RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 STRBPQ96SI9 672 aaKnown RBP16.37■□□□□ 0.21
RPAIN-209ENST00000571558 DHX36Q9H2U1 1008 aaKnown RBP16.37■□□□□ 0.21
RPAIN-209ENST00000571558 LAMA2P24043 3122 aaKnown RBP16.37■□□□□ 0.21
RPAIN-209ENST00000571558 EIF5BO60841 1220 aaKnown RBP16.36■□□□□ 0.21
RPAIN-209ENST00000571558 REC8O95072 547 aa16.36■□□□□ 0.21
RPAIN-209ENST00000571558 MBD4O95243 580 aa16.36■□□□□ 0.21
RPAIN-209ENST00000571558 MFAP1P55081 439 aaKnown RBP16.36■□□□□ 0.21
RPAIN-209ENST00000571558 PPP4CP60510 307 aa16.36■□□□□ 0.21
RPAIN-209ENST00000571558 HERVK_113P62684 666 aa16.36■□□□□ 0.21
RPAIN-209ENST00000571558 PTH1RQ03431 593 aa16.36■□□□□ 0.21
RPAIN-209ENST00000571558 LRRC26Q2I0M4 334 aa16.36■□□□□ 0.21
RPAIN-209ENST00000571558 CCAR1Q8IX12 1150 aaKnown RBP16.36■□□□□ 0.21
RPAIN-209ENST00000571558 LCORLQ8N3X6 602 aa16.36■□□□□ 0.21
RPAIN-209ENST00000571558 MIGA1Q8NAN2 632 aa16.36■□□□□ 0.21
RPAIN-209ENST00000571558 GUCD1Q96NT3 240 aa16.36■□□□□ 0.21
RPAIN-209ENST00000571558 P2RX7Q99572 595 aaKnown RBP16.36■□□□□ 0.21
RPAIN-209ENST00000571558 USP26Q9BXU7 913 aa16.36■□□□□ 0.21
RPAIN-209ENST00000571558 PI4KBQ9UBF8 816 aa16.36■□□□□ 0.21
RPAIN-209ENST00000571558 MAGEB6P1A0A0J9YX57 407 aa16.36■□□□□ 0.21
RPAIN-209ENST00000571558 EPB41L2O43491 1005 aaKnown RBP16.36■□□□□ 0.21
RPAIN-209ENST00000571558 MSCO60682 206 aa16.36■□□□□ 0.21
RPAIN-209ENST00000571558 MDM2Q00987 491 aaPredicted RBP16.36■□□□□ 0.21
RPAIN-209ENST00000571558 VPS53Q5VIR6 699 aa16.36■□□□□ 0.21
RPAIN-209ENST00000571558 ARMT1Q9H993 441 aa16.36■□□□□ 0.21
RPAIN-209ENST00000571558 ANO2Q9NQ90 1003 aa16.36■□□□□ 0.21
RPAIN-209ENST00000571558 FAM196BA6NMK8 535 aa16.35■□□□□ 0.21
RPAIN-209ENST00000571558 DYNLL1P63167 89 aaKnown RBP16.35■□□□□ 0.21
RPAIN-209ENST00000571558 MTMR2Q13614 643 aa16.35■□□□□ 0.21
RPAIN-209ENST00000571558 MORN1Q5T089 497 aa16.35■□□□□ 0.21
RPAIN-209ENST00000571558 ZNF697Q5TEC3 545 aa16.35■□□□□ 0.21
RPAIN-209ENST00000571558 MAP4K1Q92918 833 aa16.35■□□□□ 0.21
RPAIN-209ENST00000571558 APBA2Q99767 749 aa16.35■□□□□ 0.21
RPAIN-209ENST00000571558 RBPJLQ9UBG7 517 aa16.35■□□□□ 0.21
RPAIN-209ENST00000571558 PLXNB2O15031 1838 aa16.34■□□□□ 0.21
RPAIN-209ENST00000571558 HSPD1P10809 573 aaKnown RBP16.34■□□□□ 0.21
RPAIN-209ENST00000571558 FOXP4Q8IVH2 680 aaPredicted RBP16.34■□□□□ 0.21
RPAIN-209ENST00000571558 DSCC1Q9BVC3 393 aa16.34■□□□□ 0.21
RPAIN-209ENST00000571558 RNF216Q9NWF9 866 aaPredicted RBP16.34■□□□□ 0.21
RPAIN-209ENST00000571558 AATFQ9NY61 560 aaKnown RBP eCLIP16.34■□□□□ 0.21
RPAIN-209ENST00000571558 PRKAG2Q9UGJ0 569 aa16.34■□□□□ 0.21
RPAIN-209ENST00000571558 DNAH12Q6ZR08 3092 aa16.33■□□□□ 0.21
RPAIN-209ENST00000571558 GSG1L2A8MUP6 293 aa16.33■□□□□ 0.2
RPAIN-209ENST00000571558 USP17L10C9JJH3 530 aa16.33■□□□□ 0.2
RPAIN-209ENST00000571558 ERVK-9P63128 1117 aa16.33■□□□□ 0.2
RPAIN-209ENST00000571558 ERVK-24P63145 666 aa16.33■□□□□ 0.2
RPAIN-209ENST00000571558 KIAA1211Q6ZU35 1233 aa16.33■□□□□ 0.2
RPAIN-209ENST00000571558 GPR142Q7Z601 462 aa16.33■□□□□ 0.2
RPAIN-209ENST00000571558 PLEKHH3Q7Z736 793 aa16.33■□□□□ 0.2
RPAIN-209ENST00000571558 METTL16Q86W50 562 aaKnown RBP16.33■□□□□ 0.2
RPAIN-209ENST00000571558 TXNRD2Q9NNW7 524 aa16.33■□□□□ 0.2
RPAIN-209ENST00000571558 VCANP13611 3396 aa16.33■□□□□ 0.2
RPAIN-209ENST00000571558 PRKAB2O43741 272 aa16.32■□□□□ 0.2
RPAIN-209ENST00000571558 BAG3O95817 575 aa16.32■□□□□ 0.2
RPAIN-209ENST00000571558 PLCG2P16885 1265 aa16.32■□□□□ 0.2
RPAIN-209ENST00000571558 GNAT2P19087 354 aa16.32■□□□□ 0.2
RPAIN-209ENST00000571558 CCND3P30281 292 aaPredicted RBP16.32■□□□□ 0.2
RPAIN-209ENST00000571558 CCNA1P78396 465 aa16.32■□□□□ 0.2
RPAIN-209ENST00000571558 RRP1BQ14684 758 aaKnown RBP16.32■□□□□ 0.2
RPAIN-209ENST00000571558 MFSD14CQ5VZR4 134 aa16.32■□□□□ 0.2
RPAIN-209ENST00000571558 CERS3Q8IU89 383 aa16.32■□□□□ 0.2
RPAIN-209ENST00000571558 SH3RF3Q8TEJ3 882 aaPredicted RBP16.32■□□□□ 0.2
RPAIN-209ENST00000571558 NOL10Q9BSC4 688 aaKnown RBP16.32■□□□□ 0.2
RPAIN-209ENST00000571558 EPB41L4AQ9HCS5 686 aaPredicted RBP16.32■□□□□ 0.2
RPAIN-209ENST00000571558 PATL2C9JE40 543 aaKnown RBP16.31■□□□□ 0.2
RPAIN-209ENST00000571558 MAP2K5Q13163 448 aa16.31■□□□□ 0.2
RPAIN-209ENST00000571558 ALX1Q15699 326 aa16.31■□□□□ 0.2
RPAIN-209ENST00000571558 TEX11Q8IYF3 940 aa16.31■□□□□ 0.2
RPAIN-209ENST00000571558 LPAR1Q92633 364 aa16.31■□□□□ 0.2
RPAIN-209ENST00000571558 TBC1D32Q96NH3 1257 aa16.31■□□□□ 0.2
RPAIN-209ENST00000571558 SENP6Q9GZR1 1112 aaPredicted RBP16.31■□□□□ 0.2
RPAIN-209ENST00000571558 RABGAP1Q9Y3P9 1069 aa16.31■□□□□ 0.2
RPAIN-209ENST00000571558 DNM1LO00429 736 aa16.3■□□□□ 0.2
RPAIN-209ENST00000571558 HOXD11P31277 338 aaPredicted RBP16.3■□□□□ 0.2
RPAIN-209ENST00000571558 RBM25P49756 843 aaKnown RBP16.3■□□□□ 0.2
RPAIN-209ENST00000571558 NECTIN1Q15223 517 aa16.3■□□□□ 0.2
RPAIN-209ENST00000571558 Q3C1V9 767 aa16.3■□□□□ 0.2
RPAIN-209ENST00000571558 SYMPKQ92797 1274 aaKnown RBP16.3■□□□□ 0.2
RPAIN-209ENST00000571558 CRNKL1Q9BZJ0 848 aaKnown RBP16.3■□□□□ 0.2
RPAIN-209ENST00000571558 PORCNQ9H237 461 aa16.3■□□□□ 0.2
RPAIN-209ENST00000571558 CWC22Q9HCG8 908 aaKnown RBP16.3■□□□□ 0.2
RPAIN-209ENST00000571558 RBM8AQ9Y5S9 174 aaKnown RBP16.3■□□□□ 0.2
RPAIN-209ENST00000571558 SLC4A4Q9Y6R1 1079 aa16.3■□□□□ 0.2
RPAIN-209ENST00000571558 ZMYM6O95789 1325 aa16.3■□□□□ 0.2
RPAIN-209ENST00000571558 ATAD5Q96QE3 1844 aa16.3■□□□□ 0.2
RPAIN-209ENST00000571558 HOXC6P09630 235 aa16.29■□□□□ 0.2
RPAIN-209ENST00000571558 HSPA4P34932 840 aa16.29■□□□□ 0.2
RPAIN-209ENST00000571558 CCL14Q16627 93 aa16.29■□□□□ 0.2
RPAIN-209ENST00000571558 SDR42E1Q8WUS8 393 aa16.29■□□□□ 0.2
RPAIN-209ENST00000571558 KCNB2Q92953 911 aa16.29■□□□□ 0.2
RPAIN-209ENST00000571558 CDX2Q99626 313 aaPredicted RBP16.29■□□□□ 0.2
RPAIN-209ENST00000571558 C22orf23Q9BZE7 217 aa16.29■□□□□ 0.2
RPAIN-209ENST00000571558 UPF2Q9HAU5 1272 aaKnown RBP16.29■□□□□ 0.2
RPAIN-209ENST00000571558 PRDM6Q9NQX0 595 aa16.29■□□□□ 0.2
RPAIN-209ENST00000571558 DDX20Q9UHI6 824 aaKnown RBP16.29■□□□□ 0.2
RPAIN-209ENST00000571558 U3KPZ7 1027 aaPredicted RBP16.29■□□□□ 0.2
RPAIN-209ENST00000571558 SLC15A5A6NIM6 579 aa16.28■□□□□ 0.2
RPAIN-209ENST00000571558 FGAP02671 866 aa16.28■□□□□ 0.2
RPAIN-209ENST00000571558 GIMAP6Q6P9H5 292 aa16.28■□□□□ 0.2
RPAIN-209ENST00000571558 USP17L2Q6R6M4 530 aa16.28■□□□□ 0.2
RPAIN-209ENST00000571558 IFNL3Q8IZI9 196 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms