RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 IVNS1ABPQ9Y6Y0 642 aa10.41□□□□□ -0.74
CTDNEP1-203ENST00000570385 NAV1Q8NEY1 1877 aa10.4□□□□□ -0.74
CTDNEP1-203ENST00000570385 LAMA3Q16787 3333 aa10.4□□□□□ -0.74
CTDNEP1-203ENST00000570385 SLC15A5A6NIM6 579 aa10.4□□□□□ -0.74
CTDNEP1-203ENST00000570385 MS4A1P11836 297 aa10.4□□□□□ -0.74
CTDNEP1-203ENST00000570385 AKR1B1P15121 316 aa10.4□□□□□ -0.74
CTDNEP1-203ENST00000570385 ADD2P35612 726 aa10.4□□□□□ -0.74
CTDNEP1-203ENST00000570385 PLS1Q14651 629 aa10.4□□□□□ -0.74
CTDNEP1-203ENST00000570385 COG2Q14746 738 aa10.4□□□□□ -0.74
CTDNEP1-203ENST00000570385 LRRC26Q2I0M4 334 aa10.4□□□□□ -0.74
CTDNEP1-203ENST00000570385 ANO1Q5XXA6 986 aa10.4□□□□□ -0.74
CTDNEP1-203ENST00000570385 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.4□□□□□ -0.74
CTDNEP1-203ENST00000570385 MOV10L1Q9BXT6 1211 aaKnown RBP10.4□□□□□ -0.74
CTDNEP1-203ENST00000570385 DDX19BQ9UMR2 479 aa10.4□□□□□ -0.74
CTDNEP1-203ENST00000570385 BAZ2AQ9UIF9 1905 aaKnown RBP10.39□□□□□ -0.75
CTDNEP1-203ENST00000570385 A0A1W2PPC1 479 aa10.39□□□□□ -0.75
CTDNEP1-203ENST00000570385 USP17L12C9JPN9 530 aa10.39□□□□□ -0.75
CTDNEP1-203ENST00000570385 USP17L21D6R901 530 aa10.39□□□□□ -0.75
CTDNEP1-203ENST00000570385 RAB11FIP3O75154 756 aa10.39□□□□□ -0.75
CTDNEP1-203ENST00000570385 MYCNP04198 464 aaPredicted RBP10.39□□□□□ -0.75
CTDNEP1-203ENST00000570385 COL6A1P12109 1028 aa10.39□□□□□ -0.75
CTDNEP1-203ENST00000570385 ATN1P54259 1190 aaPredicted RBP10.39□□□□□ -0.75
CTDNEP1-203ENST00000570385 MDM2Q00987 491 aaPredicted RBP10.39□□□□□ -0.75
CTDNEP1-203ENST00000570385 GRB14Q14449 540 aa10.39□□□□□ -0.75
CTDNEP1-203ENST00000570385 C20orf194Q5TEA3 1177 aa10.39□□□□□ -0.75
CTDNEP1-203ENST00000570385 TMED8Q6PL24 325 aaPredicted RBP10.39□□□□□ -0.75
CTDNEP1-203ENST00000570385 LBX2Q6XYB7 198 aa10.39□□□□□ -0.75
CTDNEP1-203ENST00000570385 TMEM179Q6ZVK1 233 aa10.39□□□□□ -0.75
CTDNEP1-203ENST00000570385 DPP9Q86TI2 863 aa10.39□□□□□ -0.75
CTDNEP1-203ENST00000570385 SIAH1Q8IUQ4 282 aa10.39□□□□□ -0.75
CTDNEP1-203ENST00000570385 STK11IPQ8N1F8 1099 aa10.39□□□□□ -0.75
CTDNEP1-203ENST00000570385 TRPV1Q8NER1 839 aa10.39□□□□□ -0.75
CTDNEP1-203ENST00000570385 UBE2OQ9C0C9 1292 aaKnown RBP10.39□□□□□ -0.75
CTDNEP1-203ENST00000570385 SENP6Q9GZR1 1112 aaPredicted RBP10.39□□□□□ -0.75
CTDNEP1-203ENST00000570385 HOXC10Q9NYD6 342 aa10.39□□□□□ -0.75
CTDNEP1-203ENST00000570385 RAD21O60216 631 aa10.38□□□□□ -0.75
CTDNEP1-203ENST00000570385 FLOT1O75955 427 aa10.38□□□□□ -0.75
CTDNEP1-203ENST00000570385 ATP5JP18859 108 aa10.38□□□□□ -0.75
CTDNEP1-203ENST00000570385 ERCC3P19447 782 aa10.38□□□□□ -0.75
CTDNEP1-203ENST00000570385 ADORA2AP29274 412 aa10.38□□□□□ -0.75
CTDNEP1-203ENST00000570385 CDK8P49336 464 aa10.38□□□□□ -0.75
CTDNEP1-203ENST00000570385 ICA1Q05084 483 aa10.38□□□□□ -0.75
CTDNEP1-203ENST00000570385 PRAMEF19Q5SWL8 479 aa10.38□□□□□ -0.75
CTDNEP1-203ENST00000570385 Q7L0L9 218 aa10.38□□□□□ -0.75
CTDNEP1-203ENST00000570385 NCAPG2Q86XI2 1143 aa10.38□□□□□ -0.75
CTDNEP1-203ENST00000570385 ATG4CQ96DT6 458 aa10.38□□□□□ -0.75
CTDNEP1-203ENST00000570385 HAUS7Q99871 368 aa10.38□□□□□ -0.75
CTDNEP1-203ENST00000570385 SPATC1LQ9H0A9 340 aa10.38□□□□□ -0.75
CTDNEP1-203ENST00000570385 SWAP70Q9UH65 585 aa10.38□□□□□ -0.75
CTDNEP1-203ENST00000570385 DDX20Q9UHI6 824 aaKnown RBP10.38□□□□□ -0.75
CTDNEP1-203ENST00000570385 RCAN3Q9UKA8 241 aa10.38□□□□□ -0.75
CTDNEP1-203ENST00000570385 SLC4A4Q9Y6R1 1079 aa10.38□□□□□ -0.75
CTDNEP1-203ENST00000570385 COBLO75128 1261 aa10.37□□□□□ -0.75
CTDNEP1-203ENST00000570385 HOXC6P09630 235 aa10.37□□□□□ -0.75
CTDNEP1-203ENST00000570385 DSG3P32926 999 aa10.37□□□□□ -0.75
CTDNEP1-203ENST00000570385 BMP8BP34820 402 aa10.37□□□□□ -0.75
CTDNEP1-203ENST00000570385 GJC2Q5T442 439 aaPredicted RBP10.37□□□□□ -0.75
CTDNEP1-203ENST00000570385 C12orf60Q5U649 245 aa10.37□□□□□ -0.75
CTDNEP1-203ENST00000570385 TSHZ3Q63HK5 1081 aa10.37□□□□□ -0.75
CTDNEP1-203ENST00000570385 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.37□□□□□ -0.754e-6■□□□□ 11.1
CTDNEP1-203ENST00000570385 PUS7LQ9H0K6 701 aaKnown RBP10.37□□□□□ -0.75
CTDNEP1-203ENST00000570385 ARHGEF10LQ9HCE6 1279 aa10.37□□□□□ -0.75
CTDNEP1-203ENST00000570385 FBXO28Q9NVF7 368 aa10.37□□□□□ -0.75
CTDNEP1-203ENST00000570385 CYBAP13498 195 aa10.36□□□□□ -0.75
CTDNEP1-203ENST00000570385 EEF2P13639 858 aaKnown RBP10.36□□□□□ -0.75
CTDNEP1-203ENST00000570385 CTR9Q6PD62 1173 aa10.36□□□□□ -0.75
CTDNEP1-203ENST00000570385 AMOTL1Q8IY63 956 aa10.36□□□□□ -0.75
CTDNEP1-203ENST00000570385 TDHQ8IZJ6 230 aa10.36□□□□□ -0.75
CTDNEP1-203ENST00000570385 LPAR1Q92633 364 aa10.36□□□□□ -0.75
CTDNEP1-203ENST00000570385 LRRCC1Q9C099 1032 aa10.36□□□□□ -0.75
CTDNEP1-203ENST00000570385 VCPKMTQ9H867 229 aa10.36□□□□□ -0.75
CTDNEP1-203ENST00000570385 ATP8A2Q9NTI2 1148 aa10.36□□□□□ -0.75
CTDNEP1-203ENST00000570385 TMX2Q9Y320 296 aa10.36□□□□□ -0.75
CTDNEP1-203ENST00000570385 MYH8P13535 1937 aa10.36□□□□□ -0.75
CTDNEP1-203ENST00000570385 RLFQ13129 1914 aa10.35□□□□□ -0.75
CTDNEP1-203ENST00000570385 SMCHD1A6NHR9 2005 aa10.35□□□□□ -0.75
CTDNEP1-203ENST00000570385 TMEM132BQ14DG7 1078 aa10.35□□□□□ -0.75
CTDNEP1-203ENST00000570385 UBE3CQ15386 1083 aa10.35□□□□□ -0.75
CTDNEP1-203ENST00000570385 C16orf86Q6ZW13 317 aa10.35□□□□□ -0.75
CTDNEP1-203ENST00000570385 DEFB123Q8N688 67 aa10.35□□□□□ -0.75
CTDNEP1-203ENST00000570385 SLC17A8Q8NDX2 589 aa10.35□□□□□ -0.75
CTDNEP1-203ENST00000570385 DDRGK1Q96HY6 314 aa10.35□□□□□ -0.75
CTDNEP1-203ENST00000570385 NUP88Q99567 741 aaPredicted RBP10.35□□□□□ -0.75
CTDNEP1-203ENST00000570385 MINDY4BA8MYZ0 360 aa10.34□□□□□ -0.75
CTDNEP1-203ENST00000570385 DNM1LO00429 736 aa10.34□□□□□ -0.75
CTDNEP1-203ENST00000570385 STRNO43815 780 aa10.34□□□□□ -0.75
CTDNEP1-203ENST00000570385 MSCO60682 206 aa10.34□□□□□ -0.75
CTDNEP1-203ENST00000570385 IGHA2P01877 340 aa10.34□□□□□ -0.75
CTDNEP1-203ENST00000570385 PGK2P07205 417 aa10.34□□□□□ -0.75
CTDNEP1-203ENST00000570385 FCER1AP12319 257 aa10.34□□□□□ -0.75
CTDNEP1-203ENST00000570385 SLC4A3P48751 1232 aa10.34□□□□□ -0.75
CTDNEP1-203ENST00000570385 RTP1P59025 263 aa10.34□□□□□ -0.75
CTDNEP1-203ENST00000570385 FAM83BQ5T0W9 1011 aa10.34□□□□□ -0.75
CTDNEP1-203ENST00000570385 OLFML2BQ68BL8 750 aa10.34□□□□□ -0.75
CTDNEP1-203ENST00000570385 MB21D1Q8N884 522 aa10.34□□□□□ -0.75
CTDNEP1-203ENST00000570385 SHCBP1Q8NEM2 672 aa10.34□□□□□ -0.75
CTDNEP1-203ENST00000570385 FERMT2Q96AC1 680 aa10.34□□□□□ -0.75
CTDNEP1-203ENST00000570385 CCDC17Q96LX7 622 aa10.34□□□□□ -0.75
CTDNEP1-203ENST00000570385 LBHD1Q9BQE6 289 aaPredicted RBP10.34□□□□□ -0.75
CTDNEP1-203ENST00000570385 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms