RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 NAP1L2Q9ULW6 460 aaPredicted RBP11.08□□□□□ -0.64
NPLOC4-208ENST00000572351 AFG3L2Q9Y4W6 797 aa11.08□□□□□ -0.64
NPLOC4-208ENST00000572351 A0A1W2PRG0 241 aa11.07□□□□□ -0.64
NPLOC4-208ENST00000572351 C19orf81C9J6K1 198 aa11.07□□□□□ -0.64
NPLOC4-208ENST00000572351 SH2B2O14492 632 aaPredicted RBP11.07□□□□□ -0.64
NPLOC4-208ENST00000572351 GJA5P36382 358 aa11.07□□□□□ -0.64
NPLOC4-208ENST00000572351 NEK4P51957 841 aa11.07□□□□□ -0.64
NPLOC4-208ENST00000572351 HMGCS2P54868 508 aa11.07□□□□□ -0.64
NPLOC4-208ENST00000572351 EXOSC10Q01780 885 aaKnown RBP11.07□□□□□ -0.64
NPLOC4-208ENST00000572351 RABEP1Q15276 862 aa11.07□□□□□ -0.64
NPLOC4-208ENST00000572351 GADL1Q6ZQY3 521 aa11.07□□□□□ -0.64
NPLOC4-208ENST00000572351 FASTKD5Q7L8L6 764 aaKnown RBP11.07□□□□□ -0.64
NPLOC4-208ENST00000572351 CATIPQ7Z7H3 387 aa11.07□□□□□ -0.64
NPLOC4-208ENST00000572351 TMTC2Q8N394 836 aa11.07□□□□□ -0.64
NPLOC4-208ENST00000572351 CHMP4CQ96CF2 233 aa11.07□□□□□ -0.64
NPLOC4-208ENST00000572351 KIAA1683Q9H0B3 1180 aa11.07□□□□□ -0.64
NPLOC4-208ENST00000572351 KCNH4Q9UQ05 1017 aa11.07□□□□□ -0.64
NPLOC4-208ENST00000572351 TMX2Q9Y320 296 aa11.07□□□□□ -0.64
NPLOC4-208ENST00000572351 LAMB1P07942 1786 aa11.06□□□□□ -0.64
NPLOC4-208ENST00000572351 CCL15-CCL14A0A0B4J2E2 113 aa11.06□□□□□ -0.64
NPLOC4-208ENST00000572351 A0A0G2JLL6 359 aaPredicted RBP11.06□□□□□ -0.64
NPLOC4-208ENST00000572351 MANSC4A6NHS7 340 aaPredicted RBP11.06□□□□□ -0.64
NPLOC4-208ENST00000572351 F5H6K3 240 aa11.06□□□□□ -0.64
NPLOC4-208ENST00000572351 CETPP11597 493 aa11.06□□□□□ -0.64
NPLOC4-208ENST00000572351 LIFRP42702 1097 aa11.06□□□□□ -0.64
NPLOC4-208ENST00000572351 KLRC3Q07444 240 aa11.06□□□□□ -0.64
NPLOC4-208ENST00000572351 SREBF2Q12772 1141 aa11.06□□□□□ -0.64
NPLOC4-208ENST00000572351 NOGQ13253 232 aa11.06□□□□□ -0.64
NPLOC4-208ENST00000572351 COL9A3Q14050 684 aaPredicted RBP11.06□□□□□ -0.64
NPLOC4-208ENST00000572351 SEC23AQ15436 765 aa11.06□□□□□ -0.64
NPLOC4-208ENST00000572351 CCL15Q16663 113 aa11.06□□□□□ -0.64
NPLOC4-208ENST00000572351 SLFN13Q68D06 897 aa11.06□□□□□ -0.64
NPLOC4-208ENST00000572351 RCSD1Q6JBY9 416 aa11.06□□□□□ -0.64
NPLOC4-208ENST00000572351 PRRT2Q7Z6L0 340 aaPredicted RBP11.06□□□□□ -0.64
NPLOC4-208ENST00000572351 SIAH1Q8IUQ4 282 aa11.06□□□□□ -0.64
NPLOC4-208ENST00000572351 SPICE1Q8N0Z3 855 aa11.06□□□□□ -0.64
NPLOC4-208ENST00000572351 PNMA1Q8ND90 353 aa11.06□□□□□ -0.64
NPLOC4-208ENST00000572351 IGDCC4Q8TDY8 1250 aa11.06□□□□□ -0.64
NPLOC4-208ENST00000572351 NUP133Q8WUM0 1156 aa11.06□□□□□ -0.64
NPLOC4-208ENST00000572351 ANKS1AQ92625 1134 aa11.06□□□□□ -0.64
NPLOC4-208ENST00000572351 LPAR1Q92633 364 aa11.06□□□□□ -0.64
NPLOC4-208ENST00000572351 BRF1Q92994 677 aa11.06□□□□□ -0.64
NPLOC4-208ENST00000572351 MKL1Q969V6 931 aa11.06□□□□□ -0.64
NPLOC4-208ENST00000572351 VCPKMTQ9H867 229 aa11.06□□□□□ -0.64
NPLOC4-208ENST00000572351 GPHNQ9NQX3 736 aaPredicted RBP11.06□□□□□ -0.64
NPLOC4-208ENST00000572351 SYNPO2Q9UMS6 1093 aa11.06□□□□□ -0.64
NPLOC4-208ENST00000572351 SLC12A7Q9Y666 1083 aa11.06□□□□□ -0.64
NPLOC4-208ENST00000572351 SIPA1L1O43166 1804 aa11.06□□□□□ -0.64
NPLOC4-208ENST00000572351 MYH1P12882 1939 aa11.05□□□□□ -0.64
NPLOC4-208ENST00000572351 BAZ2AQ9UIF9 1905 aaKnown RBP11.05□□□□□ -0.64
NPLOC4-208ENST00000572351 FAM155AB1AL88 458 aaPredicted RBP11.05□□□□□ -0.64
NPLOC4-208ENST00000572351 ST18O60284 1047 aa11.05□□□□□ -0.64
NPLOC4-208ENST00000572351 NDUFB10O96000 172 aa11.05□□□□□ -0.64
NPLOC4-208ENST00000572351 SLC1A4P43007 532 aa11.05□□□□□ -0.64
NPLOC4-208ENST00000572351 NOVP48745 357 aa11.05□□□□□ -0.64
NPLOC4-208ENST00000572351 PABPC4Q13310 644 aaKnown RBP eCLIP11.05□□□□□ -0.64
NPLOC4-208ENST00000572351 DGKZQ13574 1117 aa11.05□□□□□ -0.64
NPLOC4-208ENST00000572351 ANKRD1Q15327 319 aa11.05□□□□□ -0.64
NPLOC4-208ENST00000572351 CCDC96Q2M329 555 aa11.05□□□□□ -0.64
NPLOC4-208ENST00000572351 GMCL1P1Q8NEA9 526 aa11.05□□□□□ -0.64
NPLOC4-208ENST00000572351 IL17RAQ96F46 866 aa11.05□□□□□ -0.64
NPLOC4-208ENST00000572351 CDK5RAP2Q96SN8 1893 aa11.05□□□□□ -0.64
NPLOC4-208ENST00000572351 TANGO6Q9C0B7 1094 aa11.05□□□□□ -0.64
NPLOC4-208ENST00000572351 LY9Q9HBG7 655 aa11.05□□□□□ -0.64
NPLOC4-208ENST00000572351 EMILIN3Q9NT22 766 aa11.05□□□□□ -0.64
NPLOC4-208ENST00000572351 WDR33Q9C0J8 1336 aaKnown RBP11.05□□□□□ -0.64
NPLOC4-208ENST00000572351 KLF18A0A0U1RQI7 1052 aa11.04□□□□□ -0.64
NPLOC4-208ENST00000572351 WDR46O15213 610 aaKnown RBP11.04□□□□□ -0.64
NPLOC4-208ENST00000572351 AOC2O75106 756 aa11.04□□□□□ -0.64
NPLOC4-208ENST00000572351 DDAH1O94760 285 aa11.04□□□□□ -0.64
NPLOC4-208ENST00000572351 VCAM1P19320 739 aa11.04□□□□□ -0.64
NPLOC4-208ENST00000572351 VEGFBP49765 207 aa11.04□□□□□ -0.64
NPLOC4-208ENST00000572351 INHBEP58166 350 aa11.04□□□□□ -0.64
NPLOC4-208ENST00000572351 KIF23Q02241 960 aaPredicted RBP11.04□□□□□ -0.64
NPLOC4-208ENST00000572351 IKQ13123 557 aaPredicted RBP11.04□□□□□ -0.64
NPLOC4-208ENST00000572351 SH3D19Q5HYK7 790 aa11.04□□□□□ -0.64
NPLOC4-208ENST00000572351 OTUD7BQ6GQQ9 843 aa11.04□□□□□ -0.64
NPLOC4-208ENST00000572351 NOL8Q76FK4 1167 aaKnown RBP11.04□□□□□ -0.64
NPLOC4-208ENST00000572351 MICU3Q86XE3 530 aa11.04□□□□□ -0.64
NPLOC4-208ENST00000572351 ZNF654Q8IZM8 581 aa11.04□□□□□ -0.64
NPLOC4-208ENST00000572351 PROCA1Q8NCQ7 364 aaPredicted RBP11.04□□□□□ -0.64
NPLOC4-208ENST00000572351 DCAF4Q8WV16 495 aa11.04□□□□□ -0.64
NPLOC4-208ENST00000572351 BRI3BPQ8WY22 251 aa11.04□□□□□ -0.64
NPLOC4-208ENST00000572351 MS4A4AQ96JQ5 239 aa11.04□□□□□ -0.64
NPLOC4-208ENST00000572351 C12orf42Q96LP6 360 aa11.04□□□□□ -0.64
NPLOC4-208ENST00000572351 KIF2CQ99661 725 aa11.04□□□□□ -0.64
NPLOC4-208ENST00000572351 RPAP3Q9H6T3 665 aaPredicted RBP11.04□□□□□ -0.64
NPLOC4-208ENST00000572351 SENP2Q9HC62 589 aa11.04□□□□□ -0.64
NPLOC4-208ENST00000572351 GOLGA8BA8MQT2 603 aa11.03□□□□□ -0.64
NPLOC4-208ENST00000572351 ZBTB43O43298 467 aa11.03□□□□□ -0.64
NPLOC4-208ENST00000572351 PARP1P09874 1014 aaKnown RBP11.03□□□□□ -0.64
NPLOC4-208ENST00000572351 CALM1P0DP23 149 aa11.03□□□□□ -0.64
NPLOC4-208ENST00000572351 CALM2P0DP24 149 aa11.03□□□□□ -0.64
NPLOC4-208ENST00000572351 CALM3P0DP25 149 aa11.03□□□□□ -0.64
NPLOC4-208ENST00000572351 BMP3P12645 472 aa11.03□□□□□ -0.64
NPLOC4-208ENST00000572351 OSBPP22059 807 aa11.03□□□□□ -0.64
NPLOC4-208ENST00000572351 KIF5BP33176 963 aa11.03□□□□□ -0.64
NPLOC4-208ENST00000572351 AK2P54819 239 aa11.03□□□□□ -0.64
NPLOC4-208ENST00000572351 APOBRQ0VD83 1088 aa11.03□□□□□ -0.64
NPLOC4-208ENST00000572351 FAM83BQ5T0W9 1011 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 160.4 ms