RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 KRT31Q15323 416 aa10.14□□□□□ -0.79
HDGFL3-206ENST00000568294 DYNLL2Q96FJ2 89 aa10.14□□□□□ -0.79
HDGFL3-206ENST00000568294 TRIM47Q96LD4 638 aa10.14□□□□□ -0.79
HDGFL3-206ENST00000568294 ZSCAN10Q96SZ4 725 aaPredicted RBP10.14□□□□□ -0.79
HDGFL3-206ENST00000568294 CARD10Q9BWT7 1032 aa10.14□□□□□ -0.79
HDGFL3-206ENST00000568294 RNF41Q9H4P4 317 aaPredicted RBP10.14□□□□□ -0.79
HDGFL3-206ENST00000568294 SAP30BPQ9UHR5 308 aaKnown RBP10.14□□□□□ -0.79
HDGFL3-206ENST00000568294 ADGRG1Q9Y653 693 aa10.14□□□□□ -0.79
HDGFL3-206ENST00000568294 MST1RQ04912 1400 aa10.14□□□□□ -0.79
HDGFL3-206ENST00000568294 KLK7P49862 253 aa10.14□□□□□ -0.79
HDGFL3-206ENST00000568294 DNAJC21Q5F1R6 531 aaKnown RBP10.14□□□□□ -0.79
HDGFL3-206ENST00000568294 KIAA1328Q86T90 577 aa10.14□□□□□ -0.79
HDGFL3-206ENST00000568294 NOA1Q8NC60 698 aaKnown RBP10.14□□□□□ -0.79
HDGFL3-206ENST00000568294 ABCB6Q9NP58 842 aa10.14□□□□□ -0.79
HDGFL3-206ENST00000568294 SLAIN2Q9P270 581 aa10.14□□□□□ -0.79
HDGFL3-206ENST00000568294 CHD2O14647 1828 aaKnown RBP10.13□□□□□ -0.79
HDGFL3-206ENST00000568294 ARFGEF2Q9Y6D5 1785 aa10.13□□□□□ -0.79
HDGFL3-206ENST00000568294 GYPCP04921 128 aa10.13□□□□□ -0.79
HDGFL3-206ENST00000568294 CYP27A1Q02318 531 aa10.13□□□□□ -0.79
HDGFL3-206ENST00000568294 PTPROQ16827 1216 aa10.13□□□□□ -0.79
HDGFL3-206ENST00000568294 CCDC152Q4G0S7 254 aa10.13□□□□□ -0.79
HDGFL3-206ENST00000568294 ANKRD20A12PQ8NF67 263 aa10.13□□□□□ -0.79
HDGFL3-206ENST00000568294 KIFC2Q96AC6 838 aa10.13□□□□□ -0.79
HDGFL3-206ENST00000568294 FOXP1Q9H334 677 aaPredicted RBP10.13□□□□□ -0.79
HDGFL3-206ENST00000568294 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.13□□□□□ -0.79
HDGFL3-206ENST00000568294 MCM9Q9NXL9 1143 aa10.13□□□□□ -0.79
HDGFL3-206ENST00000568294 FAN1Q9Y2M0 1017 aa10.13□□□□□ -0.79
HDGFL3-206ENST00000568294 ARID4AP29374 1257 aaPredicted RBP10.13□□□□□ -0.79
HDGFL3-206ENST00000568294 PRDX5P30044 214 aa10.13□□□□□ -0.79
HDGFL3-206ENST00000568294 MAP3K9P80192 1104 aa10.13□□□□□ -0.79
HDGFL3-206ENST00000568294 SPATA1Q5VX52 437 aa10.13□□□□□ -0.79
HDGFL3-206ENST00000568294 SLC44A5Q8NCS7 719 aa10.13□□□□□ -0.79
HDGFL3-206ENST00000568294 RIN2Q8WYP3 895 aaPredicted RBP10.13□□□□□ -0.79
HDGFL3-206ENST00000568294 ABCC6O95255 1503 aa10.13□□□□□ -0.79
HDGFL3-206ENST00000568294 KCNJ18B7U540 433 aa10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 MFAP3LO75121 409 aa10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 ZNF18P17022 549 aa10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 CAPN2P17655 700 aa10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 NAP1L1P55209 391 aaKnown RBP10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 VSNL1P62760 191 aa10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 IRX5P78411 483 aaPredicted RBP10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 KCNJ12Q14500 433 aa10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 NR1I3Q14994 352 aa10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 INF2Q27J81 1249 aa10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 TSR1Q2NL82 804 aaKnown RBP10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 FAM182BQ5T319 152 aa10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 SRBD1Q8N5C6 995 aaKnown RBP10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 SRRTQ9BXP5 876 aaKnown RBP10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 CTAGE15A4D2H0 777 aa10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 TRIM66O15016 1216 aa10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 USP17L8P0C7I0 530 aa10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 CTAGE8P0CG41 777 aa10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 CRKLP46109 303 aaKnown RBP10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 ERVK-24P63145 666 aa10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 GPS2Q13227 327 aa10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 CTAGE6Q86UF2 777 aa10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 CTAGE4Q8IX94 777 aa10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 PLCD3Q8N3E9 789 aa10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 ANKRD13CQ8N6S4 541 aa10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 GPR161Q8N6U8 529 aaKnown RBP10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 STAG1Q8WVM7 1258 aa10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 MROH5Q6ZUA9 1318 aa10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 ZNF335Q9H4Z2 1342 aaPredicted RBP10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 ABCC12Q96J65 1359 aa10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 TXLNAP40222 546 aa10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 PAK1Q13153 545 aa10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 HSP90B2PQ58FF3 399 aa10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 TTC19Q6DKK2 380 aaPredicted RBP10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 JADE2Q9NQC1 790 aa10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 SMARCAL1Q9NZC9 954 aa10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 CALCOCO1Q9P1Z2 691 aa10.12□□□□□ -0.79
HDGFL3-206ENST00000568294 CAMTA1Q9Y6Y1 1673 aa10.11□□□□□ -0.79
HDGFL3-206ENST00000568294 XDHP47989 1333 aa10.11□□□□□ -0.79
HDGFL3-206ENST00000568294 CCDC194A0A1B0GVG4 234 aa10.11□□□□□ -0.79
HDGFL3-206ENST00000568294 USP17L3A6NCW0 530 aa10.11□□□□□ -0.79
HDGFL3-206ENST00000568294 USP17L4A6NCW7 530 aa10.11□□□□□ -0.79
HDGFL3-206ENST00000568294 B4DLN1 442 aa10.11□□□□□ -0.79
HDGFL3-206ENST00000568294 ZRANB2O95218 330 aaKnown RBP eCLIP10.11□□□□□ -0.79
HDGFL3-206ENST00000568294 TRIM21P19474 475 aaKnown RBP10.11□□□□□ -0.79
HDGFL3-206ENST00000568294 EIF6P56537 245 aaKnown RBP10.11□□□□□ -0.79
HDGFL3-206ENST00000568294 PKN1Q16512 942 aa10.11□□□□□ -0.79
HDGFL3-206ENST00000568294 ERFEQ4G0M1 354 aa10.11□□□□□ -0.79
HDGFL3-206ENST00000568294 CAVIN4Q5BKX8 364 aa10.11□□□□□ -0.79
HDGFL3-206ENST00000568294 USP17L1Q7RTZ2 530 aa10.11□□□□□ -0.79
HDGFL3-206ENST00000568294 STAG2Q8N3U4 1231 aa10.11□□□□□ -0.79
HDGFL3-206ENST00000568294 SMCR8Q8TEV9 937 aaPredicted RBP10.11□□□□□ -0.79
HDGFL3-206ENST00000568294 GNL3LQ9NVN8 582 aaKnown RBP10.11□□□□□ -0.79
HDGFL3-206ENST00000568294 A0A1B0GTH6 734 aa10.11□□□□□ -0.79
HDGFL3-206ENST00000568294 SSBP05455 408 aaKnown RBP eCLIP10.11□□□□□ -0.79
HDGFL3-206ENST00000568294 CYP2C19P33261 490 aa10.11□□□□□ -0.79
HDGFL3-206ENST00000568294 USP5P45974 858 aa10.11□□□□□ -0.79
HDGFL3-206ENST00000568294 COPB1P53618 953 aaKnown RBP10.11□□□□□ -0.79
HDGFL3-206ENST00000568294 RNASE9P60153 205 aaKnown RBP10.11□□□□□ -0.79
HDGFL3-206ENST00000568294 TBX2Q13207 712 aaPredicted RBP10.11□□□□□ -0.79
HDGFL3-206ENST00000568294 ZSCAN26Q16670 478 aa10.11□□□□□ -0.79
HDGFL3-206ENST00000568294 CCDC122Q5T0U0 273 aa10.11□□□□□ -0.79
HDGFL3-206ENST00000568294 ANKRD18AQ8IVF6 992 aa10.11□□□□□ -0.79
HDGFL3-206ENST00000568294 IQUBQ8NA54 791 aa10.11□□□□□ -0.79
HDGFL3-206ENST00000568294 CELF1Q92879 486 aaKnown RBP10.11□□□□□ -0.79
HDGFL3-206ENST00000568294 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms