RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 MYCP01106 439 aaPredicted RBP12.2□□□□□ -0.46
GTF3C1-213ENST00000571886 GNRH1P01148 92 aa12.2□□□□□ -0.46
GTF3C1-213ENST00000571886 RGS19P49795 217 aa12.2□□□□□ -0.46
GTF3C1-213ENST00000571886 ALX1Q15699 326 aa12.2□□□□□ -0.46
GTF3C1-213ENST00000571886 ZNF444Q8N0Y2 327 aaPredicted RBP12.2□□□□□ -0.46
GTF3C1-213ENST00000571886 ARMC5Q96C12 935 aa12.2□□□□□ -0.46
GTF3C1-213ENST00000571886 PAGR1Q9BTK6 254 aa12.2□□□□□ -0.46
GTF3C1-213ENST00000571886 PORCNQ9H237 461 aa12.2□□□□□ -0.46
GTF3C1-213ENST00000571886 VCPKMTQ9H867 229 aa12.2□□□□□ -0.46
GTF3C1-213ENST00000571886 KANSL2Q9H9L4 492 aa12.2□□□□□ -0.46
GTF3C1-213ENST00000571886 BTBD7Q9P203 1132 aa12.2□□□□□ -0.46
GTF3C1-213ENST00000571886 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.2□□□□□ -0.46
GTF3C1-213ENST00000571886 PARP14Q460N5 1801 aa12.2□□□□□ -0.46
GTF3C1-213ENST00000571886 SPDYE16A6NNV3 312 aaPredicted RBP12.19□□□□□ -0.46
GTF3C1-213ENST00000571886 HOXD10P28358 340 aa12.19□□□□□ -0.46
GTF3C1-213ENST00000571886 FLT3LGP49771 235 aa12.19□□□□□ -0.46
GTF3C1-213ENST00000571886 HAND2P61296 217 aa12.19□□□□□ -0.46
GTF3C1-213ENST00000571886 ERVK-9P63128 1117 aa12.19□□□□□ -0.46
GTF3C1-213ENST00000571886 ERVK-24P63145 666 aa12.19□□□□□ -0.46
GTF3C1-213ENST00000571886 TFAP4Q01664 338 aa12.19□□□□□ -0.46
GTF3C1-213ENST00000571886 TICAM2Q86XR7 235 aa12.19□□□□□ -0.46
GTF3C1-213ENST00000571886 NEDD1Q8NHV4 660 aa12.19□□□□□ -0.46
GTF3C1-213ENST00000571886 CEP95Q96GE4 821 aa12.19□□□□□ -0.46
GTF3C1-213ENST00000571886 NBPF3Q9H094 633 aa12.19□□□□□ -0.46
GTF3C1-213ENST00000571886 ARHGEF10LQ9HCE6 1279 aa12.19□□□□□ -0.46
GTF3C1-213ENST00000571886 CLIP2Q9UDT6 1046 aa12.19□□□□□ -0.46
GTF3C1-213ENST00000571886 ANAPC4Q9UJX5 808 aa12.19□□□□□ -0.46
GTF3C1-213ENST00000571886 GJD2Q9UKL4 321 aa12.19□□□□□ -0.46
GTF3C1-213ENST00000571886 TNPO2O14787 897 aaKnown RBP12.18□□□□□ -0.46
GTF3C1-213ENST00000571886 NMT2O60551 498 aa12.18□□□□□ -0.46
GTF3C1-213ENST00000571886 PRMT2P55345 433 aa12.18□□□□□ -0.46
GTF3C1-213ENST00000571886 MTFR1Q15390 333 aa12.18□□□□□ -0.46
GTF3C1-213ENST00000571886 SLC9C1Q4G0N8 1177 aa12.18□□□□□ -0.46
GTF3C1-213ENST00000571886 GPRC5AQ8NFJ5 357 aa12.18□□□□□ -0.46
GTF3C1-213ENST00000571886 RAET1EQ8TD07 263 aa12.18□□□□□ -0.46
GTF3C1-213ENST00000571886 ZNF333Q96JL9 665 aa12.18□□□□□ -0.46
GTF3C1-213ENST00000571886 NUP88Q99567 741 aaPredicted RBP12.18□□□□□ -0.46
GTF3C1-213ENST00000571886 DIAPH3Q9NSV4 1193 aa12.18□□□□□ -0.46
GTF3C1-213ENST00000571886 FBXO28Q9NVF7 368 aa12.18□□□□□ -0.46
GTF3C1-213ENST00000571886 MTMR4Q9NYA4 1195 aa12.18□□□□□ -0.46
GTF3C1-213ENST00000571886 NYAP2Q9P242 653 aa12.18□□□□□ -0.46
GTF3C1-213ENST00000571886 COL11A1P12107 1806 aaPredicted RBP12.17□□□□□ -0.46
GTF3C1-213ENST00000571886 RAD21O60216 631 aa12.17□□□□□ -0.46
GTF3C1-213ENST00000571886 FGRP09769 529 aa12.17□□□□□ -0.46
GTF3C1-213ENST00000571886 ELNP15502 786 aa12.17□□□□□ -0.46
GTF3C1-213ENST00000571886 GRK4P32298 578 aa12.17□□□□□ -0.46
GTF3C1-213ENST00000571886 DSG3P32926 999 aa12.17□□□□□ -0.46
GTF3C1-213ENST00000571886 PDE4BQ07343 736 aa12.17□□□□□ -0.46
GTF3C1-213ENST00000571886 COG2Q14746 738 aa12.17□□□□□ -0.46
GTF3C1-213ENST00000571886 FAM83BQ5T0W9 1011 aa12.17□□□□□ -0.46
GTF3C1-213ENST00000571886 SAMD1Q6SPF0 538 aaPredicted RBP12.17□□□□□ -0.46
GTF3C1-213ENST00000571886 LBX2Q6XYB7 198 aa12.17□□□□□ -0.46
GTF3C1-213ENST00000571886 CHMP4CQ96CF2 233 aa12.17□□□□□ -0.46
GTF3C1-213ENST00000571886 TANGO6Q9C0B7 1094 aa12.17□□□□□ -0.46
GTF3C1-213ENST00000571886 IL17RBQ9NRM6 502 aa12.17□□□□□ -0.46
GTF3C1-213ENST00000571886 RABGAP1Q9Y3P9 1069 aa12.17□□□□□ -0.46
GTF3C1-213ENST00000571886 CENPFP49454 3210 aa12.17□□□□□ -0.46
GTF3C1-213ENST00000571886 KIAA0100Q14667 2235 aaKnown RBP12.17□□□□□ -0.46
GTF3C1-213ENST00000571886 F5H6K3 240 aa12.16□□□□□ -0.46
GTF3C1-213ENST00000571886 WDR46O15213 610 aaKnown RBP12.16□□□□□ -0.46
GTF3C1-213ENST00000571886 NDUFB10O96000 172 aa12.16□□□□□ -0.46
GTF3C1-213ENST00000571886 TSPY3P0CV98 308 aa12.16□□□□□ -0.46
GTF3C1-213ENST00000571886 TSPY8P0CW00 308 aa12.16□□□□□ -0.46
GTF3C1-213ENST00000571886 EN2P19622 333 aaPredicted RBP12.16□□□□□ -0.46
GTF3C1-213ENST00000571886 KLRC3Q07444 240 aa12.16□□□□□ -0.46
GTF3C1-213ENST00000571886 TBC1D10CQ8IV04 446 aa12.16□□□□□ -0.46
GTF3C1-213ENST00000571886 LRRC47Q8N1G4 583 aaKnown RBP12.16□□□□□ -0.46
GTF3C1-213ENST00000571886 LPAR1Q92633 364 aa12.16□□□□□ -0.46
GTF3C1-213ENST00000571886 MKL1Q969V6 931 aa12.16□□□□□ -0.46
GTF3C1-213ENST00000571886 COA7Q96BR5 231 aa12.16□□□□□ -0.46
GTF3C1-213ENST00000571886 ATG4CQ96DT6 458 aa12.16□□□□□ -0.46
GTF3C1-213ENST00000571886 PLIN4Q96Q06 1357 aa12.16□□□□□ -0.46
GTF3C1-213ENST00000571886 HIP1O00291 1037 aa12.15□□□□□ -0.46
GTF3C1-213ENST00000571886 ADCY3O60266 1144 aa12.15□□□□□ -0.46
GTF3C1-213ENST00000571886 RANBP6O60518 1105 aaKnown RBP12.15□□□□□ -0.46
GTF3C1-213ENST00000571886 FLOT1O75955 427 aa12.15□□□□□ -0.46
GTF3C1-213ENST00000571886 SLC3A2P08195 630 aaKnown RBP12.15□□□□□ -0.46
GTF3C1-213ENST00000571886 CYP2B6P20813 491 aa12.15□□□□□ -0.46
GTF3C1-213ENST00000571886 CHMLP26374 656 aa12.15□□□□□ -0.46
GTF3C1-213ENST00000571886 TRIM32Q13049 653 aa12.15□□□□□ -0.46
GTF3C1-213ENST00000571886 IRF5Q13568 498 aa12.15□□□□□ -0.46
GTF3C1-213ENST00000571886 RRP12Q5JTH9 1297 aaKnown RBP12.15□□□□□ -0.46
GTF3C1-213ENST00000571886 RASGRP2Q7LDG7 609 aa12.15□□□□□ -0.46
GTF3C1-213ENST00000571886 GPR142Q7Z601 462 aa12.15□□□□□ -0.46
GTF3C1-213ENST00000571886 NBPF11Q86T75 865 aa12.15□□□□□ -0.46
GTF3C1-213ENST00000571886 GTF3C2Q8WUA4 911 aaPredicted RBP12.15□□□□□ -0.46
GTF3C1-213ENST00000571886 SH2D4AQ9H788 454 aa12.15□□□□□ -0.46
GTF3C1-213ENST00000571886 ZNF287Q9HBT7 754 aa12.15□□□□□ -0.46
GTF3C1-213ENST00000571886 GOPCQ9HD26 462 aa12.15□□□□□ -0.46
GTF3C1-213ENST00000571886 HOXC10Q9NYD6 342 aa12.15□□□□□ -0.46
GTF3C1-213ENST00000571886 ADAMTS5Q9UNA0 930 aa12.15□□□□□ -0.46
GTF3C1-213ENST00000571886 ZNFX1Q9P2E3 1918 aaKnown RBP12.15□□□□□ -0.46
GTF3C1-213ENST00000571886 A0A0G2JMZ2 1700 aa12.14□□□□□ -0.47
GTF3C1-213ENST00000571886 ZMYM6O95789 1325 aa12.14□□□□□ -0.47
GTF3C1-213ENST00000571886 TSPY2A6NKD2 308 aa12.14□□□□□ -0.47
GTF3C1-213ENST00000571886 ORC4O43929 436 aa12.14□□□□□ -0.47
GTF3C1-213ENST00000571886 TTLL1O95922 423 aa12.14□□□□□ -0.47
GTF3C1-213ENST00000571886 PTH1RQ03431 593 aa12.14□□□□□ -0.47
GTF3C1-213ENST00000571886 TMEM132BQ14DG7 1078 aa12.14□□□□□ -0.47
GTF3C1-213ENST00000571886 MORN1Q5T089 497 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms