 GPAA1O43292 621 aa14.05□□□□□ -0.16
NDE1-206ENST00000572967 TFRCP02786 760 aaKnown RBP14.05□□□□□ -0.16
NDE1-206ENST00000572967 PRKAR2AP13861 404 aaKnown RBP14.05□□□□□ -0.16
NDE1-206ENST00000572967 MCCP23508 829 aa14.05□□□□□ -0.16
NDE1-206ENST00000572967 RGS2P41220 211 aa14.05□□□□□ -0.16
NDE1-206ENST00000572967 CCNA1P78396 465 aa14.05□□□□□ -0.16
NDE1-206ENST00000572967 DPF3Q92784 378 aa14.05□□□□□ -0.16
NDE1-206ENST00000572967 RAD21O60216 631 aa14.04□□□□□ -0.16
NDE1-206ENST00000572967 TDO2P48775 406 aa14.04□□□□□ -0.16
NDE1-206ENST00000572967 MORN1Q5T089 497 aa14.04□□□□□ -0.16
NDE1-206ENST00000572967 LBX2Q6XYB7 198 aa14.04□□□□□ -0.16
NDE1-206ENST00000572967 FAM227BQ96M60 508 aa14.04□□□□□ -0.16
NDE1-206ENST00000572967 STRBPQ96SI9 672 aaKnown RBP14.04□□□□□ -0.16
NDE1-206ENST00000572967 HTATIP2Q9BUP3 242 aa14.04□□□□□ -0.16
NDE1-206ENST00000572967 HMX1Q9NP08 348 aaPredicted RBP14.04□□□□□ -0.16
NDE1-206ENST00000572967 ANO2Q9NQ90 1003 aa14.04□□□□□ -0.16
NDE1-206ENST00000572967 GSG1L2A8MUP6 293 aa14.03□□□□□ -0.16
NDE1-206ENST00000572967 MINDY4BA8MYZ0 360 aa14.03□□□□□ -0.16
NDE1-206ENST00000572967 FLOT1O75955 427 aa14.03□□□□□ -0.16
NDE1-206ENST00000572967 C8orf34Q49A92 452 aa14.03□□□□□ -0.16
NDE1-206ENST00000572967 GIMAP6Q6P9H5 292 aa14.03□□□□□ -0.16
NDE1-206ENST00000572967 ATG4CQ96DT6 458 aa14.03□□□□□ -0.16
NDE1-206ENST00000572967 CCDC17Q96LX7 622 aa14.03□□□□□ -0.16
NDE1-206ENST00000572967 CRISPLD2Q9H0B8 497 aa14.03□□□□□ -0.16
NDE1-206ENST00000572967 SH2D4AQ9H788 454 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms