RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 LAMA3Q16787 3333 aa19.73■□□□□ 0.75
CLN6-208ENST00000567060 TSPY2A6NKD2 308 aa19.72■□□□□ 0.75
CLN6-208ENST00000567060 C19orf81C9J6K1 198 aa19.72■□□□□ 0.75
CLN6-208ENST00000567060 SMIM22K7EJ46 135 aa19.72■□□□□ 0.75
CLN6-208ENST00000567060 SLC27A2O14975 620 aa19.72■□□□□ 0.75
CLN6-208ENST00000567060 AKR1B1P15121 316 aa19.72■□□□□ 0.75
CLN6-208ENST00000567060 HSPA4P34932 840 aa19.72■□□□□ 0.75
CLN6-208ENST00000567060 PRMT2P55345 433 aa19.72■□□□□ 0.75
CLN6-208ENST00000567060 C8orf34Q49A92 452 aa19.72■□□□□ 0.75
CLN6-208ENST00000567060 NCOA7Q8NI08 942 aa19.72■□□□□ 0.75
CLN6-208ENST00000567060 KCNB2Q92953 911 aa19.72■□□□□ 0.75
CLN6-208ENST00000567060 TRIM47Q96LD4 638 aa19.72■□□□□ 0.75
CLN6-208ENST00000567060 MTA3Q9BTC8 594 aa19.72■□□□□ 0.75
CLN6-208ENST00000567060 CPA4Q9UI42 421 aa19.72■□□□□ 0.75
CLN6-208ENST00000567060 COL6A3P12111 3177 aa19.72■□□□□ 0.75
CLN6-208ENST00000567060 PHIPQ8WWQ0 1821 aa19.72■□□□□ 0.75
CLN6-208ENST00000567060 USP14P54578 494 aa19.71■□□□□ 0.75
CLN6-208ENST00000567060 TFAP4Q01664 338 aa19.71■□□□□ 0.75
CLN6-208ENST00000567060 RAB3GAP1Q15042 981 aa19.71■□□□□ 0.75
CLN6-208ENST00000567060 UBE2Q1Q7Z7E8 422 aa19.71■□□□□ 0.75
CLN6-208ENST00000567060 RALYLQ86SE5 291 aaKnown RBP19.71■□□□□ 0.75
CLN6-208ENST00000567060 IQCA1Q86XH1 822 aa19.71■□□□□ 0.75
CLN6-208ENST00000567060 USP26Q9BXU7 913 aa19.71■□□□□ 0.75
CLN6-208ENST00000567060 ARHGEF10LQ9HCE6 1279 aa19.71■□□□□ 0.75
CLN6-208ENST00000567060 TOMM22Q9NS69 142 aa19.71■□□□□ 0.75
CLN6-208ENST00000567060 NYAP2Q9P242 653 aa19.71■□□□□ 0.75
CLN6-208ENST00000567060 RBM27Q9P2N5 1060 aaKnown RBP19.71■□□□□ 0.75
CLN6-208ENST00000567060 SRRDQ9UH36 339 aa19.71■□□□□ 0.75
CLN6-208ENST00000567060 IGKV6D-41A0A0C4DH26 115 aa19.7■□□□□ 0.74
CLN6-208ENST00000567060 USP17L10C9JJH3 530 aa19.7■□□□□ 0.74
CLN6-208ENST00000567060 RANBP6O60518 1105 aaKnown RBP19.7■□□□□ 0.74
CLN6-208ENST00000567060 PRDM1O75626 825 aa19.7■□□□□ 0.74
CLN6-208ENST00000567060 GUCY1A2P33402 732 aa19.7■□□□□ 0.74
CLN6-208ENST00000567060 PSMC4P43686 418 aa19.7■□□□□ 0.74
CLN6-208ENST00000567060 ICA1Q05084 483 aa19.7■□□□□ 0.74
CLN6-208ENST00000567060 SEPT2Q15019 361 aa19.7■□□□□ 0.74
CLN6-208ENST00000567060 SH3D19Q5HYK7 790 aa19.7■□□□□ 0.74
CLN6-208ENST00000567060 FASTKD5Q7L8L6 764 aaKnown RBP19.7■□□□□ 0.74
CLN6-208ENST00000567060 TTC14Q96N46 770 aa19.7■□□□□ 0.74
CLN6-208ENST00000567060 E7EWF7 191 aa19.69■□□□□ 0.74
CLN6-208ENST00000567060 HMGB1P09429 215 aaKnown RBP19.69■□□□□ 0.74
CLN6-208ENST00000567060 OSBPP22059 807 aa19.69■□□□□ 0.74
CLN6-208ENST00000567060 NOVP48745 357 aa19.69■□□□□ 0.74
CLN6-208ENST00000567060 BACE1P56817 501 aa19.69■□□□□ 0.74
CLN6-208ENST00000567060 JAG1P78504 1218 aa19.69■□□□□ 0.74
CLN6-208ENST00000567060 MOGSQ13724 837 aa19.69■□□□□ 0.74
CLN6-208ENST00000567060 STK11IPQ8N1F8 1099 aa19.69■□□□□ 0.74
CLN6-208ENST00000567060 DPF3Q92784 378 aa19.69■□□□□ 0.74
CLN6-208ENST00000567060 KIAA1683Q9H0B3 1180 aa19.69■□□□□ 0.74
CLN6-208ENST00000567060 PRO3102Q9H379 93 aa19.69■□□□□ 0.74
CLN6-208ENST00000567060 NEDD4P46934 1319 aa19.69■□□□□ 0.74
CLN6-208ENST00000567060 ADGRA2Q96PE1 1338 aa19.69■□□□□ 0.74
CLN6-208ENST00000567060 A0A0G2JLL6 359 aaPredicted RBP19.68■□□□□ 0.74
CLN6-208ENST00000567060 TTLL1O95922 423 aa19.68■□□□□ 0.74
CLN6-208ENST00000567060 SPP2Q13103 211 aa19.68■□□□□ 0.74
CLN6-208ENST00000567060 RRP12Q5JTH9 1297 aaKnown RBP19.68■□□□□ 0.74
CLN6-208ENST00000567060 PRRT2Q7Z6L0 340 aaPredicted RBP19.68■□□□□ 0.74
CLN6-208ENST00000567060 ANKRD23Q86SG2 305 aa19.68■□□□□ 0.74
CLN6-208ENST00000567060 PROCA1Q8NCQ7 364 aaPredicted RBP19.68■□□□□ 0.74
CLN6-208ENST00000567060 MKL1Q969V6 931 aa19.68■□□□□ 0.74
CLN6-208ENST00000567060 C12orf42Q96LP6 360 aa19.68■□□□□ 0.74
CLN6-208ENST00000567060 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.68■□□□□ 0.74
CLN6-208ENST00000567060 MTMR4Q9NYA4 1195 aa19.68■□□□□ 0.74
CLN6-208ENST00000567060 TACC3Q9Y6A5 838 aa19.68■□□□□ 0.74
CLN6-208ENST00000567060 PTPRFP10586 1907 aa19.68■□□□□ 0.74
CLN6-208ENST00000567060 PDHXO00330 501 aa19.67■□□□□ 0.74
CLN6-208ENST00000567060 GJA8P48165 433 aa19.67■□□□□ 0.74
CLN6-208ENST00000567060 ANAPC15P60006 121 aa19.67■□□□□ 0.74
CLN6-208ENST00000567060 USP17L2Q6R6M4 530 aa19.67■□□□□ 0.74
CLN6-208ENST00000567060 DGKHQ86XP1 1220 aa19.67■□□□□ 0.74
CLN6-208ENST00000567060 LPAR1Q92633 364 aa19.67■□□□□ 0.74
CLN6-208ENST00000567060 SLC45A1Q9Y2W3 748 aa19.67■□□□□ 0.74
CLN6-208ENST00000567060 TMX2Q9Y320 296 aa19.67■□□□□ 0.74
CLN6-208ENST00000567060 WDR19Q8NEZ3 1342 aa19.67■□□□□ 0.74
CLN6-208ENST00000567060 B4E1Z4 1266 aa19.66■□□□□ 0.74
CLN6-208ENST00000567060 KDM4AO75164 1064 aa19.66■□□□□ 0.74
CLN6-208ENST00000567060 GJB1P08034 283 aa19.66■□□□□ 0.74
CLN6-208ENST00000567060 PSMA5P28066 241 aa19.66■□□□□ 0.74
CLN6-208ENST00000567060 GRK4P32298 578 aa19.66■□□□□ 0.74
CLN6-208ENST00000567060 SART3Q15020 963 aaKnown RBP19.66■□□□□ 0.74
CLN6-208ENST00000567060 FAM47AQ5JRC9 791 aa19.66■□□□□ 0.74
CLN6-208ENST00000567060 CEP95Q96GE4 821 aa19.66■□□□□ 0.74
CLN6-208ENST00000567060 FEZ1Q99689 392 aa19.66■□□□□ 0.74
CLN6-208ENST00000567060 UPF2Q9HAU5 1272 aaKnown RBP19.66■□□□□ 0.74
CLN6-208ENST00000567060 TMOD4Q9NZQ9 345 aa19.66■□□□□ 0.74
CLN6-208ENST00000567060 ZSWIM5Q9P217 1185 aa19.66■□□□□ 0.74
CLN6-208ENST00000567060 TRIM75PA6NK02 468 aa19.65■□□□□ 0.74
CLN6-208ENST00000567060 FMNL1O95466 1100 aaPredicted RBP19.65■□□□□ 0.74
CLN6-208ENST00000567060 CCL5P13501 91 aa19.65■□□□□ 0.74
CLN6-208ENST00000567060 EEF2P13639 858 aaKnown RBP19.65■□□□□ 0.74
CLN6-208ENST00000567060 PABPC4Q13310 644 aaKnown RBP eCLIP19.65■□□□□ 0.742e-12■□□□□ 10.6
CLN6-208ENST00000567060 RAET1EQ8TD07 263 aa19.65■□□□□ 0.74
CLN6-208ENST00000567060 ANKS1AQ92625 1134 aa19.65■□□□□ 0.74
CLN6-208ENST00000567060 IL17RAQ96F46 866 aa19.65■□□□□ 0.74
CLN6-208ENST00000567060 UBAC1Q9BSL1 405 aa19.65■□□□□ 0.74
CLN6-208ENST00000567060 GOPCQ9HD26 462 aa19.65■□□□□ 0.74
CLN6-208ENST00000567060 INCENPQ9NQS7 918 aa19.65■□□□□ 0.74
CLN6-208ENST00000567060 ERICH2A1L162 156 aa19.64■□□□□ 0.73
CLN6-208ENST00000567060 HOXD10P28358 340 aa19.64■□□□□ 0.73
CLN6-208ENST00000567060 MCM5P33992 734 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms