RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 USP17L20D6RJB6 530 aa15.42■□□□□ 0.06
CNOT1-213ENST00000568158 ORC4O43929 436 aa15.42■□□□□ 0.06
CNOT1-213ENST00000568158 VCAM1P19320 739 aa15.42■□□□□ 0.06
CNOT1-213ENST00000568158 CTGFP29279 349 aa15.42■□□□□ 0.06
CNOT1-213ENST00000568158 IRX3P78415 501 aaPredicted RBP15.42■□□□□ 0.06
CNOT1-213ENST00000568158 USP17L24Q0WX57 530 aa15.42■□□□□ 0.06
CNOT1-213ENST00000568158 AKNAD1Q5T1N1 836 aa15.42■□□□□ 0.06
CNOT1-213ENST00000568158 MFSD6Q6ZSS7 791 aa15.42■□□□□ 0.06
CNOT1-213ENST00000568158 TBC1D10CQ8IV04 446 aa15.42■□□□□ 0.06
CNOT1-213ENST00000568158 SPICE1Q8N0Z3 855 aa15.42■□□□□ 0.06
CNOT1-213ENST00000568158 ANKRD13CQ8N6S4 541 aa15.42■□□□□ 0.06
CNOT1-213ENST00000568158 SMCR8Q8TEV9 937 aaPredicted RBP15.42■□□□□ 0.06
CNOT1-213ENST00000568158 CEP95Q96GE4 821 aa15.42■□□□□ 0.06
CNOT1-213ENST00000568158 ERO1AQ96HE7 468 aa15.42■□□□□ 0.06
CNOT1-213ENST00000568158 MCOLN1Q9GZU1 580 aa15.42■□□□□ 0.06
CNOT1-213ENST00000568158 RPAP3Q9H6T3 665 aaPredicted RBP15.42■□□□□ 0.06
CNOT1-213ENST00000568158 VCPKMTQ9H867 229 aa15.42■□□□□ 0.06
CNOT1-213ENST00000568158 IL17RBQ9NRM6 502 aa15.42■□□□□ 0.06
CNOT1-213ENST00000568158 MTMR4Q9NYA4 1195 aa15.42■□□□□ 0.06
CNOT1-213ENST00000568158 CTNNA3Q9UI47 895 aa15.42■□□□□ 0.06
CNOT1-213ENST00000568158 RAD50Q92878 1312 aa15.42■□□□□ 0.06
CNOT1-213ENST00000568158 RAD21O60216 631 aa15.41■□□□□ 0.06
CNOT1-213ENST00000568158 NMT2O60551 498 aa15.41■□□□□ 0.06
CNOT1-213ENST00000568158 POTEEQ6S8J3 1075 aa15.41■□□□□ 0.06
CNOT1-213ENST00000568158 CHRDL2Q6WN34 429 aa15.41■□□□□ 0.06
CNOT1-213ENST00000568158 STAG1Q8WVM7 1258 aa15.41■□□□□ 0.06
CNOT1-213ENST00000568158 ESYT1Q9BSJ8 1104 aa15.41■□□□□ 0.06
CNOT1-213ENST00000568158 TRIM17Q9Y577 477 aa15.41■□□□□ 0.06
CNOT1-213ENST00000568158 HERVK_113P62684 666 aa15.4■□□□□ 0.06
CNOT1-213ENST00000568158 LACTBP83111 547 aaPredicted RBP15.4■□□□□ 0.06
CNOT1-213ENST00000568158 IMMTQ16891 758 aaKnown RBP15.4■□□□□ 0.06
CNOT1-213ENST00000568158 Q3C1V9 767 aa15.4■□□□□ 0.06
CNOT1-213ENST00000568158 OTOP1Q7RTM1 612 aa15.4■□□□□ 0.06
CNOT1-213ENST00000568158 MKL1Q969V6 931 aa15.4■□□□□ 0.06
CNOT1-213ENST00000568158 SH2D4AQ9H788 454 aa15.4■□□□□ 0.06
CNOT1-213ENST00000568158 EFCC1Q9HA90 598 aa15.4■□□□□ 0.06
CNOT1-213ENST00000568158 RBPJLQ9UBG7 517 aa15.4■□□□□ 0.06
CNOT1-213ENST00000568158 GREB1LQ9C091 1923 aaPredicted RBP15.4■□□□□ 0.06
CNOT1-213ENST00000568158 F5H6K3 240 aa15.39■□□□□ 0.05
CNOT1-213ENST00000568158 TTLL1O95922 423 aa15.39■□□□□ 0.05
CNOT1-213ENST00000568158 PSMC4P43686 418 aa15.39■□□□□ 0.05
CNOT1-213ENST00000568158 GCLCP48506 637 aaPredicted RBP15.39■□□□□ 0.05
CNOT1-213ENST00000568158 KLRC3Q07444 240 aa15.39■□□□□ 0.05
CNOT1-213ENST00000568158 KIF22Q14807 665 aa15.39■□□□□ 0.05
CNOT1-213ENST00000568158 MAP4K1Q92918 833 aa15.39■□□□□ 0.05
CNOT1-213ENST00000568158 CHMP4CQ96CF2 233 aa15.39■□□□□ 0.05
CNOT1-213ENST00000568158 TXNRD2Q9NNW7 524 aa15.39■□□□□ 0.05
CNOT1-213ENST00000568158 ZSWIM8A7E2V4 1837 aa15.38■□□□□ 0.05
CNOT1-213ENST00000568158 FMNL1O95466 1100 aaPredicted RBP15.38■□□□□ 0.05
CNOT1-213ENST00000568158 COG2Q14746 738 aa15.38■□□□□ 0.05
CNOT1-213ENST00000568158 SAMD1Q6SPF0 538 aaPredicted RBP15.38■□□□□ 0.05
CNOT1-213ENST00000568158 KIAA1211Q6ZU35 1233 aa15.38■□□□□ 0.05
CNOT1-213ENST00000568158 LRRC47Q8N1G4 583 aaKnown RBP15.38■□□□□ 0.05
CNOT1-213ENST00000568158 LPAR1Q92633 364 aa15.38■□□□□ 0.05
CNOT1-213ENST00000568158 NUP88Q99567 741 aaPredicted RBP15.38■□□□□ 0.05
CNOT1-213ENST00000568158 TANGO6Q9C0B7 1094 aa15.38■□□□□ 0.05
CNOT1-213ENST00000568158 LSG1Q9H089 658 aaKnown RBP15.38■□□□□ 0.05
CNOT1-213ENST00000568158 RNF41Q9H4P4 317 aaPredicted RBP15.38■□□□□ 0.05
CNOT1-213ENST00000568158 GOPCQ9HD26 462 aa15.38■□□□□ 0.05
CNOT1-213ENST00000568158 MYH4Q9Y623 1939 aa15.38■□□□□ 0.05
CNOT1-213ENST00000568158 NEDD4P46934 1319 aa15.38■□□□□ 0.05
CNOT1-213ENST00000568158 B4E1Z4 1266 aa15.37■□□□□ 0.05
CNOT1-213ENST00000568158 CDC45O75419 566 aa15.37■□□□□ 0.05
CNOT1-213ENST00000568158 CYP21A2P08686 494 aa15.37■□□□□ 0.05
CNOT1-213ENST00000568158 PCP11498 1178 aaKnown RBP15.37■□□□□ 0.05
CNOT1-213ENST00000568158 FAM83BQ5T0W9 1011 aa15.37■□□□□ 0.05
CNOT1-213ENST00000568158 TRIM47Q96LD4 638 aa15.37■□□□□ 0.05
CNOT1-213ENST00000568158 ZKSCAN3Q9BRR0 538 aa15.37■□□□□ 0.05
CNOT1-213ENST00000568158 PAGR1Q9BTK6 254 aa15.37■□□□□ 0.05
CNOT1-213ENST00000568158 TCP11L1Q9NUJ3 509 aa15.37■□□□□ 0.05
CNOT1-213ENST00000568158 FBXO28Q9NVF7 368 aa15.37■□□□□ 0.05
CNOT1-213ENST00000568158 HOXC10Q9NYD6 342 aa15.37■□□□□ 0.05
CNOT1-213ENST00000568158 ZSWIM5Q9P217 1185 aa15.37■□□□□ 0.05
CNOT1-213ENST00000568158 STX8Q9UNK0 236 aa15.37■□□□□ 0.05
CNOT1-213ENST00000568158 PTPN22Q9Y2R2 807 aa15.37■□□□□ 0.05
CNOT1-213ENST00000568158 RBM8AQ9Y5S9 174 aaKnown RBP15.37■□□□□ 0.05
CNOT1-213ENST00000568158 TAF6LQ9Y6J9 622 aa15.37■□□□□ 0.05
CNOT1-213ENST00000568158 PLIN4Q96Q06 1357 aa15.36■□□□□ 0.05
CNOT1-213ENST00000568158 DOCK3Q8IZD9 2030 aa15.36■□□□□ 0.05
CNOT1-213ENST00000568158 SPDYE16A6NNV3 312 aaPredicted RBP15.36■□□□□ 0.05
CNOT1-213ENST00000568158 WDR46O15213 610 aaKnown RBP15.36■□□□□ 0.05
CNOT1-213ENST00000568158 KDM4AO75164 1064 aa15.36■□□□□ 0.05
CNOT1-213ENST00000568158 CNMDO75829 334 aa15.36■□□□□ 0.05
CNOT1-213ENST00000568158 NDUFB10O96000 172 aa15.36■□□□□ 0.05
CNOT1-213ENST00000568158 NOVP48745 357 aa15.36■□□□□ 0.05
CNOT1-213ENST00000568158 ARHGEF6Q15052 776 aa15.36■□□□□ 0.05
CNOT1-213ENST00000568158 PKN2Q16513 984 aaKnown RBP15.36■□□□□ 0.05
CNOT1-213ENST00000568158 FAM110CQ1W6H9 321 aa15.36■□□□□ 0.05
CNOT1-213ENST00000568158 SLFN13Q68D06 897 aa15.36■□□□□ 0.05
CNOT1-213ENST00000568158 ESR2Q92731 530 aa15.36■□□□□ 0.05
CNOT1-213ENST00000568158 BTBD7Q9P203 1132 aa15.36■□□□□ 0.05
CNOT1-213ENST00000568158 MORF4L1Q9UBU8 362 aa15.36■□□□□ 0.05
CNOT1-213ENST00000568158 FLOT1O75955 427 aa15.35■□□□□ 0.05
CNOT1-213ENST00000568158 FBXO46Q6PJ61 603 aaPredicted RBP15.35■□□□□ 0.05
CNOT1-213ENST00000568158 GPRC5AQ8NFJ5 357 aa15.35■□□□□ 0.05
CNOT1-213ENST00000568158 ABHD8Q96I13 439 aa15.35■□□□□ 0.05
CNOT1-213ENST00000568158 TMEM47Q9BQJ4 181 aa15.35■□□□□ 0.05
CNOT1-213ENST00000568158 ANO2Q9NQ90 1003 aa15.35■□□□□ 0.05
CNOT1-213ENST00000568158 GABRQQ9UN88 632 aa15.35■□□□□ 0.05
CNOT1-213ENST00000568158 MTMR7Q9Y216 660 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms