RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 ZBBXA8MT70 800 aa12.07□□□□□ -0.48
CAPN3-216ENST00000567071 USP17L15C9J2P7 530 aa12.07□□□□□ -0.48
CAPN3-216ENST00000567071 USP17L13C9JLJ4 530 aa12.07□□□□□ -0.48
CAPN3-216ENST00000567071 USP17L11C9JVI0 530 aa12.07□□□□□ -0.48
CAPN3-216ENST00000567071 USP17L18D6R9N7 530 aa12.07□□□□□ -0.48
CAPN3-216ENST00000567071 USP17L22D6RA61 530 aa12.07□□□□□ -0.48
CAPN3-216ENST00000567071 USP17L17D6RBQ6 530 aa12.07□□□□□ -0.48
CAPN3-216ENST00000567071 USP17L19D6RCP7 530 aa12.07□□□□□ -0.48
CAPN3-216ENST00000567071 USP17L20D6RJB6 530 aa12.07□□□□□ -0.48
CAPN3-216ENST00000567071 GRM8O00222 908 aa12.07□□□□□ -0.48
CAPN3-216ENST00000567071 RFXAPO00287 272 aa12.07□□□□□ -0.48
CAPN3-216ENST00000567071 PGK1P00558 417 aa12.07□□□□□ -0.48
CAPN3-216ENST00000567071 USP17L24Q0WX57 530 aa12.07□□□□□ -0.48
CAPN3-216ENST00000567071 TMEM67Q5HYA8 995 aa12.07□□□□□ -0.48
CAPN3-216ENST00000567071 USP17L2Q6R6M4 530 aa12.07□□□□□ -0.48
CAPN3-216ENST00000567071 OTOP2Q7RTS6 562 aa12.07□□□□□ -0.48
CAPN3-216ENST00000567071 TRIM34Q9BYJ4 488 aa12.07□□□□□ -0.48
CAPN3-216ENST00000567071 NRBP1Q9UHY1 535 aa12.07□□□□□ -0.48
CAPN3-216ENST00000567071 C5orf42Q9H799 3197 aa12.07□□□□□ -0.48
CAPN3-216ENST00000567071 GAKO14976 1311 aa12.07□□□□□ -0.48
CAPN3-216ENST00000567071 EPG5Q9HCE0 2579 aa12.07□□□□□ -0.48
CAPN3-216ENST00000567071 MOXD2PA6NHM9 499 aa12.06□□□□□ -0.48
CAPN3-216ENST00000567071 CNMDO75829 334 aa12.06□□□□□ -0.48
CAPN3-216ENST00000567071 IGHA2P01877 340 aa12.06□□□□□ -0.48
CAPN3-216ENST00000567071 ATP2A2P16615 1042 aaKnown RBP12.06□□□□□ -0.48
CAPN3-216ENST00000567071 BTDP43251 543 aa12.06□□□□□ -0.48
CAPN3-216ENST00000567071 ACLYP53396 1101 aa12.06□□□□□ -0.48
CAPN3-216ENST00000567071 WDR43Q15061 677 aaKnown RBP eCLIP12.06□□□□□ -0.48
CAPN3-216ENST00000567071 PRAMEF19Q5SWL8 479 aa12.06□□□□□ -0.48
CAPN3-216ENST00000567071 HFE2Q6ZVN8 426 aa12.06□□□□□ -0.48
CAPN3-216ENST00000567071 VTI1AQ96AJ9 217 aa12.06□□□□□ -0.48
CAPN3-216ENST00000567071 GLT1D1Q96MS3 346 aa12.06□□□□□ -0.48
CAPN3-216ENST00000567071 CERS4Q9HA82 394 aa12.06□□□□□ -0.48
CAPN3-216ENST00000567071 GINM1Q9NU53 330 aa12.06□□□□□ -0.48
CAPN3-216ENST00000567071 ZNF536O15090 1300 aa12.06□□□□□ -0.48
CAPN3-216ENST00000567071 SALL1Q9NSC2 1324 aa12.06□□□□□ -0.48
CAPN3-216ENST00000567071 RIF1Q5UIP0 2472 aaKnown RBP12.05□□□□□ -0.48
CAPN3-216ENST00000567071 CACNA1FO60840 1977 aa12.05□□□□□ -0.48
CAPN3-216ENST00000567071 MYOGP15173 224 aa12.05□□□□□ -0.48
CAPN3-216ENST00000567071 MKRN4PQ13434 485 aaPredicted RBP12.05□□□□□ -0.48
CAPN3-216ENST00000567071 LRRC24Q50LG9 513 aa12.05□□□□□ -0.48
CAPN3-216ENST00000567071 KRT40Q6A162 431 aa12.05□□□□□ -0.48
CAPN3-216ENST00000567071 FAM9BQ8IZU0 186 aa12.05□□□□□ -0.48
CAPN3-216ENST00000567071 TSPYL6Q8N831 410 aa12.05□□□□□ -0.48
CAPN3-216ENST00000567071 VGLL2Q8N8G2 317 aa12.05□□□□□ -0.48
CAPN3-216ENST00000567071 ARNTL2Q8WYA1 636 aa12.05□□□□□ -0.48
CAPN3-216ENST00000567071 FEZ1Q99689 392 aa12.05□□□□□ -0.48
CAPN3-216ENST00000567071 UPF3BQ9BZI7 483 aaKnown RBP12.05□□□□□ -0.48
CAPN3-216ENST00000567071 IRF2BPLQ9H1B7 796 aa12.05□□□□□ -0.48
CAPN3-216ENST00000567071 UBE2ZQ9H832 354 aaPredicted RBP12.05□□□□□ -0.48
CAPN3-216ENST00000567071 DENND2AQ9ULE3 1009 aa12.05□□□□□ -0.48
CAPN3-216ENST00000567071 CACNA1HO95180 2353 aa12.05□□□□□ -0.48
CAPN3-216ENST00000567071 MAP4K4O95819 1239 aaPredicted RBP12.04□□□□□ -0.48
CAPN3-216ENST00000567071 CA3P07451 260 aa12.04□□□□□ -0.48
CAPN3-216ENST00000567071 PUS10Q3MIT2 529 aaKnown RBP12.04□□□□□ -0.48
CAPN3-216ENST00000567071 RPUSD2Q8IZ73 545 aaKnown RBP12.04□□□□□ -0.48
CAPN3-216ENST00000567071 PRSS33Q8NF86 280 aa12.04□□□□□ -0.48
CAPN3-216ENST00000567071 LPIN2Q92539 896 aa12.04□□□□□ -0.48
CAPN3-216ENST00000567071 FAM50BQ9Y247 325 aa12.04□□□□□ -0.48
CAPN3-216ENST00000567071 ELP1O95163 1332 aa12.04□□□□□ -0.48
CAPN3-216ENST00000567071 FAM186AA6NE01 2351 aa12.03□□□□□ -0.48
CAPN3-216ENST00000567071 POTEB3A0JP26 581 aa12.03□□□□□ -0.48
CAPN3-216ENST00000567071 SEMA3EO15041 775 aa12.03□□□□□ -0.48
CAPN3-216ENST00000567071 AKR1A1P14550 325 aa12.03□□□□□ -0.48
CAPN3-216ENST00000567071 CYP2C18P33260 490 aa12.03□□□□□ -0.48
CAPN3-216ENST00000567071 PKN1Q16512 942 aa12.03□□□□□ -0.48
CAPN3-216ENST00000567071 LEXMQ3ZCV2 418 aa12.03□□□□□ -0.48
CAPN3-216ENST00000567071 SPTY2D1Q68D10 685 aaPredicted RBP12.03□□□□□ -0.48
CAPN3-216ENST00000567071 PTCRAQ6ISU1 281 aaPredicted RBP12.03□□□□□ -0.48
CAPN3-216ENST00000567071 POTEBQ6S5H4 581 aa12.03□□□□□ -0.48
CAPN3-216ENST00000567071 LBX2Q6XYB7 198 aa12.03□□□□□ -0.48
CAPN3-216ENST00000567071 FAM163AQ96GL9 167 aaPredicted RBP12.03□□□□□ -0.48
CAPN3-216ENST00000567071 YTHDC1Q96MU7 727 aaKnown RBP12.03□□□□□ -0.48
CAPN3-216ENST00000567071 EMILIN3Q9NT22 766 aa12.03□□□□□ -0.48
CAPN3-216ENST00000567071 MROH7-TTC4A0A0A0MT08 1334 aa12.03□□□□□ -0.48
CAPN3-216ENST00000567071 A0A0U1RQG5 324 aaPredicted RBP12.02□□□□□ -0.49
CAPN3-216ENST00000567071 KIF28PB7ZC32 967 aa12.02□□□□□ -0.49
CAPN3-216ENST00000567071 FGFR2P21802 821 aa12.02□□□□□ -0.49
CAPN3-216ENST00000567071 KCNA5P22460 613 aa12.02□□□□□ -0.49
CAPN3-216ENST00000567071 USP14P54578 494 aa12.02□□□□□ -0.49
CAPN3-216ENST00000567071 RRP1BQ14684 758 aaKnown RBP12.02□□□□□ -0.49
CAPN3-216ENST00000567071 BEND3Q5T5X7 828 aa12.02□□□□□ -0.49
CAPN3-216ENST00000567071 CRACR2BQ8N4Y2 399 aaPredicted RBP12.02□□□□□ -0.49
CAPN3-216ENST00000567071 MAML3Q96JK9 1138 aa12.02□□□□□ -0.49
CAPN3-216ENST00000567071 HIPK3Q9H422 1215 aa12.02□□□□□ -0.49
CAPN3-216ENST00000567071 LMCD1Q9NZU5 365 aa12.02□□□□□ -0.49
CAPN3-216ENST00000567071 BTBD7Q9P203 1132 aa12.02□□□□□ -0.49
CAPN3-216ENST00000567071 PI4KBQ9UBF8 816 aa12.02□□□□□ -0.49
CAPN3-216ENST00000567071 ABCF2Q9UG63 623 aa12.02□□□□□ -0.49
CAPN3-216ENST00000567071 ROBO3Q96MS0 1386 aa12.02□□□□□ -0.49
CAPN3-216ENST00000567071 PKD1L2Q7Z442 2459 aa12.01□□□□□ -0.49
CAPN3-216ENST00000567071 BAHCC1Q9P281 2608 aa12.01□□□□□ -0.49
CAPN3-216ENST00000567071 ARVCFO00192 962 aa12.01□□□□□ -0.49
CAPN3-216ENST00000567071 COBLO75128 1261 aa12.01□□□□□ -0.49
CAPN3-216ENST00000567071 IL9P15248 144 aa12.01□□□□□ -0.49
CAPN3-216ENST00000567071 ID4P47928 161 aa12.01□□□□□ -0.49
CAPN3-216ENST00000567071 GRB10Q13322 594 aa12.01□□□□□ -0.49
CAPN3-216ENST00000567071 ZYXQ15942 572 aaKnown RBP12.01□□□□□ -0.49
CAPN3-216ENST00000567071 KCNA10Q16322 511 aa12.01□□□□□ -0.49
CAPN3-216ENST00000567071 TWISTNBQ3B726 338 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms