RNA–Protein interactions for RNA: ENST00000570308.5

MMP2-208, Transcript of matrix metallopeptidase 2, humanhuman

TSL 1 (best) BASIC

Gene MMP2, Length 3,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2-208ENST00000570308 SPAG5Q96R06 1193 aa11.72□□□□□ -0.53
MMP2-208ENST00000570308 CDC5LQ99459 802 aaKnown RBP11.72□□□□□ -0.53
MMP2-208ENST00000570308 LLPHQ9BRT6 129 aaKnown RBP11.72□□□□□ -0.53
MMP2-208ENST00000570308 BUB1BO60566 1050 aaPredicted RBP11.72□□□□□ -0.53
MMP2-208ENST00000570308 CCDC70Q6NSX1 233 aa11.72□□□□□ -0.53
MMP2-208ENST00000570308 RIC3Q7Z5B4 369 aa11.72□□□□□ -0.53
MMP2-208ENST00000570308 PPFIBP1Q86W92 1011 aa11.72□□□□□ -0.53
MMP2-208ENST00000570308 ZNF473Q8WTR7 871 aaKnown RBP11.72□□□□□ -0.53
MMP2-208ENST00000570308 CCDC47Q96A33 483 aaKnown RBP11.72□□□□□ -0.53
MMP2-208ENST00000570308 RTEL1Q9NZ71 1219 aa11.72□□□□□ -0.53
MMP2-208ENST00000570308 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.72□□□□□ -0.53
MMP2-208ENST00000570308 RIPOR2Q9Y4F9 1068 aa11.72□□□□□ -0.53
MMP2-208ENST00000570308 SLIT2O94813 1529 aa11.71□□□□□ -0.53
MMP2-208ENST00000570308 HIP1O00291 1037 aa11.71□□□□□ -0.53
MMP2-208ENST00000570308 SETSIPP0DME0 302 aa11.71□□□□□ -0.53
MMP2-208ENST00000570308 ATP5JP18859 108 aa11.71□□□□□ -0.53
MMP2-208ENST00000570308 RFX5P48382 616 aaPredicted RBP11.71□□□□□ -0.53
MMP2-208ENST00000570308 TRIM28Q13263 835 aaKnown RBP11.71□□□□□ -0.53
MMP2-208ENST00000570308 NUP133Q8WUM0 1156 aa11.71□□□□□ -0.53
MMP2-208ENST00000570308 CHCHD3Q9NX63 227 aaKnown RBP11.71□□□□□ -0.53
MMP2-208ENST00000570308 H7C1W4 665 aa11.71□□□□□ -0.53
MMP2-208ENST00000570308 CWF19L2Q2TBE0 894 aaKnown RBP11.71□□□□□ -0.53
MMP2-208ENST00000570308 TBC1D25Q3MII6 688 aa11.71□□□□□ -0.53
MMP2-208ENST00000570308 RAD9BQ6WBX8 426 aa11.71□□□□□ -0.53
MMP2-208ENST00000570308 CCNI2Q6ZMN8 369 aaPredicted RBP11.71□□□□□ -0.53
MMP2-208ENST00000570308 NFXL1Q6ZNB6 911 aa11.71□□□□□ -0.53
MMP2-208ENST00000570308 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.71□□□□□ -0.53
MMP2-208ENST00000570308 RASGRP2Q7LDG7 609 aa11.71□□□□□ -0.53
MMP2-208ENST00000570308 GPATCH3Q96I76 525 aa11.71□□□□□ -0.53
MMP2-208ENST00000570308 RPGRIP1Q96KN7 1286 aa11.71□□□□□ -0.53
MMP2-208ENST00000570308 HMG20BQ9P0W2 317 aa11.71□□□□□ -0.53
MMP2-208ENST00000570308 JCADQ9P266 1359 aa11.71□□□□□ -0.54
MMP2-208ENST00000570308 NBPF26B4DH59 902 aa11.71□□□□□ -0.54
MMP2-208ENST00000570308 ZMYND10O75800 440 aa11.71□□□□□ -0.54
MMP2-208ENST00000570308 LSP1P33241 339 aa11.71□□□□□ -0.54
MMP2-208ENST00000570308 COL9A3Q14050 684 aaPredicted RBP11.71□□□□□ -0.54
MMP2-208ENST00000570308 KRT32Q14532 448 aa11.71□□□□□ -0.54
MMP2-208ENST00000570308 HSP90AA4PQ58FG1 418 aa11.71□□□□□ -0.54
MMP2-208ENST00000570308 SPECC1Q5M775 1068 aa11.71□□□□□ -0.54
MMP2-208ENST00000570308 NBPF14Q5TI25 921 aa11.71□□□□□ -0.54
MMP2-208ENST00000570308 NBPF15Q8N660 670 aa11.71□□□□□ -0.54
MMP2-208ENST00000570308 FAM184BQ9ULE4 1060 aa11.71□□□□□ -0.54
MMP2-208ENST00000570308 TRPC6Q9Y210 931 aa11.71□□□□□ -0.54
MMP2-208ENST00000570308 PDE6BP35913 854 aa11.7□□□□□ -0.54
MMP2-208ENST00000570308 ATP1A2P50993 1020 aa11.7□□□□□ -0.54
MMP2-208ENST00000570308 SLMAPQ14BN4 828 aa11.7□□□□□ -0.54
MMP2-208ENST00000570308 THEMIS2Q5TEJ8 643 aa11.7□□□□□ -0.54
MMP2-208ENST00000570308 SLC30A9Q6PML9 568 aa11.7□□□□□ -0.54
MMP2-208ENST00000570308 GSPT2Q8IYD1 628 aaKnown RBP11.7□□□□□ -0.54
MMP2-208ENST00000570308 RASSF8Q8NHQ8 419 aa11.7□□□□□ -0.54
MMP2-208ENST00000570308 OSBPL9Q96SU4 736 aa11.7□□□□□ -0.54
MMP2-208ENST00000570308 SUDS3Q9H7L9 328 aaPredicted RBP11.7□□□□□ -0.54
MMP2-208ENST00000570308 HAUS2Q9NVX0 235 aa11.7□□□□□ -0.54
MMP2-208ENST00000570308 LRP5O75197 1615 aa11.7□□□□□ -0.54
MMP2-208ENST00000570308 LAMB2P55268 1798 aa11.7□□□□□ -0.54
MMP2-208ENST00000570308 A0A0U1RQJ8 604 aa11.7□□□□□ -0.54
MMP2-208ENST00000570308 CKAP4Q07065 602 aaKnown RBP11.7□□□□□ -0.54
MMP2-208ENST00000570308 ARMC3Q5W041 872 aa11.7□□□□□ -0.54
MMP2-208ENST00000570308 SND1Q7KZF4 910 aaKnown RBP eCLIP11.7□□□□□ -0.54
MMP2-208ENST00000570308 BZW1Q7L1Q6 419 aaKnown RBP11.7□□□□□ -0.54
MMP2-208ENST00000570308 LINC00301Q8NCQ3 95 aa11.7□□□□□ -0.54
MMP2-208ENST00000570308 NSMCE1Q8WV22 266 aa11.7□□□□□ -0.54
MMP2-208ENST00000570308 ATRIPQ8WXE1 791 aa11.7□□□□□ -0.54
MMP2-208ENST00000570308 EVI5LQ96CN4 794 aa11.7□□□□□ -0.54
MMP2-208ENST00000570308 SLC39A2Q9NP94 309 aa11.7□□□□□ -0.54
MMP2-208ENST00000570308 NEDD4P46934 1319 aa11.7□□□□□ -0.54
MMP2-208ENST00000570308 SPTLC2O15270 562 aa11.69□□□□□ -0.54
MMP2-208ENST00000570308 AHCYL1O43865 530 aa11.69□□□□□ -0.54
MMP2-208ENST00000570308 HSF2BPO75031 334 aa11.69□□□□□ -0.54
MMP2-208ENST00000570308 RTN3O95197 1032 aaPredicted RBP11.69□□□□□ -0.54
MMP2-208ENST00000570308 EPB41P11171 864 aaKnown RBP11.69□□□□□ -0.54
MMP2-208ENST00000570308 CCT2P78371 535 aaKnown RBP11.69□□□□□ -0.54
MMP2-208ENST00000570308 TRIM58Q8NG06 486 aa11.69□□□□□ -0.54
MMP2-208ENST00000570308 CCT8L2Q96SF2 557 aa11.69□□□□□ -0.54
MMP2-208ENST00000570308 YIPF3Q9GZM5 350 aa11.69□□□□□ -0.54
MMP2-208ENST00000570308 TUBE1Q9UJT0 475 aa11.69□□□□□ -0.54
MMP2-208ENST00000570308 PPFIA2O75334 1257 aa11.69□□□□□ -0.54
MMP2-208ENST00000570308 GUCY1B3Q02153 619 aa11.69□□□□□ -0.54
MMP2-208ENST00000570308 MTA1Q13330 715 aa11.69□□□□□ -0.54
MMP2-208ENST00000570308 MYSM1Q5VVJ2 828 aa11.69□□□□□ -0.54
MMP2-208ENST00000570308 MIS18BP1Q6P0N0 1132 aa11.69□□□□□ -0.54
MMP2-208ENST00000570308 NLRP14Q86W24 1093 aa11.69□□□□□ -0.54
MMP2-208ENST00000570308 CLASRPQ8N2M8 674 aaKnown RBP11.69□□□□□ -0.54
MMP2-208ENST00000570308 TBC1D31Q96DN5 1066 aa11.69□□□□□ -0.54
MMP2-208ENST00000570308 GPR108Q9NPR9 543 aa11.69□□□□□ -0.54
MMP2-208ENST00000570308 COL5A3P25940 1745 aaPredicted RBP11.69□□□□□ -0.54
MMP2-208ENST00000570308 ERICH2A1L162 156 aa11.69□□□□□ -0.54
MMP2-208ENST00000570308 AMPD2Q01433 879 aa11.69□□□□□ -0.54
MMP2-208ENST00000570308 MYO1EQ12965 1108 aa11.69□□□□□ -0.54
MMP2-208ENST00000570308 Q6ZUG5 572 aa11.69□□□□□ -0.54
MMP2-208ENST00000570308 PLA2G12BQ9BX93 195 aa11.69□□□□□ -0.54
MMP2-208ENST00000570308 ECHDC1Q9NTX5 307 aa11.69□□□□□ -0.54
MMP2-208ENST00000570308 YEATS4O95619 227 aa11.68□□□□□ -0.54
MMP2-208ENST00000570308 FESP07332 822 aa11.68□□□□□ -0.54
MMP2-208ENST00000570308 PFKFB1P16118 471 aa11.68□□□□□ -0.54
MMP2-208ENST00000570308 ACCSLQ4AC99 568 aa11.68□□□□□ -0.54
MMP2-208ENST00000570308 ALS2CLQ60I27 953 aa11.68□□□□□ -0.54
MMP2-208ENST00000570308 ISCA1Q9BUE6 129 aa11.68□□□□□ -0.54
MMP2-208ENST00000570308 MYH15Q9Y2K3 1946 aa11.68□□□□□ -0.54
MMP2-208ENST00000570308 PTPDC1A2A3K4 754 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms