RNA–Protein interactions for RNA: ENST00000568631.5

RNPS1-223, Transcript of RNA binding protein with serine rich domain 1, human

APPRIS P1 TSL 5 BASIC

Gene RNPS1, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNPS1-223	ENST00000568631	ARHGEF10L	Q9HCE6	1279 aa		18.82	■□□□□ 0.6
RNPS1-223	ENST00000568631	CLEC11A	Q9Y240	323 aa		18.82	■□□□□ 0.6
RNPS1-223	ENST00000568631	PARP1	P09874	1014 aa	Known RBP	18.81	■□□□□ 0.6
RNPS1-223	ENST00000568631	SSRP1	Q08945	709 aa	Known RBP	18.81	■□□□□ 0.6
RNPS1-223	ENST00000568631	TMTC3	Q6ZXV5	915 aa		18.81	■□□□□ 0.6
RNPS1-223	ENST00000568631	SIAH1	Q8IUQ4	282 aa		18.81	■□□□□ 0.6
RNPS1-223	ENST00000568631	TRIM22	Q8IYM9	498 aa		18.81	■□□□□ 0.6
RNPS1-223	ENST00000568631	MTMR7	Q9Y216	660 aa		18.81	■□□□□ 0.6
RNPS1-223	ENST00000568631	STK36	Q9NRP7	1315 aa		18.81	■□□□□ 0.6
RNPS1-223	ENST00000568631	SSC5D	A1L4H1	1573 aa		18.81	■□□□□ 0.6
RNPS1-223	ENST00000568631	DTNB	O60941	627 aa		18.81	■□□□□ 0.6
RNPS1-223	ENST00000568631	PDHB	P11177	359 aa		18.81	■□□□□ 0.6
RNPS1-223	ENST00000568631	NF2	P35240	595 aa		18.81	■□□□□ 0.6
RNPS1-223	ENST00000568631	LARP1B	Q659C4	914 aa	Known RBP	18.81	■□□□□ 0.6
RNPS1-223	ENST00000568631	WRNIP1	Q96S55	665 aa		18.81	■□□□□ 0.6
RNPS1-223	ENST00000568631	LZTS2	Q9BRK4	669 aa		18.81	■□□□□ 0.6
RNPS1-223	ENST00000568631	ORC3	Q9UBD5	711 aa	Predicted RBP	18.81	■□□□□ 0.6
RNPS1-223	ENST00000568631	MAD2L2	Q9UI95	211 aa		18.81	■□□□□ 0.6
RNPS1-223	ENST00000568631	POLR2A	P24928	1970 aa	Known RBP	18.8	■□□□□ 0.6
RNPS1-223	ENST00000568631	PALM3	A6NDB9	673 aa	Predicted RBP	18.8	■□□□□ 0.6
RNPS1-223	ENST00000568631	FMNL1	O95466	1100 aa	Predicted RBP	18.8	■□□□□ 0.6
RNPS1-223	ENST00000568631	SNHG28	P0DPA3	235 aa		18.8	■□□□□ 0.6
RNPS1-223	ENST00000568631	FDPS	P14324	419 aa	Known RBP	18.8	■□□□□ 0.6
RNPS1-223	ENST00000568631	SYT1	P21579	422 aa		18.8	■□□□□ 0.6
RNPS1-223	ENST00000568631	GMCL1P1	Q8NEA9	526 aa		18.8	■□□□□ 0.6
RNPS1-223	ENST00000568631	KLRG1	Q96E93	195 aa		18.8	■□□□□ 0.6
RNPS1-223	ENST00000568631	CDCA5	Q96FF9	252 aa		18.8	■□□□□ 0.6
RNPS1-223	ENST00000568631	SH2D4A	Q9H788	454 aa		18.8	■□□□□ 0.6
RNPS1-223	ENST00000568631	PPP1R12B	O60237	982 aa	Predicted RBP	18.79	■□□□□ 0.6
RNPS1-223	ENST00000568631	PPFIA3	O75145	1194 aa		18.79	■□□□□ 0.6
RNPS1-223	ENST00000568631	INPP5B	P32019	993 aa		18.79	■□□□□ 0.6
RNPS1-223	ENST00000568631	ASPRV1	Q53RT3	343 aa		18.79	■□□□□ 0.6
RNPS1-223	ENST00000568631	NBPF11	Q86T75	865 aa		18.79	■□□□□ 0.6
RNPS1-223	ENST00000568631	SCYL3	Q8IZE3	742 aa		18.79	■□□□□ 0.6
RNPS1-223	ENST00000568631	WASF1	Q92558	559 aa		18.79	■□□□□ 0.6
RNPS1-223	ENST00000568631	PHKB	Q93100	1093 aa		18.79	■□□□□ 0.6
RNPS1-223	ENST00000568631	SLC26A6	Q9BXS9	759 aa		18.79	■□□□□ 0.6
RNPS1-223	ENST00000568631	RNF26	Q9BY78	433 aa	Predicted RBP	18.79	■□□□□ 0.6
RNPS1-223	ENST00000568631	USP17L5	A8MUK1	530 aa		18.78	■□□□□ 0.6
RNPS1-223	ENST00000568631	STX6	O43752	255 aa		18.78	■□□□□ 0.6
RNPS1-223	ENST00000568631	PLEKHA8P1	O95397	391 aa		18.78	■□□□□ 0.6
RNPS1-223	ENST00000568631	AKAP17A	Q02040	695 aa	Known RBP	18.78	■□□□□ 0.6
RNPS1-223	ENST00000568631	USP17L2	Q6R6M4	530 aa		18.78	■□□□□ 0.6
RNPS1-223	ENST00000568631	CMTR1	Q8N1G2	835 aa	Known RBP	18.78	■□□□□ 0.6
RNPS1-223	ENST00000568631	CCDC82	Q8N4S0	544 aa		18.78	■□□□□ 0.6
RNPS1-223	ENST00000568631	GLIS2	Q9BZE0	524 aa	Predicted RBP	18.78	■□□□□ 0.6
RNPS1-223	ENST00000568631	PICK1	Q9NRD5	415 aa		18.78	■□□□□ 0.6
RNPS1-223	ENST00000568631	TMX2	Q9Y320	296 aa		18.78	■□□□□ 0.6
RNPS1-223	ENST00000568631	USP2	O75604	605 aa	Predicted RBP	18.78	■□□□□ 0.6
RNPS1-223	ENST00000568631	FUT2	Q10981	343 aa		18.78	■□□□□ 0.6
RNPS1-223	ENST00000568631	SLFN13	Q68D06	897 aa		18.78	■□□□□ 0.6
RNPS1-223	ENST00000568631	LDHD	Q86WU2	507 aa		18.78	■□□□□ 0.6
RNPS1-223	ENST00000568631	STAG2	Q8N3U4	1231 aa		18.78	■□□□□ 0.6
RNPS1-223	ENST00000568631	SRBD1	Q8N5C6	995 aa	Known RBP	18.78	■□□□□ 0.6
RNPS1-223	ENST00000568631	DCAF4	Q8WV16	495 aa		18.78	■□□□□ 0.6
RNPS1-223	ENST00000568631	WDR33	Q9C0J8	1336 aa	Known RBP	18.77	■□□□□ 0.6
RNPS1-223	ENST00000568631		A0A1W2PRG0	241 aa		18.77	■□□□□ 0.6
RNPS1-223	ENST00000568631	KLRF2	D3W0D1	207 aa		18.77	■□□□□ 0.6
RNPS1-223	ENST00000568631		F5H6K3	240 aa		18.77	■□□□□ 0.6
RNPS1-223	ENST00000568631	PRPF3	O43395	683 aa	Known RBP	18.77	■□□□□ 0.6
RNPS1-223	ENST00000568631	DEXI	O95424	95 aa		18.77	■□□□□ 0.6
RNPS1-223	ENST00000568631	POTEI	P0CG38	1075 aa		18.77	■□□□□ 0.6
RNPS1-223	ENST00000568631	POTEJ	P0CG39	1038 aa		18.77	■□□□□ 0.6
RNPS1-223	ENST00000568631	SMARCA1	P28370	1054 aa		18.77	■□□□□ 0.6
RNPS1-223	ENST00000568631	KLRC3	Q07444	240 aa		18.77	■□□□□ 0.6
RNPS1-223	ENST00000568631	PKP1	Q13835	747 aa		18.77	■□□□□ 0.6
RNPS1-223	ENST00000568631	NOL9	Q5SY16	702 aa	Known RBP	18.77	■□□□□ 0.6
RNPS1-223	ENST00000568631	GPATCH4	Q5T3I0	446 aa	Known RBP	18.77	■□□□□ 0.6
RNPS1-223	ENST00000568631	DLK2	Q6UY11	383 aa		18.77	■□□□□ 0.6
RNPS1-223	ENST00000568631	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	18.77	■□□□□ 0.6	5e-8	■■□□□ 11.6
RNPS1-223	ENST00000568631	GOPC	Q9HD26	462 aa		18.77	■□□□□ 0.6
RNPS1-223	ENST00000568631	RBM27	Q9P2N5	1060 aa	Known RBP	18.77	■□□□□ 0.6
RNPS1-223	ENST00000568631	MYH4	Q9Y623	1939 aa		18.76	■□□□□ 0.59
RNPS1-223	ENST00000568631	RAD21	O60216	631 aa		18.76	■□□□□ 0.59
RNPS1-223	ENST00000568631	BRD1	O95696	1058 aa		18.76	■□□□□ 0.59
RNPS1-223	ENST00000568631	GOLGA8H	P0CJ92	632 aa		18.76	■□□□□ 0.59
RNPS1-223	ENST00000568631	ECE1	P42892	770 aa		18.76	■□□□□ 0.59
RNPS1-223	ENST00000568631	SLC1A4	P43007	532 aa		18.76	■□□□□ 0.59
RNPS1-223	ENST00000568631	IREB2	P48200	963 aa	Known RBP	18.76	■□□□□ 0.59
RNPS1-223	ENST00000568631	ZNF543	Q08ER8	600 aa		18.76	■□□□□ 0.59
RNPS1-223	ENST00000568631	RGS22	Q8NE09	1264 aa		18.76	■□□□□ 0.59
RNPS1-223	ENST00000568631	ZKSCAN4	Q969J2	545 aa	Predicted RBP	18.76	■□□□□ 0.59
RNPS1-223	ENST00000568631	NMRK2	Q9NPI5	230 aa		18.76	■□□□□ 0.59
RNPS1-223	ENST00000568631	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	18.76	■□□□□ 0.59
RNPS1-223	ENST00000568631	CNTNAP5	Q8WYK1	1306 aa		18.76	■□□□□ 0.59
RNPS1-223	ENST00000568631		H3BQV1	296 aa		18.76	■□□□□ 0.59
RNPS1-223	ENST00000568631	MAP3K9	P80192	1104 aa		18.76	■□□□□ 0.59
RNPS1-223	ENST00000568631	PRKG1	Q13976	671 aa		18.76	■□□□□ 0.59
RNPS1-223	ENST00000568631	CCDC96	Q2M329	555 aa		18.76	■□□□□ 0.59
RNPS1-223	ENST00000568631	IFFO2	Q5TF58	517 aa		18.76	■□□□□ 0.59
RNPS1-223	ENST00000568631	MAP1S	Q66K74	1059 aa	Predicted RBP	18.76	■□□□□ 0.59
RNPS1-223	ENST00000568631	ACER1	Q8TDN7	264 aa		18.76	■□□□□ 0.59
RNPS1-223	ENST00000568631	ZNF526	Q8TF50	670 aa	Predicted RBP	18.76	■□□□□ 0.59
RNPS1-223	ENST00000568631	GMCL1	Q96IK5	515 aa		18.76	■□□□□ 0.59
RNPS1-223	ENST00000568631	ALG1	Q9BT22	464 aa		18.76	■□□□□ 0.59
RNPS1-223	ENST00000568631	AS3MT	Q9HBK9	375 aa		18.76	■□□□□ 0.59
RNPS1-223	ENST00000568631	FZD1	Q9UP38	647 aa		18.76	■□□□□ 0.59
RNPS1-223	ENST00000568631		V9GY48	417 aa	Predicted RBP	18.76	■□□□□ 0.59
RNPS1-223	ENST00000568631	FRMPD2	Q68DX3	1309 aa	Predicted RBP	18.75	■□□□□ 0.59
RNPS1-223	ENST00000568631	NDUFB10	O96000	172 aa		18.75	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms