RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 C17orf99Q6UX52 265 aa11.38□□□□□ -0.59
HCCAT5-201ENST00000569990 NEDD1Q8NHV4 660 aa11.38□□□□□ -0.59
HCCAT5-201ENST00000569990 NBPF3Q9H094 633 aa11.38□□□□□ -0.59
HCCAT5-201ENST00000569990 ARHGEF10LQ9HCE6 1279 aa11.38□□□□□ -0.59
HCCAT5-201ENST00000569990 PNMA3Q9UL41 463 aa11.38□□□□□ -0.59
HCCAT5-201ENST00000569990 TMX2Q9Y320 296 aa11.38□□□□□ -0.59
HCCAT5-201ENST00000569990 ZNF213O14771 459 aa11.37□□□□□ -0.59
HCCAT5-201ENST00000569990 TSPY3P0CV98 308 aa11.37□□□□□ -0.59
HCCAT5-201ENST00000569990 TSPY8P0CW00 308 aa11.37□□□□□ -0.59
HCCAT5-201ENST00000569990 VCAM1P19320 739 aa11.37□□□□□ -0.59
HCCAT5-201ENST00000569990 HOXA7P31268 230 aaPredicted RBP11.37□□□□□ -0.59
HCCAT5-201ENST00000569990 ATN1P54259 1190 aaPredicted RBP11.37□□□□□ -0.59
HCCAT5-201ENST00000569990 TFAP4Q01664 338 aa11.37□□□□□ -0.59
HCCAT5-201ENST00000569990 SP3Q02447 781 aa11.37□□□□□ -0.59
HCCAT5-201ENST00000569990 PTH1RQ03431 593 aa11.37□□□□□ -0.59
HCCAT5-201ENST00000569990 FAM47AQ5JRC9 791 aa11.37□□□□□ -0.59
HCCAT5-201ENST00000569990 AKNAD1Q5T1N1 836 aa11.37□□□□□ -0.59
HCCAT5-201ENST00000569990 TBC1D10CQ8IV04 446 aa11.37□□□□□ -0.59
HCCAT5-201ENST00000569990 STAG1Q8WVM7 1258 aa11.37□□□□□ -0.59
HCCAT5-201ENST00000569990 ESYT1Q9BSJ8 1104 aa11.37□□□□□ -0.59
HCCAT5-201ENST00000569990 ASCC2Q9H1I8 757 aaPredicted RBP11.37□□□□□ -0.59
HCCAT5-201ENST00000569990 SH2D4AQ9H788 454 aa11.37□□□□□ -0.59
HCCAT5-201ENST00000569990 NYAP2Q9P242 653 aa11.37□□□□□ -0.59
HCCAT5-201ENST00000569990 CPA4Q9UI42 421 aa11.37□□□□□ -0.59
HCCAT5-201ENST00000569990 CTNNA3Q9UI47 895 aa11.37□□□□□ -0.59
HCCAT5-201ENST00000569990 CASP8AP2Q9UKL3 1982 aa11.37□□□□□ -0.59
HCCAT5-201ENST00000569990 LAMA4Q16363 1823 aa11.37□□□□□ -0.59
HCCAT5-201ENST00000569990 TSPY2A6NKD2 308 aa11.36□□□□□ -0.59
HCCAT5-201ENST00000569990 BCRP11274 1271 aa11.36□□□□□ -0.59
HCCAT5-201ENST00000569990 PCP11498 1178 aaKnown RBP11.36□□□□□ -0.59
HCCAT5-201ENST00000569990 OSBPP22059 807 aa11.36□□□□□ -0.59
HCCAT5-201ENST00000569990 IRX3P78415 501 aaPredicted RBP11.36□□□□□ -0.59
HCCAT5-201ENST00000569990 ATP2B2Q01814 1243 aa11.36□□□□□ -0.59
HCCAT5-201ENST00000569990 IMMTQ16891 758 aaKnown RBP11.36□□□□□ -0.59
HCCAT5-201ENST00000569990 KIAA1755Q5JYT7 1200 aa11.36□□□□□ -0.59
HCCAT5-201ENST00000569990 SMCR8Q8TEV9 937 aaPredicted RBP11.36□□□□□ -0.59
HCCAT5-201ENST00000569990 LPAR1Q92633 364 aa11.36□□□□□ -0.59
HCCAT5-201ENST00000569990 KIF12Q96FN5 646 aa11.36□□□□□ -0.59
HCCAT5-201ENST00000569990 CEP95Q96GE4 821 aa11.36□□□□□ -0.59
HCCAT5-201ENST00000569990 VCPKMTQ9H867 229 aa11.36□□□□□ -0.59
HCCAT5-201ENST00000569990 MTMR4Q9NYA4 1195 aa11.36□□□□□ -0.59
HCCAT5-201ENST00000569990 USP17L15C9J2P7 530 aa11.35□□□□□ -0.59
HCCAT5-201ENST00000569990 USP17L13C9JLJ4 530 aa11.35□□□□□ -0.59
HCCAT5-201ENST00000569990 USP17L11C9JVI0 530 aa11.35□□□□□ -0.59
HCCAT5-201ENST00000569990 USP17L18D6R9N7 530 aa11.35□□□□□ -0.59
HCCAT5-201ENST00000569990 USP17L22D6RA61 530 aa11.35□□□□□ -0.59
HCCAT5-201ENST00000569990 USP17L17D6RBQ6 530 aa11.35□□□□□ -0.59
HCCAT5-201ENST00000569990 USP17L19D6RCP7 530 aa11.35□□□□□ -0.59
HCCAT5-201ENST00000569990 USP17L20D6RJB6 530 aa11.35□□□□□ -0.59
HCCAT5-201ENST00000569990 RANBP6O60518 1105 aaKnown RBP11.35□□□□□ -0.59
HCCAT5-201ENST00000569990 CDC45O75419 566 aa11.35□□□□□ -0.59
HCCAT5-201ENST00000569990 CAP1Q01518 475 aa11.35□□□□□ -0.59
HCCAT5-201ENST00000569990 USP17L24Q0WX57 530 aa11.35□□□□□ -0.59
HCCAT5-201ENST00000569990 RRP12Q5JTH9 1297 aaKnown RBP11.35□□□□□ -0.59
HCCAT5-201ENST00000569990 MFSD6Q6ZSS7 791 aa11.35□□□□□ -0.59
HCCAT5-201ENST00000569990 CD99L2Q8TCZ2 262 aa11.35□□□□□ -0.59
HCCAT5-201ENST00000569990 MKL1Q969V6 931 aa11.35□□□□□ -0.59
HCCAT5-201ENST00000569990 ERO1AQ96HE7 468 aa11.35□□□□□ -0.59
HCCAT5-201ENST00000569990 P2RX7Q99572 595 aaKnown RBP11.35□□□□□ -0.59
HCCAT5-201ENST00000569990 RNF41Q9H4P4 317 aaPredicted RBP11.35□□□□□ -0.59
HCCAT5-201ENST00000569990 RPAP3Q9H6T3 665 aaPredicted RBP11.35□□□□□ -0.59
HCCAT5-201ENST00000569990 TOMM22Q9NS69 142 aa11.35□□□□□ -0.59
HCCAT5-201ENST00000569990 NEDD4P46934 1319 aa11.35□□□□□ -0.59
HCCAT5-201ENST00000569990 TTLL1O95922 423 aa11.34□□□□□ -0.59
HCCAT5-201ENST00000569990 GCLCP48506 637 aaPredicted RBP11.34□□□□□ -0.59
HCCAT5-201ENST00000569990 HERVK_113P62684 666 aa11.34□□□□□ -0.59
HCCAT5-201ENST00000569990 LACTBP83111 547 aaPredicted RBP11.34□□□□□ -0.59
HCCAT5-201ENST00000569990 CATSPERGQ6ZRH7 1159 aa11.34□□□□□ -0.59
HCCAT5-201ENST00000569990 CTU1Q7Z7A3 348 aaKnown RBP11.34□□□□□ -0.59
HCCAT5-201ENST00000569990 SPICE1Q8N0Z3 855 aa11.34□□□□□ -0.59
HCCAT5-201ENST00000569990 NKX2-3Q8TAU0 364 aa11.34□□□□□ -0.59
HCCAT5-201ENST00000569990 MAP4K1Q92918 833 aa11.34□□□□□ -0.59
HCCAT5-201ENST00000569990 LSG1Q9H089 658 aaKnown RBP11.34□□□□□ -0.59
HCCAT5-201ENST00000569990 GOPCQ9HD26 462 aa11.34□□□□□ -0.59
HCCAT5-201ENST00000569990 SCUBE2Q9NQ36 999 aa11.34□□□□□ -0.59
HCCAT5-201ENST00000569990 IL17RBQ9NRM6 502 aa11.34□□□□□ -0.59
HCCAT5-201ENST00000569990 CLIP2Q9UDT6 1046 aa11.34□□□□□ -0.59
HCCAT5-201ENST00000569990 SYNPO2Q9UMS6 1093 aa11.34□□□□□ -0.59
HCCAT5-201ENST00000569990 F5H6K3 240 aa11.33□□□□□ -0.6
HCCAT5-201ENST00000569990 WDR46O15213 610 aaKnown RBP11.33□□□□□ -0.6
HCCAT5-201ENST00000569990 NMT2O60551 498 aa11.33□□□□□ -0.6
HCCAT5-201ENST00000569990 NDUFB10O96000 172 aa11.33□□□□□ -0.6
HCCAT5-201ENST00000569990 CYP21A2P08686 494 aa11.33□□□□□ -0.6
HCCAT5-201ENST00000569990 NOVP48745 357 aa11.33□□□□□ -0.6
HCCAT5-201ENST00000569990 NT5C2P49902 561 aa11.33□□□□□ -0.6
HCCAT5-201ENST00000569990 KLRC3Q07444 240 aa11.33□□□□□ -0.6
HCCAT5-201ENST00000569990 FAM110CQ1W6H9 321 aa11.33□□□□□ -0.6
HCCAT5-201ENST00000569990 PPP4R3BQ5MIZ7 849 aa11.33□□□□□ -0.6
HCCAT5-201ENST00000569990 POTEEQ6S8J3 1075 aa11.33□□□□□ -0.6
HCCAT5-201ENST00000569990 CASC1Q6TDU7 716 aa11.33□□□□□ -0.6
HCCAT5-201ENST00000569990 KIAA1211Q6ZU35 1233 aa11.33□□□□□ -0.6
HCCAT5-201ENST00000569990 OTOP1Q7RTM1 612 aa11.33□□□□□ -0.6
HCCAT5-201ENST00000569990 LRRC47Q8N1G4 583 aaKnown RBP11.33□□□□□ -0.6
HCCAT5-201ENST00000569990 ANKRD13CQ8N6S4 541 aa11.33□□□□□ -0.6
HCCAT5-201ENST00000569990 ESR2Q92731 530 aa11.33□□□□□ -0.6
HCCAT5-201ENST00000569990 MORF4L1Q9UBU8 362 aa11.33□□□□□ -0.6
HCCAT5-201ENST00000569990 RBM8AQ9Y5S9 174 aaKnown RBP11.33□□□□□ -0.6
HCCAT5-201ENST00000569990 B4E1Z4 1266 aa11.32□□□□□ -0.6
HCCAT5-201ENST00000569990 CTGFP29279 349 aa11.32□□□□□ -0.6
HCCAT5-201ENST00000569990 KIF22Q14807 665 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms