RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 SDSP20132 328 aa15.54■□□□□ 0.08
CNOT1-220ENST00000569916 ZNF589Q86UQ0 364 aaPredicted RBP15.54■□□□□ 0.08
CNOT1-220ENST00000569916 RAET1EQ8TD07 263 aa15.54■□□□□ 0.08
CNOT1-220ENST00000569916 SH2D4AQ9H788 454 aa15.54■□□□□ 0.08
CNOT1-220ENST00000569916 VCPKMTQ9H867 229 aa15.54■□□□□ 0.08
CNOT1-220ENST00000569916 KANSL2Q9H9L4 492 aa15.54■□□□□ 0.08
CNOT1-220ENST00000569916 CCDC171Q6TFL3 1326 aa15.53■□□□□ 0.08
CNOT1-220ENST00000569916 IGKV6D-41A0A0C4DH26 115 aa15.53■□□□□ 0.08
CNOT1-220ENST00000569916 SPDYE16A6NNV3 312 aaPredicted RBP15.53■□□□□ 0.08
CNOT1-220ENST00000569916 CNMDO75829 334 aa15.53■□□□□ 0.08
CNOT1-220ENST00000569916 FLT3LGP49771 235 aa15.53■□□□□ 0.08
CNOT1-220ENST00000569916 ERVK-9P63128 1117 aa15.53■□□□□ 0.08
CNOT1-220ENST00000569916 ERVK-24P63145 666 aa15.53■□□□□ 0.08
CNOT1-220ENST00000569916 LBX2Q6XYB7 198 aa15.53■□□□□ 0.08
CNOT1-220ENST00000569916 NBPF11Q86T75 865 aa15.53■□□□□ 0.08
CNOT1-220ENST00000569916 GPRC5AQ8NFJ5 357 aa15.53■□□□□ 0.08
CNOT1-220ENST00000569916 LPAR1Q92633 364 aa15.53■□□□□ 0.08
CNOT1-220ENST00000569916 COA7Q96BR5 231 aa15.53■□□□□ 0.08
CNOT1-220ENST00000569916 PAGR1Q9BTK6 254 aa15.53■□□□□ 0.08
CNOT1-220ENST00000569916 ZNF287Q9HBT7 754 aa15.53■□□□□ 0.08
CNOT1-220ENST00000569916 ZMYM6O95789 1325 aa15.52■□□□□ 0.08
CNOT1-220ENST00000569916 POTEFA5A3E0 1075 aa15.52■□□□□ 0.08
CNOT1-220ENST00000569916 GRK4P32298 578 aa15.52■□□□□ 0.08
CNOT1-220ENST00000569916 MLLT1Q03111 559 aaPredicted RBP15.52■□□□□ 0.08
CNOT1-220ENST00000569916 IRF5Q13568 498 aa15.52■□□□□ 0.08
CNOT1-220ENST00000569916 ALX1Q15699 326 aa15.52■□□□□ 0.08
CNOT1-220ENST00000569916 Q3C1V9 767 aa15.52■□□□□ 0.08
CNOT1-220ENST00000569916 SPICE1Q8N0Z3 855 aa15.52■□□□□ 0.08
CNOT1-220ENST00000569916 TANGO6Q9C0B7 1094 aa15.52■□□□□ 0.08
CNOT1-220ENST00000569916 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.52■□□□□ 0.08
CNOT1-220ENST00000569916 RABGAP1Q9Y3P9 1069 aa15.52■□□□□ 0.08
CNOT1-220ENST00000569916 WDR46O15213 610 aaKnown RBP15.51■□□□□ 0.07
CNOT1-220ENST00000569916 SLC3A2P08195 630 aaKnown RBP15.51■□□□□ 0.07
CNOT1-220ENST00000569916 HSPD1P10809 573 aaKnown RBP15.51■□□□□ 0.07
CNOT1-220ENST00000569916 GSPT1P15170 499 aaKnown RBP15.51■□□□□ 0.07
CNOT1-220ENST00000569916 ATP2B2Q01814 1243 aa15.51■□□□□ 0.07
CNOT1-220ENST00000569916 CTDSPL2Q05D32 466 aa15.51■□□□□ 0.07
CNOT1-220ENST00000569916 PDE4BQ07343 736 aa15.51■□□□□ 0.07
CNOT1-220ENST00000569916 TTC22Q5TAA0 569 aa15.51■□□□□ 0.07
CNOT1-220ENST00000569916 ZNF444Q8N0Y2 327 aaPredicted RBP15.51■□□□□ 0.07
CNOT1-220ENST00000569916 SLAIN1Q8ND83 568 aa15.51■□□□□ 0.07
CNOT1-220ENST00000569916 PORCNQ9H237 461 aa15.51■□□□□ 0.07
CNOT1-220ENST00000569916 BTBD7Q9P203 1132 aa15.51■□□□□ 0.07
CNOT1-220ENST00000569916 NYAP2Q9P242 653 aa15.51■□□□□ 0.07
CNOT1-220ENST00000569916 ANAPC4Q9UJX5 808 aa15.51■□□□□ 0.07
CNOT1-220ENST00000569916 TNRC18O15417 2968 aaPredicted RBP15.51■□□□□ 0.07
CNOT1-220ENST00000569916 ZNF236Q9UL36 1845 aa15.5■□□□□ 0.07
CNOT1-220ENST00000569916 ADCY3O60266 1144 aa15.5■□□□□ 0.07
CNOT1-220ENST00000569916 COG2Q14746 738 aa15.5■□□□□ 0.07
CNOT1-220ENST00000569916 PXYLP1Q8TE99 480 aa15.5■□□□□ 0.07
CNOT1-220ENST00000569916 CEP95Q96GE4 821 aa15.5■□□□□ 0.07
CNOT1-220ENST00000569916 GOPCQ9HD26 462 aa15.5■□□□□ 0.07
CNOT1-220ENST00000569916 DIAPH3Q9NSV4 1193 aa15.5■□□□□ 0.07
CNOT1-220ENST00000569916 GJD2Q9UKL4 321 aa15.5■□□□□ 0.07
CNOT1-220ENST00000569916 TACC3Q9Y6A5 838 aa15.5■□□□□ 0.07
CNOT1-220ENST00000569916 BRCA2P51587 3418 aa15.49■□□□□ 0.07
CNOT1-220ENST00000569916 HIP1O00291 1037 aa15.49■□□□□ 0.07
CNOT1-220ENST00000569916 FLOT1O75955 427 aa15.49■□□□□ 0.07
CNOT1-220ENST00000569916 MYCP01106 439 aaPredicted RBP15.49■□□□□ 0.07
CNOT1-220ENST00000569916 FGAP02671 866 aa15.49■□□□□ 0.07
CNOT1-220ENST00000569916 TSPY3P0CV98 308 aa15.49■□□□□ 0.07
CNOT1-220ENST00000569916 TSPY8P0CW00 308 aa15.49■□□□□ 0.07
CNOT1-220ENST00000569916 ELNP15502 786 aa15.49■□□□□ 0.07
CNOT1-220ENST00000569916 MAPK4P31152 587 aa15.49■□□□□ 0.07
CNOT1-220ENST00000569916 MTFR1Q15390 333 aa15.49■□□□□ 0.07
CNOT1-220ENST00000569916 FAM47AQ5JRC9 791 aa15.49■□□□□ 0.07
CNOT1-220ENST00000569916 CWC27Q6UX04 472 aaKnown RBP15.49■□□□□ 0.07
CNOT1-220ENST00000569916 NEDD1Q8NHV4 660 aa15.49■□□□□ 0.07
CNOT1-220ENST00000569916 MTMR4Q9NYA4 1195 aa15.49■□□□□ 0.07
CNOT1-220ENST00000569916 KIAA0100Q14667 2235 aaKnown RBP15.48■□□□□ 0.07
CNOT1-220ENST00000569916 FGRP09769 529 aa15.48■□□□□ 0.07
CNOT1-220ENST00000569916 DSG3P32926 999 aa15.48■□□□□ 0.07
CNOT1-220ENST00000569916 MFAP1P55081 439 aaKnown RBP15.48■□□□□ 0.07
CNOT1-220ENST00000569916 TFAP4Q01664 338 aa15.48■□□□□ 0.07
CNOT1-220ENST00000569916 GPR142Q7Z601 462 aa15.48■□□□□ 0.07
CNOT1-220ENST00000569916 ATG4CQ96DT6 458 aa15.48■□□□□ 0.07
CNOT1-220ENST00000569916 TMEM106CQ9BVX2 250 aa15.48■□□□□ 0.07
CNOT1-220ENST00000569916 INCENPQ9NQS7 918 aa15.48■□□□□ 0.07
CNOT1-220ENST00000569916 HOXC10Q9NYD6 342 aa15.48■□□□□ 0.07
CNOT1-220ENST00000569916 F5H6K3 240 aa15.47■□□□□ 0.07
CNOT1-220ENST00000569916 TTLL1O95922 423 aa15.47■□□□□ 0.07
CNOT1-220ENST00000569916 UBXN2AP68543 259 aa15.47■□□□□ 0.07
CNOT1-220ENST00000569916 CCNA1P78396 465 aa15.47■□□□□ 0.07
CNOT1-220ENST00000569916 KLRC3Q07444 240 aa15.47■□□□□ 0.07
CNOT1-220ENST00000569916 FAM83BQ5T0W9 1011 aa15.47■□□□□ 0.07
CNOT1-220ENST00000569916 PLEKHH3Q7Z736 793 aa15.47■□□□□ 0.07
CNOT1-220ENST00000569916 SOCS4Q8WXH5 440 aa15.47■□□□□ 0.07
CNOT1-220ENST00000569916 MKL1Q969V6 931 aa15.47■□□□□ 0.07
CNOT1-220ENST00000569916 FBXO28Q9NVF7 368 aa15.47■□□□□ 0.07
CNOT1-220ENST00000569916 BIN2Q9UBW5 565 aaPredicted RBP15.47■□□□□ 0.07
CNOT1-220ENST00000569916 CLIP2Q9UDT6 1046 aa15.47■□□□□ 0.07
CNOT1-220ENST00000569916 SYNPO2Q9UMS6 1093 aa15.47■□□□□ 0.07
CNOT1-220ENST00000569916 TSPY2A6NKD2 308 aa15.46■□□□□ 0.07
CNOT1-220ENST00000569916 ORC4O43929 436 aa15.46■□□□□ 0.07
CNOT1-220ENST00000569916 RAD21O60216 631 aa15.46■□□□□ 0.07
CNOT1-220ENST00000569916 NDUFB10O96000 172 aa15.46■□□□□ 0.07
CNOT1-220ENST00000569916 INHAP05111 366 aa15.46■□□□□ 0.07
CNOT1-220ENST00000569916 CCL5P13501 91 aa15.46■□□□□ 0.07
CNOT1-220ENST00000569916 EN2P19622 333 aaPredicted RBP15.46■□□□□ 0.07
CNOT1-220ENST00000569916 MORN1Q5T089 497 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms