RNA–Protein interactions for RNA: ENST00000569773.1

GDE1-204, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 3

Gene GDE1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-204ENST00000569773 IGHA1P01876 353 aa7.69□□□□□ -1.18
GDE1-204ENST00000569773 XRCC5P13010 732 aaKnown RBP7.69□□□□□ -1.18
GDE1-204ENST00000569773 CABP4P57796 275 aa7.69□□□□□ -1.18
GDE1-204ENST00000569773 PTPN12Q05209 780 aaKnown RBP7.69□□□□□ -1.18
GDE1-204ENST00000569773 MEI1Q5TIA1 1274 aa7.69□□□□□ -1.18
GDE1-204ENST00000569773 LINC00114Q6XXX2 140 aa7.69□□□□□ -1.18
GDE1-204ENST00000569773 CRELD1Q96HD1 420 aa7.69□□□□□ -1.18
GDE1-204ENST00000569773 BACH2Q9BYV9 841 aa7.69□□□□□ -1.18
GDE1-204ENST00000569773 CLEC4MQ9H2X3 399 aaPredicted RBP7.69□□□□□ -1.18
GDE1-204ENST00000569773 MKL2Q9ULH7 1088 aa7.69□□□□□ -1.18
GDE1-204ENST00000569773 KIAA1551Q9HCM1 1747 aa7.69□□□□□ -1.18
GDE1-204ENST00000569773 SMG6Q86US8 1419 aaKnown RBP7.69□□□□□ -1.18
GDE1-204ENST00000569773 KIF13BQ9NQT8 1826 aa7.68□□□□□ -1.18
GDE1-204ENST00000569773 MYH14Q7Z406 1995 aaKnown RBP7.68□□□□□ -1.18
GDE1-204ENST00000569773 H3BRJ5 948 aa7.68□□□□□ -1.18
GDE1-204ENST00000569773 FBXO24O75426 580 aa7.68□□□□□ -1.18
GDE1-204ENST00000569773 VAMP1P23763 118 aa7.68□□□□□ -1.18
GDE1-204ENST00000569773 RASSF7Q02833 373 aa7.68□□□□□ -1.18
GDE1-204ENST00000569773 PCDH1Q08174 1060 aa7.68□□□□□ -1.18
GDE1-204ENST00000569773 SUZ12Q15022 739 aaKnown RBP7.68□□□□□ -1.18
GDE1-204ENST00000569773 TRAPPC3LQ5T215 181 aa7.68□□□□□ -1.18
GDE1-204ENST00000569773 NPM2Q86SE8 214 aaKnown RBP7.68□□□□□ -1.18
GDE1-204ENST00000569773 TTF2Q9UNY4 1162 aaKnown RBP7.68□□□□□ -1.18
GDE1-204ENST00000569773 CNTNAP5Q8WYK1 1306 aa7.68□□□□□ -1.18
GDE1-204ENST00000569773 E9PSI1 815 aa7.67□□□□□ -1.18
GDE1-204ENST00000569773 GNB5O14775 395 aa7.67□□□□□ -1.18
GDE1-204ENST00000569773 ESRRAP11474 423 aaPredicted RBP7.67□□□□□ -1.18
GDE1-204ENST00000569773 FAAP100Q0VG06 881 aa7.67□□□□□ -1.18
GDE1-204ENST00000569773 IKBKEQ14164 716 aa7.67□□□□□ -1.18
GDE1-204ENST00000569773 ZNF423Q2M1K9 1284 aa7.67□□□□□ -1.18
GDE1-204ENST00000569773 LDLRAD1Q5T700 205 aa7.67□□□□□ -1.18
GDE1-204ENST00000569773 HGSNATQ68CP4 663 aa7.67□□□□□ -1.18
GDE1-204ENST00000569773 TPTE2Q6XPS3 522 aa7.67□□□□□ -1.18
GDE1-204ENST00000569773 PODNQ7Z5L7 613 aa7.67□□□□□ -1.18
GDE1-204ENST00000569773 SLC7A3Q8WY07 619 aa7.67□□□□□ -1.18
GDE1-204ENST00000569773 SYTL4Q96C24 671 aaPredicted RBP7.67□□□□□ -1.18
GDE1-204ENST00000569773 PLVAPQ9BX97 442 aa7.67□□□□□ -1.18
GDE1-204ENST00000569773 WASHC2AQ641Q2 1341 aa7.67□□□□□ -1.18
GDE1-204ENST00000569773 PCDH11XQ9BZA7 1347 aa7.67□□□□□ -1.18
GDE1-204ENST00000569773 PCDH11YQ9BZA8 1340 aa7.67□□□□□ -1.18
GDE1-204ENST00000569773 CLSPNQ9HAW4 1339 aa7.67□□□□□ -1.18
GDE1-204ENST00000569773 SCN11AQ9UI33 1791 aa7.66□□□□□ -1.18
GDE1-204ENST00000569773 BRCA1P38398 1863 aaKnown RBP7.66□□□□□ -1.18
GDE1-204ENST00000569773 SOX1O00570 391 aaPredicted RBP7.66□□□□□ -1.18
GDE1-204ENST00000569773 ZNF157P51786 506 aaPredicted RBP7.66□□□□□ -1.18
GDE1-204ENST00000569773 FAM117BQ6P1L5 589 aa7.66□□□□□ -1.18
GDE1-204ENST00000569773 AMIGO3Q86WK7 504 aa7.66□□□□□ -1.18
GDE1-204ENST00000569773 COL23A1Q86Y22 540 aaPredicted RBP7.66□□□□□ -1.18
GDE1-204ENST00000569773 TMEM87AQ8NBN3 555 aa7.66□□□□□ -1.18
GDE1-204ENST00000569773 RAPGEF4Q8WZA2 1011 aa7.66□□□□□ -1.18
GDE1-204ENST00000569773 ZFYVE1Q9HBF4 777 aa7.66□□□□□ -1.18
GDE1-204ENST00000569773 TFCP2L1Q9NZI6 479 aa7.66□□□□□ -1.18
GDE1-204ENST00000569773 GPN3Q9UHW5 284 aaPredicted RBP7.66□□□□□ -1.18
GDE1-204ENST00000569773 CCNL1Q9UK58 526 aaPredicted RBP7.66□□□□□ -1.18
GDE1-204ENST00000569773 PPM1HQ9ULR3 514 aa7.66□□□□□ -1.18
GDE1-204ENST00000569773 CICQ96RK0 1608 aaPredicted RBP7.66□□□□□ -1.18
GDE1-204ENST00000569773 C4AP0C0L4 1744 aa7.66□□□□□ -1.18
GDE1-204ENST00000569773 SETDB1Q15047 1291 aa7.65□□□□□ -1.18
GDE1-204ENST00000569773 TAF1CQ15572 869 aaPredicted RBP7.65□□□□□ -1.18
GDE1-204ENST00000569773 RPS26P11Q5JNZ5 115 aaPredicted RBP7.65□□□□□ -1.18
GDE1-204ENST00000569773 NLGN2Q8NFZ4 835 aa7.65□□□□□ -1.18
GDE1-204ENST00000569773 PALLDQ8WX93 1383 aa7.65□□□□□ -1.18
GDE1-204ENST00000569773 PLEKHG2Q9H7P9 1386 aa7.65□□□□□ -1.18
GDE1-204ENST00000569773 SEC31BQ9NQW1 1179 aa7.65□□□□□ -1.18
GDE1-204ENST00000569773 POLKQ9UBT6 870 aa7.65□□□□□ -1.18
GDE1-204ENST00000569773 ADAMTS7Q9UKP4 1686 aa7.64□□□□□ -1.19
GDE1-204ENST00000569773 A0A0A0MRY4 1105 aa7.64□□□□□ -1.19
GDE1-204ENST00000569773 FAM229AH3BQW9 127 aa7.64□□□□□ -1.19
GDE1-204ENST00000569773 FSCN2O14926 492 aa7.64□□□□□ -1.19
GDE1-204ENST00000569773 DEAF1O75398 565 aaPredicted RBP7.64□□□□□ -1.19
GDE1-204ENST00000569773 B3GALT4O96024 378 aa7.64□□□□□ -1.19
GDE1-204ENST00000569773 GSK3AP49840 483 aa7.64□□□□□ -1.19
GDE1-204ENST00000569773 BEND7Q8N7W2 519 aaPredicted RBP7.64□□□□□ -1.19
GDE1-204ENST00000569773 SCARF2Q96GP6 870 aaPredicted RBP7.64□□□□□ -1.19
GDE1-204ENST00000569773 TJP1Q07157 1748 aa7.64□□□□□ -1.19
GDE1-204ENST00000569773 KDRP35968 1356 aa7.63□□□□□ -1.19
GDE1-204ENST00000569773 PIK3R2O00459 728 aa7.63□□□□□ -1.19
GDE1-204ENST00000569773 YBX3P16989 372 aaKnown RBP eCLIP7.63□□□□□ -1.19
GDE1-204ENST00000569773 POLD1P28340 1107 aa7.63□□□□□ -1.19
GDE1-204ENST00000569773 MPRIPQ6WCQ1 1025 aa7.63□□□□□ -1.19
GDE1-204ENST00000569773 DTWD1Q8N5C7 304 aa7.63□□□□□ -1.19
GDE1-204ENST00000569773 GALNT11Q8NCW6 608 aa7.63□□□□□ -1.19
GDE1-204ENST00000569773 PIGBQ92521 554 aa7.63□□□□□ -1.19
GDE1-204ENST00000569773 N4BP2Q86UW6 1770 aaPredicted RBP7.63□□□□□ -1.19
GDE1-204ENST00000569773 IGSF1Q8N6C5 1336 aa7.62□□□□□ -1.19
GDE1-204ENST00000569773 ENC1O14682 589 aa7.62□□□□□ -1.19
GDE1-204ENST00000569773 CELA3AP09093 270 aa7.62□□□□□ -1.19
GDE1-204ENST00000569773 ARL4DP49703 201 aa7.62□□□□□ -1.19
GDE1-204ENST00000569773 ST13P50502 369 aaKnown RBP7.62□□□□□ -1.19
GDE1-204ENST00000569773 RAC1P63000 192 aa7.62□□□□□ -1.19
GDE1-204ENST00000569773 GSTM4Q03013 218 aa7.62□□□□□ -1.19
GDE1-204ENST00000569773 C19orf57Q0VDD7 668 aa7.62□□□□□ -1.19
GDE1-204ENST00000569773 EIF4A2Q14240 407 aaKnown RBP7.62□□□□□ -1.19
GDE1-204ENST00000569773 CCDC85BQ15834 202 aaPredicted RBP7.62□□□□□ -1.19
GDE1-204ENST00000569773 FMR1NBQ8N0W7 255 aaPredicted RBP7.62□□□□□ -1.19
GDE1-204ENST00000569773 WNT8BQ93098 351 aa7.62□□□□□ -1.19
GDE1-204ENST00000569773 KLHDC7BQ96G42 594 aa7.62□□□□□ -1.19
GDE1-204ENST00000569773 NECAB3Q96P71 396 aaPredicted RBP7.62□□□□□ -1.19
GDE1-204ENST00000569773 CEP44Q9C0F1 390 aa7.62□□□□□ -1.19
GDE1-204ENST00000569773 TMEM39AQ9NV64 488 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms