RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 ARHGEF9O43307 516 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 PPP6R2O75170 966 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 RANBP1P43487 201 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 KIF2CQ99661 725 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 NDE1Q9NXR1 346 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 TACC3Q9Y6A5 838 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 UHRF1BP1LA0JNW5 1464 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 A0A1B0GW55 424 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 DUX4L2P0CJ85 424 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 DUX4L3P0CJ86 424 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 DUX4L4P0CJ87 422 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 DUX4L5P0CJ88 424 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 DUX4L6P0CJ89 424 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 DUX4L7P0CJ90 424 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 ACADSP16219 412 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 ASPHQ12797 758 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 PDE1CQ14123 709 aaPredicted RBP7.83□□□□□ -1.16
CNOT1-216ENST00000569240 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.83□□□□□ -1.16
CNOT1-216ENST00000569240 CCDC144CPQ8IYA2 1237 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 KCNH5Q8NCM2 988 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 DUX4Q9UBX2 424 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 TMCC1O94876 653 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 GSTA1P08263 222 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 SKAP1Q86WV1 359 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 C6orf50Q9HD87 102 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 CCDC61Q9Y6R9 512 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 PCF11O94913 1555 aaKnown RBP7.82□□□□□ -1.16
CNOT1-216ENST00000569240 ARHGAP5Q13017 1502 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 IQCA1LA6NCM1 817 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 INAQ16352 499 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 ZNF530Q6P9A1 599 aaPredicted RBP7.82□□□□□ -1.16
CNOT1-216ENST00000569240 TRMT2AQ8IZ69 625 aaKnown RBP7.82□□□□□ -1.16
CNOT1-216ENST00000569240 CCDC124Q96CT7 223 aaKnown RBP7.82□□□□□ -1.16
CNOT1-216ENST00000569240 FAM129AQ9BZQ8 928 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 LCMT1Q9UIC8 334 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 RCOR1Q9UKL0 485 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 KIAA0232Q92628 1395 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 CTNND1O60716 968 aaKnown RBP7.82□□□□□ -1.16
CNOT1-216ENST00000569240 NEK2P51955 445 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 SMTNP53814 917 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 E2F5Q15329 346 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 CSGALNACT2Q8N6G5 542 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 LRP2BPQ9P2M1 347 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 GADD45BO75293 160 aaPredicted RBP7.82□□□□□ -1.16
CNOT1-216ENST00000569240 VAMP4O75379 141 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 RPSAP08865 295 aaKnown RBP7.82□□□□□ -1.16
CNOT1-216ENST00000569240 AFMP43652 599 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 LRMPQ12912 555 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 POLR3EQ9NVU0 708 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 ARHGAP42A6NI28 874 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 IPO5O00410 1097 aaKnown RBP7.82□□□□□ -1.16
CNOT1-216ENST00000569240 KRT15P19012 456 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 CAV1Q03135 178 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 SV2BQ7L1I2 683 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 PLA2G4DQ86XP0 818 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 NEK9Q8TD19 979 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 ATP6V0A4Q9HBG4 840 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 RIC8AQ9NPQ8 531 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 YEATS2Q9ULM3 1422 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 KIF14Q15058 1648 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 LRRIQ3A6PVS8 624 aaPredicted RBP7.82□□□□□ -1.16
CNOT1-216ENST00000569240 TADA3O75528 432 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 EPB41P11171 864 aaKnown RBP7.82□□□□□ -1.16
CNOT1-216ENST00000569240 COG1Q8WTW3 980 aa7.82□□□□□ -1.16
CNOT1-216ENST00000569240 TNFAIP3P21580 790 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 IGHMBP2P38935 993 aaKnown RBP7.81□□□□□ -1.16
CNOT1-216ENST00000569240 KPNB1Q14974 876 aaKnown RBP7.81□□□□□ -1.16
CNOT1-216ENST00000569240 SLC44A4Q53GD3 710 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 CERS3Q8IU89 383 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 SGSM3Q96HU1 749 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 SLF1Q9BQI6 1058 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 TBC1D23Q9NUY8 699 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 ERBB4Q15303 1308 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 POTEB3A0JP26 581 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 KRT5P13647 590 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 IKQ13123 557 aaPredicted RBP7.81□□□□□ -1.16
CNOT1-216ENST00000569240 MYSM1Q5VVJ2 828 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 POTEBQ6S5H4 581 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 ANO5Q75V66 913 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 TERB1Q8NA31 727 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 SDCCAG3Q96C92 435 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 FAM81BQ96LP2 452 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 ZSWIM6Q9HCJ5 1215 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 GRIN2BQ13224 1484 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 SBNO2Q9Y2G9 1366 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 PABPN1LA6NDY0 278 aaKnown RBP7.81□□□□□ -1.16
CNOT1-216ENST00000569240 ABLIM1O14639 778 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 IDH1O75874 414 aaKnown RBP7.81□□□□□ -1.16
CNOT1-216ENST00000569240 HDAC4P56524 1084 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 NLRP6P59044 892 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 CDK19Q9BWU1 502 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 TEX13AQ9BXU3 409 aaPredicted RBP7.81□□□□□ -1.16
CNOT1-216ENST00000569240 UBA5Q9GZZ9 404 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 NRDE2Q9H7Z3 1164 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 GGA2Q9UJY4 613 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 ENO4A6NNW6 628 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 RNF113AO15541 343 aaKnown RBP7.81□□□□□ -1.16
CNOT1-216ENST00000569240 CALUO43852 315 aaPredicted RBP7.81□□□□□ -1.16
CNOT1-216ENST00000569240 ABCB6Q9NP58 842 aa7.81□□□□□ -1.16
CNOT1-216ENST00000569240 SPAG7O75391 227 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms