RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 GUCD1Q96NT3 240 aa7.51□□□□□ -1.21
CDH13-212ENST00000569144 PURBQ96QR8 312 aaKnown RBP7.51□□□□□ -1.21
CDH13-212ENST00000569144 UBE2OQ9C0C9 1292 aaKnown RBP7.51□□□□□ -1.21
CDH13-212ENST00000569144 TTF2Q9UNY4 1162 aaKnown RBP7.51□□□□□ -1.21
CDH13-212ENST00000569144 KCNH4Q9UQ05 1017 aa7.51□□□□□ -1.21
CDH13-212ENST00000569144 JAG2Q9Y219 1238 aa7.51□□□□□ -1.21
CDH13-212ENST00000569144 MAP3K2Q9Y2U5 619 aa7.51□□□□□ -1.21
CDH13-212ENST00000569144 PIK3CDO00329 1044 aa7.5□□□□□ -1.21
CDH13-212ENST00000569144 TRAK2O60296 914 aa7.5□□□□□ -1.21
CDH13-212ENST00000569144 TAF5LO75529 589 aa7.5□□□□□ -1.21
CDH13-212ENST00000569144 UPP2O95045 317 aa7.5□□□□□ -1.21
CDH13-212ENST00000569144 CSF1RP07333 972 aa7.5□□□□□ -1.21
CDH13-212ENST00000569144 ELNP15502 786 aa7.5□□□□□ -1.21
CDH13-212ENST00000569144 SYN1P17600 705 aa7.5□□□□□ -1.21
CDH13-212ENST00000569144 CRKP46108 304 aa7.5□□□□□ -1.21
CDH13-212ENST00000569144 FLT3LGP49771 235 aa7.5□□□□□ -1.21
CDH13-212ENST00000569144 NEXNQ0ZGT2 675 aa7.5□□□□□ -1.21
CDH13-212ENST00000569144 MOGSQ13724 837 aa7.5□□□□□ -1.21
CDH13-212ENST00000569144 TSGA10IPQ3SY00 556 aa7.5□□□□□ -1.21
CDH13-212ENST00000569144 MFSD14BQ5SR56 506 aa7.5□□□□□ -1.21
CDH13-212ENST00000569144 C6orf118Q5T5N4 469 aa7.5□□□□□ -1.21
CDH13-212ENST00000569144 DCAF15Q66K64 600 aa7.5□□□□□ -1.21
CDH13-212ENST00000569144 ZNF787Q6DD87 383 aa7.5□□□□□ -1.21
CDH13-212ENST00000569144 KSR2Q6VAB6 950 aa7.5□□□□□ -1.21
CDH13-212ENST00000569144 UBE3BQ7Z3V4 1068 aa7.5□□□□□ -1.21
CDH13-212ENST00000569144 LINC00528Q8N1L1 170 aa7.5□□□□□ -1.21
CDH13-212ENST00000569144 AGBL1Q96MI9 1066 aa7.5□□□□□ -1.21
CDH13-212ENST00000569144 MBIPQ9NS73 344 aa7.5□□□□□ -1.21
CDH13-212ENST00000569144 DOLKQ9UPQ8 538 aa7.5□□□□□ -1.21
CDH13-212ENST00000569144 VCANP13611 3396 aa7.5□□□□□ -1.21
CDH13-212ENST00000569144 RPAP1Q9BWH6 1393 aaPredicted RBP7.49□□□□□ -1.21
CDH13-212ENST00000569144 MYH3P11055 1940 aa7.49□□□□□ -1.21
CDH13-212ENST00000569144 ALPK3Q96L96 1907 aa7.49□□□□□ -1.21
CDH13-212ENST00000569144 ANKRD18BA2A2Z9 1011 aa7.49□□□□□ -1.21
CDH13-212ENST00000569144 PI4KAP2A4QPH2 592 aa7.49□□□□□ -1.21
CDH13-212ENST00000569144 NEURL1BA8MQ27 555 aa7.49□□□□□ -1.21
CDH13-212ENST00000569144 ADH1AP07327 375 aa7.49□□□□□ -1.21
CDH13-212ENST00000569144 BMP2P12643 396 aa7.49□□□□□ -1.21
CDH13-212ENST00000569144 SCTRP47872 440 aa7.49□□□□□ -1.21
CDH13-212ENST00000569144 ERVK-9P63128 1117 aa7.49□□□□□ -1.21
CDH13-212ENST00000569144 CWF19L2Q2TBE0 894 aaKnown RBP7.49□□□□□ -1.21
CDH13-212ENST00000569144 FAM83AQ86UY5 434 aa7.49□□□□□ -1.21
CDH13-212ENST00000569144 PI4KAP1Q8N8J0 262 aa7.49□□□□□ -1.21
CDH13-212ENST00000569144 TDRD7Q8NHU6 1098 aaKnown RBP7.49□□□□□ -1.21
CDH13-212ENST00000569144 GLMNQ92990 594 aa7.49□□□□□ -1.21
CDH13-212ENST00000569144 ZFP42Q96MM3 310 aa7.49□□□□□ -1.21
CDH13-212ENST00000569144 TSEN34Q9BSV6 310 aaKnown RBP7.49□□□□□ -1.21
CDH13-212ENST00000569144 CHMP4AQ9BY43 222 aa7.49□□□□□ -1.21
CDH13-212ENST00000569144 ZNF341Q9BYN7 854 aa7.49□□□□□ -1.21
CDH13-212ENST00000569144 ZMYND15Q9H091 742 aa7.49□□□□□ -1.21
CDH13-212ENST00000569144 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.49□□□□□ -1.21
CDH13-212ENST00000569144 SENP2Q9HC62 589 aa7.49□□□□□ -1.21
CDH13-212ENST00000569144 COL2A1P02458 1487 aaPredicted RBP7.49□□□□□ -1.21
CDH13-212ENST00000569144 TNPO2O14787 897 aaKnown RBP7.48□□□□□ -1.21
CDH13-212ENST00000569144 ZNF853P0CG23 659 aa7.48□□□□□ -1.21
CDH13-212ENST00000569144 CYP2C8P10632 490 aa7.48□□□□□ -1.21
CDH13-212ENST00000569144 INPP5BP32019 993 aa7.48□□□□□ -1.21
CDH13-212ENST00000569144 CACNB3P54284 484 aa7.48□□□□□ -1.21
CDH13-212ENST00000569144 CASP7P55210 303 aa7.48□□□□□ -1.21
CDH13-212ENST00000569144 HDLBPQ00341 1268 aaKnown RBP7.48□□□□□ -1.21
CDH13-212ENST00000569144 RELBQ01201 579 aa7.48□□□□□ -1.21
CDH13-212ENST00000569144 OXLD1Q5BKU9 147 aa7.48□□□□□ -1.21
CDH13-212ENST00000569144 FKBP1CQ5VVH2 108 aa7.48□□□□□ -1.21
CDH13-212ENST00000569144 CCDC30Q5VVM6 783 aa7.48□□□□□ -1.21
CDH13-212ENST00000569144 GPAT2Q6NUI2 795 aa7.48□□□□□ -1.21
CDH13-212ENST00000569144 PLPP7Q8NBV4 271 aa7.48□□□□□ -1.21
CDH13-212ENST00000569144 C11orf49Q9H6J7 331 aa7.48□□□□□ -1.21
CDH13-212ENST00000569144 TMOD2Q9NZR1 351 aa7.48□□□□□ -1.21
CDH13-212ENST00000569144 ZNF112Q9UJU3 913 aa7.48□□□□□ -1.21
CDH13-212ENST00000569144 ELL2O00472 640 aaPredicted RBP7.47□□□□□ -1.21
CDH13-212ENST00000569144 CXCL11O14625 94 aa7.47□□□□□ -1.21
CDH13-212ENST00000569144 SKIP12755 728 aa7.47□□□□□ -1.21
CDH13-212ENST00000569144 GCKRQ14397 625 aa7.47□□□□□ -1.21
CDH13-212ENST00000569144 NOL9Q5SY16 702 aaKnown RBP7.47□□□□□ -1.21
CDH13-212ENST00000569144 CCDC146Q8IYE0 955 aa7.47□□□□□ -1.21
CDH13-212ENST00000569144 CCER1Q8TC90 406 aaPredicted RBP7.47□□□□□ -1.21
CDH13-212ENST00000569144 KIFC2Q96AC6 838 aa7.47□□□□□ -1.21
CDH13-212ENST00000569144 RUNDC1Q96C34 613 aa7.47□□□□□ -1.21
CDH13-212ENST00000569144 HMGCRP04035 888 aa7.46□□□□□ -1.22
CDH13-212ENST00000569144 SNRPBP14678 240 aaKnown RBP7.46□□□□□ -1.22
CDH13-212ENST00000569144 HIBADHP31937 336 aaKnown RBP7.46□□□□□ -1.22
CDH13-212ENST00000569144 GNAI1P63096 354 aa7.46□□□□□ -1.22
CDH13-212ENST00000569144 IFIT5Q13325 482 aaKnown RBP7.46□□□□□ -1.22
CDH13-212ENST00000569144 UBE4AQ14139 1066 aa7.46□□□□□ -1.22
CDH13-212ENST00000569144 MAP7D1Q3KQU3 841 aa7.46□□□□□ -1.22
CDH13-212ENST00000569144 MIGA2Q7L4E1 593 aa7.46□□□□□ -1.22
CDH13-212ENST00000569144 FASTKD5Q7L8L6 764 aaKnown RBP7.46□□□□□ -1.22
CDH13-212ENST00000569144 MAFAQ8NHW3 353 aaPredicted RBP7.46□□□□□ -1.22
CDH13-212ENST00000569144 TEKT1Q969V4 418 aa7.46□□□□□ -1.22
CDH13-212ENST00000569144 COA7Q96BR5 231 aa7.46□□□□□ -1.22
CDH13-212ENST00000569144 CALR3Q96L12 384 aaKnown RBP7.46□□□□□ -1.22
CDH13-212ENST00000569144 ZDHHC15Q96MV8 337 aa7.46□□□□□ -1.22
CDH13-212ENST00000569144 FAM161BQ96MY7 647 aa7.46□□□□□ -1.22
CDH13-212ENST00000569144 UCN2Q96RP3 112 aa7.46□□□□□ -1.22
CDH13-212ENST00000569144 MRIQ9BWK5 157 aa7.46□□□□□ -1.22
CDH13-212ENST00000569144 ZNF395Q9H8N7 513 aaPredicted RBP7.46□□□□□ -1.22
CDH13-212ENST00000569144 IFT57Q9NWB7 429 aa7.46□□□□□ -1.22
CDH13-212ENST00000569144 OGDHLQ9ULD0 1010 aa7.46□□□□□ -1.22
CDH13-212ENST00000569144 SLC45A1Q9Y2W3 748 aa7.46□□□□□ -1.22
CDH13-212ENST00000569144 A0A1B0GUL6 1792 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms