RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-223ENST00000568499 HMGCS2P54868 508 aa17.48■□□□□ 0.39
KLHDC4-223ENST00000568499 ZYXQ15942 572 aaKnown RBP17.48■□□□□ 0.39
KLHDC4-223ENST00000568499 CHST3Q7LGC8 479 aa17.48■□□□□ 0.39
KLHDC4-223ENST00000568499 CLEC10AQ8IUN9 316 aa17.48■□□□□ 0.39
KLHDC4-223ENST00000568499 ENAHQ8N8S7 591 aaPredicted RBP17.48■□□□□ 0.39
KLHDC4-223ENST00000568499 ANKS1AQ92625 1134 aa17.48■□□□□ 0.39
KLHDC4-223ENST00000568499 VCPKMTQ9H867 229 aa17.48■□□□□ 0.39
KLHDC4-223ENST00000568499 A0A1W2PRG0 241 aa17.47■□□□□ 0.39
KLHDC4-223ENST00000568499 RPS6KB1P23443 525 aa17.47■□□□□ 0.39
KLHDC4-223ENST00000568499 NOVP48745 357 aa17.47■□□□□ 0.39
KLHDC4-223ENST00000568499 RBM25P49756 843 aaKnown RBP17.47■□□□□ 0.39
KLHDC4-223ENST00000568499 SYNE3Q6ZMZ3 975 aa17.47■□□□□ 0.39
KLHDC4-223ENST00000568499 NFXL1Q6ZNB6 911 aa17.47■□□□□ 0.39
KLHDC4-223ENST00000568499 RUFY3Q7L099 469 aa17.47■□□□□ 0.39
KLHDC4-223ENST00000568499 SIAH1Q8IUQ4 282 aa17.47■□□□□ 0.39
KLHDC4-223ENST00000568499 GMCL1P1Q8NEA9 526 aa17.47■□□□□ 0.39
KLHDC4-223ENST00000568499 MS4A4AQ96JQ5 239 aa17.47■□□□□ 0.39
KLHDC4-223ENST00000568499 TMEM47Q9BQJ4 181 aa17.47■□□□□ 0.39
KLHDC4-223ENST00000568499 ZSWIM6Q9HCJ5 1215 aa17.47■□□□□ 0.39
KLHDC4-223ENST00000568499 ATAD5Q96QE3 1844 aa17.47■□□□□ 0.39
KLHDC4-223ENST00000568499 TESPA1A2RU30 521 aaPredicted RBP17.46■□□□□ 0.39
KLHDC4-223ENST00000568499 CCDC69A6NI79 296 aa17.46■□□□□ 0.39
KLHDC4-223ENST00000568499 F5H6K3 240 aa17.46■□□□□ 0.39
KLHDC4-223ENST00000568499 AOC2O75106 756 aa17.46■□□□□ 0.39
KLHDC4-223ENST00000568499 ALDH1A1P00352 501 aa17.46■□□□□ 0.39
KLHDC4-223ENST00000568499 TM4SF4P48230 202 aa17.46■□□□□ 0.39
KLHDC4-223ENST00000568499 KLRC3Q07444 240 aa17.46■□□□□ 0.39
KLHDC4-223ENST00000568499 CATIPQ7Z7H3 387 aa17.46■□□□□ 0.39
KLHDC4-223ENST00000568499 LRRC47Q8N1G4 583 aaKnown RBP17.46■□□□□ 0.39
KLHDC4-223ENST00000568499 IL27Q8NEV9 243 aa17.46■□□□□ 0.39
KLHDC4-223ENST00000568499 C12orf42Q96LP6 360 aa17.46■□□□□ 0.39
KLHDC4-223ENST00000568499 OSBPP22059 807 aa17.45■□□□□ 0.38
KLHDC4-223ENST00000568499 LIFRP42702 1097 aa17.45■□□□□ 0.38
KLHDC4-223ENST00000568499 ANTXR2P58335 489 aa17.45■□□□□ 0.38
KLHDC4-223ENST00000568499 EXOSC10Q01780 885 aaKnown RBP17.45■□□□□ 0.38
KLHDC4-223ENST00000568499 SEC23AQ15436 765 aa17.45■□□□□ 0.38
KLHDC4-223ENST00000568499 SLFN13Q68D06 897 aa17.45■□□□□ 0.38
KLHDC4-223ENST00000568499 ANKRD23Q86SG2 305 aa17.45■□□□□ 0.38
KLHDC4-223ENST00000568499 PNMA1Q8ND90 353 aa17.45■□□□□ 0.38
KLHDC4-223ENST00000568499 IGDCC4Q8TDY8 1250 aa17.45■□□□□ 0.38
KLHDC4-223ENST00000568499 BRI3BPQ8WY22 251 aa17.45■□□□□ 0.38
KLHDC4-223ENST00000568499 IL17RAQ96F46 866 aa17.45■□□□□ 0.38
KLHDC4-223ENST00000568499 ZCCHC17Q9NP64 241 aaKnown RBP17.45■□□□□ 0.38
KLHDC4-223ENST00000568499 EMILIN3Q9NT22 766 aa17.45■□□□□ 0.38
KLHDC4-223ENST00000568499 PDRG1Q9NUG6 133 aa17.45■□□□□ 0.38
KLHDC4-223ENST00000568499 PNMA3Q9UL41 463 aa17.45■□□□□ 0.38
KLHDC4-223ENST00000568499 ISY1Q9ULR0 285 aaKnown RBP17.45■□□□□ 0.38
KLHDC4-223ENST00000568499 AGTPBP1Q9UPW5 1226 aa17.45■□□□□ 0.38
KLHDC4-223ENST00000568499 USP17L15C9J2P7 530 aa17.44■□□□□ 0.38
KLHDC4-223ENST00000568499 USP17L13C9JLJ4 530 aa17.44■□□□□ 0.38
KLHDC4-223ENST00000568499 USP17L11C9JVI0 530 aa17.44■□□□□ 0.38
KLHDC4-223ENST00000568499 USP17L18D6R9N7 530 aa17.44■□□□□ 0.38
KLHDC4-223ENST00000568499 USP17L22D6RA61 530 aa17.44■□□□□ 0.38
KLHDC4-223ENST00000568499 USP17L17D6RBQ6 530 aa17.44■□□□□ 0.38
KLHDC4-223ENST00000568499 USP17L19D6RCP7 530 aa17.44■□□□□ 0.38
KLHDC4-223ENST00000568499 USP17L20D6RJB6 530 aa17.44■□□□□ 0.38
KLHDC4-223ENST00000568499 SH2B2O14492 632 aaPredicted RBP17.44■□□□□ 0.38
KLHDC4-223ENST00000568499 WDR46O15213 610 aaKnown RBP17.44■□□□□ 0.38
KLHDC4-223ENST00000568499 SLC1A4P43007 532 aa17.44■□□□□ 0.38
KLHDC4-223ENST00000568499 MAP2K1Q02750 393 aaPredicted RBP17.44■□□□□ 0.38
KLHDC4-223ENST00000568499 USP17L24Q0WX57 530 aa17.44■□□□□ 0.38
KLHDC4-223ENST00000568499 RCSD1Q6JBY9 416 aa17.44■□□□□ 0.38
KLHDC4-223ENST00000568499 NKX2-3Q8TAU0 364 aa17.44■□□□□ 0.38
KLHDC4-223ENST00000568499 DCAF4Q8WV16 495 aa17.44■□□□□ 0.38
KLHDC4-223ENST00000568499 TBC1D32Q96NH3 1257 aa17.44■□□□□ 0.38
KLHDC4-223ENST00000568499 BEGAINQ9BUH8 593 aa17.44■□□□□ 0.38
KLHDC4-223ENST00000568499 SLC45A1Q9Y2W3 748 aa17.44■□□□□ 0.38
KLHDC4-223ENST00000568499 NDUFB10O96000 172 aa17.43■□□□□ 0.38
KLHDC4-223ENST00000568499 VCAM1P19320 739 aa17.43■□□□□ 0.38
KLHDC4-223ENST00000568499 IRX3P78415 501 aaPredicted RBP17.43■□□□□ 0.38
KLHDC4-223ENST00000568499 ANKRD1Q15327 319 aa17.43■□□□□ 0.38
KLHDC4-223ENST00000568499 Q6ZUG5 572 aa17.43■□□□□ 0.38
KLHDC4-223ENST00000568499 IFNL1Q8IU54 200 aa17.43■□□□□ 0.38
KLHDC4-223ENST00000568499 SPICE1Q8N0Z3 855 aa17.43■□□□□ 0.38
KLHDC4-223ENST00000568499 GMCL1Q96IK5 515 aa17.43■□□□□ 0.38
KLHDC4-223ENST00000568499 LRRC2Q9BYS8 371 aa17.43■□□□□ 0.38
KLHDC4-223ENST00000568499 UPF3BQ9BZI7 483 aaKnown RBP17.43■□□□□ 0.38
KLHDC4-223ENST00000568499 TANGO6Q9C0B7 1094 aa17.43■□□□□ 0.38
KLHDC4-223ENST00000568499 LY9Q9HBG7 655 aa17.43■□□□□ 0.38
KLHDC4-223ENST00000568499 MTMR7Q9Y216 660 aa17.43■□□□□ 0.38
KLHDC4-223ENST00000568499 SLC12A7Q9Y666 1083 aa17.43■□□□□ 0.38
KLHDC4-223ENST00000568499 GREB1LQ9C091 1923 aaPredicted RBP17.43■□□□□ 0.38
KLHDC4-223ENST00000568499 BTBD19C9JJ37 291 aa17.42■□□□□ 0.38
KLHDC4-223ENST00000568499 PDHXO00330 501 aa17.42■□□□□ 0.38
KLHDC4-223ENST00000568499 CALM1P0DP23 149 aa17.42■□□□□ 0.38
KLHDC4-223ENST00000568499 CALM2P0DP24 149 aa17.42■□□□□ 0.38
KLHDC4-223ENST00000568499 CALM3P0DP25 149 aa17.42■□□□□ 0.38
KLHDC4-223ENST00000568499 BMP3P12645 472 aa17.42■□□□□ 0.38
KLHDC4-223ENST00000568499 CPA1P15085 419 aa17.42■□□□□ 0.38
KLHDC4-223ENST00000568499 HOXA7P31268 230 aaPredicted RBP17.42■□□□□ 0.38
KLHDC4-223ENST00000568499 CCDC96Q2M329 555 aa17.42■□□□□ 0.38
KLHDC4-223ENST00000568499 FBXL16Q8N461 479 aa17.42■□□□□ 0.38
KLHDC4-223ENST00000568499 TCEANC2Q96MN5 208 aa17.42■□□□□ 0.38
KLHDC4-223ENST00000568499 RPAP3Q9H6T3 665 aaPredicted RBP17.42■□□□□ 0.38
KLHDC4-223ENST00000568499 DDAH1O94760 285 aa17.41■□□□□ 0.38
KLHDC4-223ENST00000568499 NEK4P51957 841 aa17.41■□□□□ 0.38
KLHDC4-223ENST00000568499 IKQ13123 557 aaPredicted RBP17.41■□□□□ 0.38
KLHDC4-223ENST00000568499 MOGSQ13724 837 aa17.41■□□□□ 0.38
KLHDC4-223ENST00000568499 RABEP1Q15276 862 aa17.41■□□□□ 0.38
KLHDC4-223ENST00000568499 GPATCH4Q5T3I0 446 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms