RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 ZSCAN29Q8IWY8 852 aaPredicted RBP5.9□□□□□ -1.46
CNOT1-219ENST00000569882 HOOK2Q96ED9 719 aa5.9□□□□□ -1.46
CNOT1-219ENST00000569882 GMLQ99445 158 aa5.9□□□□□ -1.46
CNOT1-219ENST00000569882 LRP2BPQ9P2M1 347 aa5.9□□□□□ -1.46
CNOT1-219ENST00000569882 SERPINA10Q9UK55 444 aa5.9□□□□□ -1.46
CNOT1-219ENST00000569882 PCDHB9Q9Y5E1 797 aa5.9□□□□□ -1.46
CNOT1-219ENST00000569882 FAM205AQ6ZU69 1335 aa5.9□□□□□ -1.47
CNOT1-219ENST00000569882 AKAP11Q9UKA4 1901 aa5.89□□□□□ -1.47
CNOT1-219ENST00000569882 MYH2Q9UKX2 1941 aa5.89□□□□□ -1.47
CNOT1-219ENST00000569882 PAPPA2Q9BXP8 1791 aa5.89□□□□□ -1.47
CNOT1-219ENST00000569882 RASSF10A6NK89 507 aa5.89□□□□□ -1.47
CNOT1-219ENST00000569882 IFIT2P09913 472 aaKnown RBP5.89□□□□□ -1.47
CNOT1-219ENST00000569882 RLBP1P12271 317 aa5.89□□□□□ -1.47
CNOT1-219ENST00000569882 PHKA1P46020 1223 aa5.89□□□□□ -1.47
CNOT1-219ENST00000569882 IREB2P48200 963 aaKnown RBP5.89□□□□□ -1.47
CNOT1-219ENST00000569882 TIMM10P62072 90 aa5.89□□□□□ -1.47
CNOT1-219ENST00000569882 FKBP1BP68106 108 aa5.89□□□□□ -1.47
CNOT1-219ENST00000569882 GSTO1P78417 241 aa5.89□□□□□ -1.47
CNOT1-219ENST00000569882 ATP8B2P98198 1209 aa5.89□□□□□ -1.47
CNOT1-219ENST00000569882 PTSQ03393 145 aa5.89□□□□□ -1.47
CNOT1-219ENST00000569882 MTX1Q13505 466 aa5.89□□□□□ -1.47
CNOT1-219ENST00000569882 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.89□□□□□ -1.47
CNOT1-219ENST00000569882 CST9Q5W186 159 aa5.89□□□□□ -1.47
CNOT1-219ENST00000569882 CCDC102BQ68D86 513 aa5.89□□□□□ -1.47
CNOT1-219ENST00000569882 RGMBQ6NW40 437 aa5.89□□□□□ -1.47
CNOT1-219ENST00000569882 FBXO33Q7Z6M2 555 aa5.89□□□□□ -1.47
CNOT1-219ENST00000569882 SAPCD2Q86UD0 394 aa5.89□□□□□ -1.47
CNOT1-219ENST00000569882 CLASRPQ8N2M8 674 aaKnown RBP5.89□□□□□ -1.47
CNOT1-219ENST00000569882 CERS5Q8N5B7 392 aa5.89□□□□□ -1.47
CNOT1-219ENST00000569882 DNAJC5GQ8N7S2 189 aa5.89□□□□□ -1.47
CNOT1-219ENST00000569882 VGLL2Q8N8G2 317 aa5.89□□□□□ -1.47
CNOT1-219ENST00000569882 XAGE2Q96GT9 111 aa5.89□□□□□ -1.47
CNOT1-219ENST00000569882 DEFB129Q9H1M3 183 aa5.89□□□□□ -1.47
CNOT1-219ENST00000569882 TDRD3Q9H7E2 651 aaKnown RBP5.89□□□□□ -1.47
CNOT1-219ENST00000569882 CYLDQ9NQC7 956 aa5.89□□□□□ -1.47
CNOT1-219ENST00000569882 RAI14Q9P0K7 980 aa5.89□□□□□ -1.47
CNOT1-219ENST00000569882 PGAP2Q9UHJ9 254 aa5.89□□□□□ -1.47
CNOT1-219ENST00000569882 ANGEL1Q9UNK9 670 aaKnown RBP5.89□□□□□ -1.47
CNOT1-219ENST00000569882 SUGT1Q9Y2Z0 365 aa5.89□□□□□ -1.47
CNOT1-219ENST00000569882 PPP2R3BQ9Y5P8 575 aa5.89□□□□□ -1.47
CNOT1-219ENST00000569882 CSADQ9Y600 493 aa5.89□□□□□ -1.47
CNOT1-219ENST00000569882 COL1A1P02452 1464 aaPredicted RBP5.89□□□□□ -1.47
CNOT1-219ENST00000569882 UBE2Q2LH0YL09 131 aa5.88□□□□□ -1.47
CNOT1-219ENST00000569882 MSTNO14793 375 aa5.88□□□□□ -1.47
CNOT1-219ENST00000569882 ZBTB7BO15156 539 aaPredicted RBP5.88□□□□□ -1.47
CNOT1-219ENST00000569882 WDHD1O75717 1129 aaPredicted RBP5.88□□□□□ -1.47
CNOT1-219ENST00000569882 LDHCP07864 332 aa5.88□□□□□ -1.47
CNOT1-219ENST00000569882 FGFR2P21802 821 aa5.88□□□□□ -1.47
CNOT1-219ENST00000569882 ADORA1P30542 326 aa5.88□□□□□ -1.47
CNOT1-219ENST00000569882 MAP2K2P36507 400 aa5.88□□□□□ -1.47
CNOT1-219ENST00000569882 CTCFP49711 727 aaPredicted RBP5.88□□□□□ -1.47
CNOT1-219ENST00000569882 MARSP56192 900 aaKnown RBP5.88□□□□□ -1.47
CNOT1-219ENST00000569882 PDE3AQ14432 1141 aa5.88□□□□□ -1.47
CNOT1-219ENST00000569882 RASA3Q14644 834 aa5.88□□□□□ -1.47
CNOT1-219ENST00000569882 TNNI3KQ59H18 835 aa5.88□□□□□ -1.47
CNOT1-219ENST00000569882 DLK2Q6UY11 383 aa5.88□□□□□ -1.47
CNOT1-219ENST00000569882 AACSQ86V21 672 aa5.88□□□□□ -1.47
CNOT1-219ENST00000569882 JMYQ8N9B5 988 aa5.88□□□□□ -1.47
CNOT1-219ENST00000569882 GPATCH3Q96I76 525 aa5.88□□□□□ -1.47
CNOT1-219ENST00000569882 PRMT6Q96LA8 375 aaPredicted RBP5.88□□□□□ -1.47
CNOT1-219ENST00000569882 ZNF70Q9UC06 446 aaPredicted RBP5.88□□□□□ -1.47
CNOT1-219ENST00000569882 EXOC6BQ9Y2D4 811 aa5.88□□□□□ -1.47
CNOT1-219ENST00000569882 FPGT-TNNI3KV9GXZ4 949 aa5.88□□□□□ -1.47
CNOT1-219ENST00000569882 ZNF646O15015 1829 aaPredicted RBP5.88□□□□□ -1.47
CNOT1-219ENST00000569882 CA12O43570 354 aa5.87□□□□□ -1.47
CNOT1-219ENST00000569882 AOC2O75106 756 aa5.87□□□□□ -1.47
CNOT1-219ENST00000569882 ADH1AP07327 375 aa5.87□□□□□ -1.47
CNOT1-219ENST00000569882 PRDX5P30044 214 aa5.87□□□□□ -1.47
CNOT1-219ENST00000569882 CACNB3P54284 484 aa5.87□□□□□ -1.47
CNOT1-219ENST00000569882 HDLBPQ00341 1268 aaKnown RBP5.87□□□□□ -1.47
CNOT1-219ENST00000569882 SREBF2Q12772 1141 aa5.87□□□□□ -1.47
CNOT1-219ENST00000569882 TCP10Q12799 353 aa5.87□□□□□ -1.47
CNOT1-219ENST00000569882 RASGRF1Q13972 1273 aa5.87□□□□□ -1.47
CNOT1-219ENST00000569882 DCAF15Q66K64 600 aa5.87□□□□□ -1.47
CNOT1-219ENST00000569882 CEP85Q6P2H3 762 aa5.87□□□□□ -1.47
CNOT1-219ENST00000569882 RPAP2Q8IXW5 612 aaPredicted RBP5.87□□□□□ -1.47
CNOT1-219ENST00000569882 TNS4Q8IZW8 715 aa5.87□□□□□ -1.47
CNOT1-219ENST00000569882 Q8N3U1 123 aa5.87□□□□□ -1.47
CNOT1-219ENST00000569882 GPR161Q8N6U8 529 aaKnown RBP5.87□□□□□ -1.47
CNOT1-219ENST00000569882 SPATA5Q8NB90 893 aa5.87□□□□□ -1.47
CNOT1-219ENST00000569882 BANK1Q8NDB2 785 aa5.87□□□□□ -1.47
CNOT1-219ENST00000569882 SSH3Q8TE77 659 aa5.87□□□□□ -1.47
CNOT1-219ENST00000569882 KIF1BPQ96EK5 621 aa5.87□□□□□ -1.47
CNOT1-219ENST00000569882 HHIPL1Q96JK4 782 aa5.87□□□□□ -1.47
CNOT1-219ENST00000569882 IL1RAPL2Q9NP60 686 aa5.87□□□□□ -1.47
CNOT1-219ENST00000569882 POLMQ9NP87 494 aaPredicted RBP5.87□□□□□ -1.47
CNOT1-219ENST00000569882 USP40Q9NVE5 1235 aa5.87□□□□□ -1.47
CNOT1-219ENST00000569882 PCDHAC2Q9Y5I4 1007 aa5.87□□□□□ -1.47
CNOT1-219ENST00000569882 IRS2Q9Y4H2 1338 aa5.87□□□□□ -1.47
CNOT1-219ENST00000569882 IDH1O75874 414 aaKnown RBP5.86□□□□□ -1.47
CNOT1-219ENST00000569882 BAG3O95817 575 aa5.86□□□□□ -1.47
CNOT1-219ENST00000569882 LBX1P52954 281 aa5.86□□□□□ -1.47
CNOT1-219ENST00000569882 KIF23Q02241 960 aaPredicted RBP5.86□□□□□ -1.47
CNOT1-219ENST00000569882 PICALMQ13492 652 aa5.86□□□□□ -1.47
CNOT1-219ENST00000569882 LCE3BQ5TA77 95 aa5.86□□□□□ -1.47
CNOT1-219ENST00000569882 FOXD4L5Q5VV16 416 aaPredicted RBP5.86□□□□□ -1.47
CNOT1-219ENST00000569882 OTUD7BQ6GQQ9 843 aa5.86□□□□□ -1.47
CNOT1-219ENST00000569882 NAA16Q6N069 864 aaPredicted RBP5.86□□□□□ -1.47
CNOT1-219ENST00000569882 HHIPL2Q6UWX4 724 aa5.86□□□□□ -1.47
CNOT1-219ENST00000569882 MOB2Q70IA6 237 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms