RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 WDR63Q8IWG1 891 aa8.95□□□□□ -0.98
SMG6-205ENST00000570659 AS3MTQ9HBK9 375 aa8.95□□□□□ -0.98
SMG6-205ENST00000570659 HERC5Q9UII4 1024 aaKnown RBP8.95□□□□□ -0.98
SMG6-205ENST00000570659 PDS5AQ29RF7 1337 aaKnown RBP8.95□□□□□ -0.98
SMG6-205ENST00000570659 WDFY4Q6ZS81 3184 aa8.95□□□□□ -0.98
SMG6-205ENST00000570659 C19orf81C9J6K1 198 aa8.94□□□□□ -0.98
SMG6-205ENST00000570659 KBTBD13C9JR72 458 aa8.94□□□□□ -0.98
SMG6-205ENST00000570659 ADAMTS4O75173 837 aa8.94□□□□□ -0.98
SMG6-205ENST00000570659 PGK2P07205 417 aa8.94□□□□□ -0.98
SMG6-205ENST00000570659 ASNSP08243 561 aa8.94□□□□□ -0.98
SMG6-205ENST00000570659 RAG1P15918 1043 aa8.94□□□□□ -0.98
SMG6-205ENST00000570659 ERCC3P19447 782 aa8.94□□□□□ -0.98
SMG6-205ENST00000570659 IGFBP4P22692 258 aa8.94□□□□□ -0.98
SMG6-205ENST00000570659 OLFML2BQ68BL8 750 aa8.94□□□□□ -0.98
SMG6-205ENST00000570659 CCSAPQ6IQ19 270 aaPredicted RBP8.94□□□□□ -0.98
SMG6-205ENST00000570659 USP17L2Q6R6M4 530 aa8.94□□□□□ -0.98
SMG6-205ENST00000570659 ZNF365Q70YC5 407 aa8.94□□□□□ -0.98
SMG6-205ENST00000570659 SPATA5Q8NB90 893 aa8.94□□□□□ -0.98
SMG6-205ENST00000570659 RPAP3Q9H6T3 665 aaPredicted RBP8.94□□□□□ -0.98
SMG6-205ENST00000570659 GNL3LQ9NVN8 582 aaKnown RBP8.94□□□□□ -0.98
SMG6-205ENST00000570659 USP17L15C9J2P7 530 aa8.93□□□□□ -0.98
SMG6-205ENST00000570659 USP17L13C9JLJ4 530 aa8.93□□□□□ -0.98
SMG6-205ENST00000570659 USP17L11C9JVI0 530 aa8.93□□□□□ -0.98
SMG6-205ENST00000570659 USP17L18D6R9N7 530 aa8.93□□□□□ -0.98
SMG6-205ENST00000570659 USP17L22D6RA61 530 aa8.93□□□□□ -0.98
SMG6-205ENST00000570659 USP17L17D6RBQ6 530 aa8.93□□□□□ -0.98
SMG6-205ENST00000570659 USP17L19D6RCP7 530 aa8.93□□□□□ -0.98
SMG6-205ENST00000570659 USP17L20D6RJB6 530 aa8.93□□□□□ -0.98
SMG6-205ENST00000570659 ZNF865P0CJ78 1059 aaPredicted RBP8.93□□□□□ -0.98
SMG6-205ENST00000570659 SHMT1P34896 483 aa8.93□□□□□ -0.98
SMG6-205ENST00000570659 USP17L24Q0WX57 530 aa8.93□□□□□ -0.98
SMG6-205ENST00000570659 LBX2Q6XYB7 198 aa8.93□□□□□ -0.98
SMG6-205ENST00000570659 SIAH1Q8IUQ4 282 aa8.93□□□□□ -0.98
SMG6-205ENST00000570659 MICALL1Q8N3F8 863 aa8.93□□□□□ -0.98
SMG6-205ENST00000570659 ARRDC4Q8NCT1 418 aa8.93□□□□□ -0.98
SMG6-205ENST00000570659 MAML3Q96JK9 1138 aa8.93□□□□□ -0.98
SMG6-205ENST00000570659 MEIS3Q99687 375 aa8.93□□□□□ -0.98
SMG6-205ENST00000570659 TBC1D2Q9BYX2 928 aa8.93□□□□□ -0.98
SMG6-205ENST00000570659 COPRSQ9NQ92 184 aa8.93□□□□□ -0.98
SMG6-205ENST00000570659 PIH1D3Q9NQM4 214 aaKnown RBP8.93□□□□□ -0.98
SMG6-205ENST00000570659 TMEM39AQ9NV64 488 aa8.93□□□□□ -0.98
SMG6-205ENST00000570659 RAI14Q9P0K7 980 aa8.93□□□□□ -0.98
SMG6-205ENST00000570659 PI4KBQ9UBF8 816 aa8.93□□□□□ -0.98
SMG6-205ENST00000570659 TNNQ9UQP3 1299 aa8.93□□□□□ -0.98
SMG6-205ENST00000570659 TACC3Q9Y6A5 838 aa8.93□□□□□ -0.98
SMG6-205ENST00000570659 ZNF521Q96K83 1311 aa8.93□□□□□ -0.98
SMG6-205ENST00000570659 MCM3APO60318 1980 aa8.93□□□□□ -0.98
SMG6-205ENST00000570659 BRWD1Q9NSI6 2320 aa8.93□□□□□ -0.98
SMG6-205ENST00000570659 PTPRSQ13332 1948 aa8.92□□□□□ -0.98
SMG6-205ENST00000570659 COL4A4P53420 1690 aaPredicted RBP8.92□□□□□ -0.98
SMG6-205ENST00000570659 CTAGE5O15320 804 aa8.92□□□□□ -0.98
SMG6-205ENST00000570659 MSCO60682 206 aa8.92□□□□□ -0.98
SMG6-205ENST00000570659 ARID4AP29374 1257 aaPredicted RBP8.92□□□□□ -0.98
SMG6-205ENST00000570659 CYP2C18P33260 490 aa8.92□□□□□ -0.98
SMG6-205ENST00000570659 IL15P40933 162 aaPredicted RBP8.92□□□□□ -0.98
SMG6-205ENST00000570659 TATDN1Q6P1N9 297 aa8.92□□□□□ -0.98
SMG6-205ENST00000570659 ANKRD33Q7Z3H0 272 aa8.92□□□□□ -0.98
SMG6-205ENST00000570659 CCAR1Q8IX12 1150 aaKnown RBP8.92□□□□□ -0.98
SMG6-205ENST00000570659 ATG4CQ96DT6 458 aa8.92□□□□□ -0.98
SMG6-205ENST00000570659 PPP1R12CQ9BZL4 782 aa8.92□□□□□ -0.98
SMG6-205ENST00000570659 SPATC1LQ9H0A9 340 aa8.92□□□□□ -0.98
SMG6-205ENST00000570659 XPNPEP3Q9NQH7 507 aa8.92□□□□□ -0.98
SMG6-205ENST00000570659 DDX49Q9Y6V7 483 aaKnown RBP8.92□□□□□ -0.98
SMG6-205ENST00000570659 SCN5AQ14524 2016 aa8.92□□□□□ -0.98
SMG6-205ENST00000570659 SYNRGQ9UMZ2 1314 aa8.91□□□□□ -0.98
SMG6-205ENST00000570659 TLL1O43897 1013 aa8.91□□□□□ -0.98
SMG6-205ENST00000570659 TIMP1P01033 207 aa8.91□□□□□ -0.98
SMG6-205ENST00000570659 CYP2E1P05181 493 aaPredicted RBP8.91□□□□□ -0.98
SMG6-205ENST00000570659 PLCD1P51178 756 aa8.91□□□□□ -0.98
SMG6-205ENST00000570659 ACLYP53396 1101 aa8.91□□□□□ -0.98
SMG6-205ENST00000570659 SEPT2Q15019 361 aa8.91□□□□□ -0.98
SMG6-205ENST00000570659 RAB3GAP1Q15042 981 aa8.91□□□□□ -0.98
SMG6-205ENST00000570659 CCDC129Q6ZRS4 1044 aa8.91□□□□□ -0.98
SMG6-205ENST00000570659 DPP9Q86TI2 863 aa8.91□□□□□ -0.98
SMG6-205ENST00000570659 ZGPATQ8N5A5 531 aaKnown RBP8.91□□□□□ -0.98
SMG6-205ENST00000570659 SLC44A5Q8NCS7 719 aa8.91□□□□□ -0.98
SMG6-205ENST00000570659 KLHDC9Q8NEP7 349 aa8.91□□□□□ -0.98
SMG6-205ENST00000570659 PHOX2BQ99453 314 aa8.91□□□□□ -0.98
SMG6-205ENST00000570659 GAS2L1Q99501 681 aaPredicted RBP8.91□□□□□ -0.98
SMG6-205ENST00000570659 KIAA1683Q9H0B3 1180 aa8.91□□□□□ -0.98
SMG6-205ENST00000570659 CERS4Q9HA82 394 aa8.91□□□□□ -0.98
SMG6-205ENST00000570659 CWC22Q9HCG8 908 aaKnown RBP8.91□□□□□ -0.98
SMG6-205ENST00000570659 CYP2D6P10635 497 aa8.9□□□□□ -0.98
SMG6-205ENST00000570659 CDK7P50613 346 aa8.9□□□□□ -0.98
SMG6-205ENST00000570659 PPP4CP60510 307 aa8.9□□□□□ -0.98
SMG6-205ENST00000570659 TMEM63BQ5T3F8 832 aa8.9□□□□□ -0.98
SMG6-205ENST00000570659 SPTY2D1Q68D10 685 aaPredicted RBP8.9□□□□□ -0.98
SMG6-205ENST00000570659 MFSD5Q6N075 450 aa8.9□□□□□ -0.98
SMG6-205ENST00000570659 FOXP4Q8IVH2 680 aaPredicted RBP8.9□□□□□ -0.98
SMG6-205ENST00000570659 CRACR2BQ8N4Y2 399 aaPredicted RBP8.9□□□□□ -0.98
SMG6-205ENST00000570659 MIGA1Q8NAN2 632 aa8.9□□□□□ -0.98
SMG6-205ENST00000570659 SNX27Q96L92 541 aa8.9□□□□□ -0.98
SMG6-205ENST00000570659 FGD4Q96M96 766 aa8.9□□□□□ -0.98
SMG6-205ENST00000570659 NEUROD6Q96NK8 337 aa8.9□□□□□ -0.98
SMG6-205ENST00000570659 FEZ1Q99689 392 aa8.9□□□□□ -0.98
SMG6-205ENST00000570659 FBXO28Q9NVF7 368 aa8.9□□□□□ -0.98
SMG6-205ENST00000570659 TLR7Q9NYK1 1049 aaKnown RBP8.9□□□□□ -0.98
SMG6-205ENST00000570659 GRIN2DO15399 1336 aa8.89□□□□□ -0.99
SMG6-205ENST00000570659 SNAI1O95863 264 aaPredicted RBP8.89□□□□□ -0.99
SMG6-205ENST00000570659 CCNA1P78396 465 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms