RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 B2RBV5 119 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 J3QL48 77 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 NFKBIEO00221 500 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 RFPL3O75679 317 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 TRPA1O75762 1119 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 ALDH1L1O75891 902 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 UPP2O95045 317 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 MAP3K6O95382 1288 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 APBA3O96018 575 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 NME2P22392 152 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 SOX5P35711 763 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 EPHB1P54762 984 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 NFKB2Q00653 900 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 PLAURQ03405 335 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 FOXC1Q12948 553 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 LRRC14Q15048 493 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 CHRNA2Q15822 529 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 EZH2Q15910 746 aaKnown RBP4.17□□□□□ -1.74
CNOT1-221ENST00000569924 NFE2Q16621 373 aaPredicted RBP4.17□□□□□ -1.74
CNOT1-221ENST00000569924 LRRFIP1Q32MZ4 808 aaKnown RBP4.17□□□□□ -1.74
CNOT1-221ENST00000569924 NBPF8Q3BBV2 869 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 PERM1Q5SV97 790 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 FAM182BQ5T319 152 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 SPRYD7Q5W111 196 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 MRM1Q6IN84 353 aaKnown RBP4.17□□□□□ -1.74
CNOT1-221ENST00000569924 RUFY4Q6ZNE9 571 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 EEPD1Q7L9B9 569 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 TTC6Q86TZ1 520 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 RAVER1Q8IY67 606 aaKnown RBP4.17□□□□□ -1.74
CNOT1-221ENST00000569924 CDK19Q9BWU1 502 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 SPATA9Q9BWV2 254 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 FAM126AQ9BYI3 521 aaPredicted RBP4.17□□□□□ -1.74
CNOT1-221ENST00000569924 EFCC1Q9HA90 598 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 STRN4Q9NRL3 753 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 PKD2L1Q9P0L9 805 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 MCM8Q9UJA3 840 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 PCDHB14Q9Y5E9 798 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 NRKQ7Z2Y5 1582 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 KIAA1210Q9ULL0 1709 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 USP19O94966 1318 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 ACEP12821 1306 aa4.17□□□□□ -1.74
CNOT1-221ENST00000569924 CAMTA1Q9Y6Y1 1673 aa4.16□□□□□ -1.74
CNOT1-221ENST00000569924 NUP188Q5SRE5 1749 aa4.16□□□□□ -1.74
CNOT1-221ENST00000569924 PARP4Q9UKK3 1724 aaKnown RBP4.16□□□□□ -1.74
CNOT1-221ENST00000569924 PDE2AO00408 941 aaPredicted RBP4.16□□□□□ -1.74
CNOT1-221ENST00000569924 GUCY2CP25092 1073 aa4.16□□□□□ -1.74
CNOT1-221ENST00000569924 YY1P25490 414 aa4.16□□□□□ -1.74
CNOT1-221ENST00000569924 RPL6Q02878 288 aaKnown RBP4.16□□□□□ -1.74
CNOT1-221ENST00000569924 SFSWAPQ12872 951 aaKnown RBP4.16□□□□□ -1.74
CNOT1-221ENST00000569924 PABPC4Q13310 644 aaKnown RBP eCLIP4.16□□□□□ -1.74
CNOT1-221ENST00000569924 TTF1Q15361 905 aaPredicted RBP4.16□□□□□ -1.74
CNOT1-221ENST00000569924 CT47A1Q5JQC4 288 aaPredicted RBP4.16□□□□□ -1.74
CNOT1-221ENST00000569924 HGSNATQ68CP4 663 aa4.16□□□□□ -1.74
CNOT1-221ENST00000569924 SCARA3Q6AZY7 606 aa4.16□□□□□ -1.74
CNOT1-221ENST00000569924 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.16□□□□□ -1.74
CNOT1-221ENST00000569924 ZNF598Q86UK7 904 aaKnown RBP4.16□□□□□ -1.74
CNOT1-221ENST00000569924 LINC00528Q8N1L1 170 aa4.16□□□□□ -1.74
CNOT1-221ENST00000569924 TCP11L2Q8N4U5 519 aa4.16□□□□□ -1.74
CNOT1-221ENST00000569924 ZBTB38Q8NAP3 1195 aaPredicted RBP4.16□□□□□ -1.74
CNOT1-221ENST00000569924 ASAP3Q8TDY4 903 aa4.16□□□□□ -1.74
CNOT1-221ENST00000569924 TSR2Q969E8 191 aaKnown RBP4.16□□□□□ -1.74
CNOT1-221ENST00000569924 PNMA5Q96PV4 448 aa4.16□□□□□ -1.74
CNOT1-221ENST00000569924 HHIPQ96QV1 700 aa4.16□□□□□ -1.74
CNOT1-221ENST00000569924 RPS6KC1Q96S38 1066 aa4.16□□□□□ -1.74
CNOT1-221ENST00000569924 TM9SF2Q99805 663 aa4.16□□□□□ -1.74
CNOT1-221ENST00000569924 RUBCNLQ9H714 662 aa4.16□□□□□ -1.74
CNOT1-221ENST00000569924 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.16□□□□□ -1.74
CNOT1-221ENST00000569924 SLC12A7Q9Y666 1083 aa4.16□□□□□ -1.74
CNOT1-221ENST00000569924 RGPD3A6NKT7 1758 aaPredicted RBP4.16□□□□□ -1.74
CNOT1-221ENST00000569924 RGPD4Q7Z3J3 1758 aa4.16□□□□□ -1.74
CNOT1-221ENST00000569924 PEAK1Q9H792 1746 aa4.15□□□□□ -1.74
CNOT1-221ENST00000569924 TTC24A2A3L6 582 aaPredicted RBP4.15□□□□□ -1.75
CNOT1-221ENST00000569924 IQCA1LA6NCM1 817 aa4.15□□□□□ -1.75
CNOT1-221ENST00000569924 MEIS3P2A8K0S8 358 aa4.15□□□□□ -1.75
CNOT1-221ENST00000569924 UPK3BL1B0FP48 263 aa4.15□□□□□ -1.75
CNOT1-221ENST00000569924 UPK3BL2E5RIL1 263 aa4.15□□□□□ -1.75
CNOT1-221ENST00000569924 IRS4O14654 1257 aaPredicted RBP4.15□□□□□ -1.75
CNOT1-221ENST00000569924 EFSO43281 561 aa4.15□□□□□ -1.75
CNOT1-221ENST00000569924 TSPAN6O43657 245 aa4.15□□□□□ -1.75
CNOT1-221ENST00000569924 ADCY3O60266 1144 aa4.15□□□□□ -1.75
CNOT1-221ENST00000569924 PDE8AO60658 829 aa4.15□□□□□ -1.75
CNOT1-221ENST00000569924 GCP02774 474 aa4.15□□□□□ -1.75
CNOT1-221ENST00000569924 F11P03951 625 aa4.15□□□□□ -1.75
CNOT1-221ENST00000569924 FAM157BP0CG42 384 aa4.15□□□□□ -1.75
CNOT1-221ENST00000569924 RHOQP17081 205 aa4.15□□□□□ -1.75
CNOT1-221ENST00000569924 NFKB1P19838 968 aa4.15□□□□□ -1.75
CNOT1-221ENST00000569924 ARNTP27540 789 aa4.15□□□□□ -1.75
CNOT1-221ENST00000569924 ZNF157P51786 506 aaPredicted RBP4.15□□□□□ -1.75
CNOT1-221ENST00000569924 UBE4AQ14139 1066 aa4.15□□□□□ -1.75
CNOT1-221ENST00000569924 NCAPHQ15003 741 aa4.15□□□□□ -1.75
CNOT1-221ENST00000569924 MAP9Q49MG5 647 aa4.15□□□□□ -1.75
CNOT1-221ENST00000569924 AKAP4Q5JQC9 854 aa4.15□□□□□ -1.75
CNOT1-221ENST00000569924 ZNF697Q5TEC3 545 aa4.15□□□□□ -1.75
CNOT1-221ENST00000569924 NUTM2GQ5VZR2 741 aa4.15□□□□□ -1.75
CNOT1-221ENST00000569924 LLGL2Q6P1M3 1020 aa4.15□□□□□ -1.75
CNOT1-221ENST00000569924 RNF180Q86T96 592 aa4.15□□□□□ -1.75
CNOT1-221ENST00000569924 WDR75Q8IWA0 830 aaKnown RBP4.15□□□□□ -1.75
CNOT1-221ENST00000569924 LRRC47Q8N1G4 583 aaKnown RBP4.15□□□□□ -1.75
CNOT1-221ENST00000569924 TAB3Q8N5C8 712 aaPredicted RBP4.15□□□□□ -1.75
CNOT1-221ENST00000569924 ZSCAN1Q8NBB4 408 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms