RNA–Protein interactions for RNA: ENST00000566938.5

BBS4-212, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 4

Gene BBS4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-212ENST00000566938 ARHGAP39Q9C0H5 1083 aa7.51□□□□□ -1.21
BBS4-212ENST00000566938 HMX1Q9NP08 348 aaPredicted RBP7.51□□□□□ -1.21
BBS4-212ENST00000566938 USP40Q9NVE5 1235 aa7.51□□□□□ -1.21
BBS4-212ENST00000566938 LRRFIP2Q9Y608 721 aaKnown RBP7.51□□□□□ -1.21
BBS4-212ENST00000566938 J3QL48 77 aa7.5□□□□□ -1.21
BBS4-212ENST00000566938 PDHXO00330 501 aa7.5□□□□□ -1.21
BBS4-212ENST00000566938 BCRP11274 1271 aa7.5□□□□□ -1.21
BBS4-212ENST00000566938 ADORA1P30542 326 aa7.5□□□□□ -1.21
BBS4-212ENST00000566938 RARSP54136 660 aaKnown RBP7.5□□□□□ -1.21
BBS4-212ENST00000566938 TCP10Q12799 353 aa7.5□□□□□ -1.21
BBS4-212ENST00000566938 RASGRF1Q13972 1273 aa7.5□□□□□ -1.21
BBS4-212ENST00000566938 KIF22Q14807 665 aa7.5□□□□□ -1.21
BBS4-212ENST00000566938 HABP4Q5JVS0 413 aaKnown RBP7.5□□□□□ -1.21
BBS4-212ENST00000566938 SH3BP5LQ7L8J4 393 aa7.5□□□□□ -1.21
BBS4-212ENST00000566938 UBE2Q1Q7Z7E8 422 aa7.5□□□□□ -1.21
BBS4-212ENST00000566938 TRIM47Q96LD4 638 aa7.5□□□□□ -1.21
BBS4-212ENST00000566938 MEIS3Q99687 375 aa7.5□□□□□ -1.21
BBS4-212ENST00000566938 SIL1Q9H173 461 aa7.5□□□□□ -1.21
BBS4-212ENST00000566938 SRRDQ9UH36 339 aa7.5□□□□□ -1.21
BBS4-212ENST00000566938 PA2G4Q9UQ80 394 aaKnown RBP7.5□□□□□ -1.21
BBS4-212ENST00000566938 SLC45A1Q9Y2W3 748 aa7.5□□□□□ -1.21
BBS4-212ENST00000566938 AFG3L2Q9Y4W6 797 aa7.5□□□□□ -1.21
BBS4-212ENST00000566938 GPR75-ASB3A0A0A6YYF3 556 aa7.49□□□□□ -1.21
BBS4-212ENST00000566938 A0A0G2JLL6 359 aaPredicted RBP7.49□□□□□ -1.21
BBS4-212ENST00000566938 CTNND1O60716 968 aaKnown RBP7.49□□□□□ -1.21
BBS4-212ENST00000566938 MAP4K4O95819 1239 aaPredicted RBP7.49□□□□□ -1.21
BBS4-212ENST00000566938 PTPRAP18433 802 aa7.49□□□□□ -1.21
BBS4-212ENST00000566938 HOXD10P28358 340 aa7.49□□□□□ -1.21
BBS4-212ENST00000566938 PSMC4P43686 418 aa7.49□□□□□ -1.21
BBS4-212ENST00000566938 RGS3P49796 1198 aa7.49□□□□□ -1.21
BBS4-212ENST00000566938 RHBDL3P58872 404 aa7.49□□□□□ -1.21
BBS4-212ENST00000566938 TIMM10P62072 90 aa7.49□□□□□ -1.21
BBS4-212ENST00000566938 PTK2Q05397 1052 aa7.49□□□□□ -1.21
BBS4-212ENST00000566938 PDXDC2PQ6P474 469 aa7.49□□□□□ -1.21
BBS4-212ENST00000566938 PRRT2Q7Z6L0 340 aaPredicted RBP7.49□□□□□ -1.21
BBS4-212ENST00000566938 ZBTB33Q86T24 672 aa7.49□□□□□ -1.21
BBS4-212ENST00000566938 SCYL3Q8IZE3 742 aa7.49□□□□□ -1.21
BBS4-212ENST00000566938 EPS8L1Q8TE68 723 aa7.49□□□□□ -1.21
BBS4-212ENST00000566938 SH3TC2Q8TF17 1288 aa7.49□□□□□ -1.21
BBS4-212ENST00000566938 ZNF384Q8TF68 577 aa7.49□□□□□ -1.21
BBS4-212ENST00000566938 PARK7Q99497 189 aaKnown RBP7.49□□□□□ -1.21
BBS4-212ENST00000566938 PRM3Q9NNZ6 103 aa7.49□□□□□ -1.21
BBS4-212ENST00000566938 CPA4Q9UI42 421 aa7.49□□□□□ -1.21
BBS4-212ENST00000566938 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.49□□□□□ -1.21
BBS4-212ENST00000566938 A0A1B0GUL7 405 aa7.48□□□□□ -1.21
BBS4-212ENST00000566938 DDTLA6NHG4 134 aaPredicted RBP7.48□□□□□ -1.21
BBS4-212ENST00000566938 CCER2I3L3R5 266 aa7.48□□□□□ -1.21
BBS4-212ENST00000566938 GNAI3P08754 354 aa7.48□□□□□ -1.21
BBS4-212ENST00000566938 CAPN2P17655 700 aa7.48□□□□□ -1.21
BBS4-212ENST00000566938 MVPQ14764 893 aaKnown RBP7.48□□□□□ -1.21
BBS4-212ENST00000566938 SLC4A8Q2Y0W8 1093 aa7.48□□□□□ -1.21
BBS4-212ENST00000566938 SPTY2D1Q68D10 685 aaPredicted RBP7.48□□□□□ -1.21
BBS4-212ENST00000566938 FASTKD5Q7L8L6 764 aaKnown RBP7.48□□□□□ -1.21
BBS4-212ENST00000566938 SHISA4Q96DD7 197 aa7.48□□□□□ -1.21
BBS4-212ENST00000566938 XAGE2Q96GT9 111 aa7.48□□□□□ -1.21
BBS4-212ENST00000566938 DDX4Q9NQI0 724 aaKnown RBP7.48□□□□□ -1.21
BBS4-212ENST00000566938 AKAP2Q9Y2D5 859 aa7.48□□□□□ -1.21
BBS4-212ENST00000566938 ZHX2Q9Y6X8 837 aa7.48□□□□□ -1.21
BBS4-212ENST00000566938 MROH7-TTC4A0A0A0MT08 1334 aa7.48□□□□□ -1.21
BBS4-212ENST00000566938 SIAH2O43255 324 aa7.47□□□□□ -1.21
BBS4-212ENST00000566938 SRGAP3O43295 1099 aa7.47□□□□□ -1.21
BBS4-212ENST00000566938 IGSF3O75054 1194 aa7.47□□□□□ -1.21
BBS4-212ENST00000566938 GJB1P08034 283 aa7.47□□□□□ -1.21
BBS4-212ENST00000566938 CYP2C8P10632 490 aa7.47□□□□□ -1.21
BBS4-212ENST00000566938 SMPD1P17405 629 aa7.47□□□□□ -1.21
BBS4-212ENST00000566938 ARID4AP29374 1257 aaPredicted RBP7.47□□□□□ -1.21
BBS4-212ENST00000566938 GRK4P32298 578 aa7.47□□□□□ -1.21
BBS4-212ENST00000566938 BTDP43251 543 aa7.47□□□□□ -1.21
BBS4-212ENST00000566938 GJA8P48165 433 aa7.47□□□□□ -1.21
BBS4-212ENST00000566938 FXR1P51114 621 aaKnown RBP eCLIP7.47□□□□□ -1.21
BBS4-212ENST00000566938 MECOMQ03112 1051 aa7.47□□□□□ -1.21
BBS4-212ENST00000566938 TFCP2Q12800 502 aa7.47□□□□□ -1.21
BBS4-212ENST00000566938 MTFR1Q15390 333 aa7.47□□□□□ -1.21
BBS4-212ENST00000566938 NSUN4Q96CB9 384 aaKnown RBP7.47□□□□□ -1.21
BBS4-212ENST00000566938 PICK1Q9NRD5 415 aa7.47□□□□□ -1.21
BBS4-212ENST00000566938 HMG20BQ9P0W2 317 aa7.47□□□□□ -1.21
BBS4-212ENST00000566938 COL2A1P02458 1487 aaPredicted RBP7.47□□□□□ -1.21
BBS4-212ENST00000566938 RANBP2P49792 3224 aaKnown RBP7.47□□□□□ -1.21
BBS4-212ENST00000566938 SZT2Q5T011 3432 aa7.47□□□□□ -1.21
BBS4-212ENST00000566938 AXIN1O15169 862 aa7.46□□□□□ -1.22
BBS4-212ENST00000566938 IPO8O15397 1037 aaKnown RBP7.46□□□□□ -1.22
BBS4-212ENST00000566938 SLURP2P0DP57 97 aa7.46□□□□□ -1.22
BBS4-212ENST00000566938 TRIM27P14373 513 aa7.46□□□□□ -1.22
BBS4-212ENST00000566938 FCGRTP55899 365 aa7.46□□□□□ -1.22
BBS4-212ENST00000566938 PRKCZQ05513 592 aa7.46□□□□□ -1.22
BBS4-212ENST00000566938 IRF5Q13568 498 aa7.46□□□□□ -1.22
BBS4-212ENST00000566938 TMEM132AQ24JP5 1023 aa7.46□□□□□ -1.22
BBS4-212ENST00000566938 ERICH6Q7L0X2 663 aa7.46□□□□□ -1.22
BBS4-212ENST00000566938 VASH1Q7L8A9 365 aaPredicted RBP7.46□□□□□ -1.22
BBS4-212ENST00000566938 METTL16Q86W50 562 aaKnown RBP7.46□□□□□ -1.22
BBS4-212ENST00000566938 DZIP1Q86YF9 867 aaKnown RBP7.46□□□□□ -1.22
BBS4-212ENST00000566938 SPATA5Q8NB90 893 aa7.46□□□□□ -1.22
BBS4-212ENST00000566938 RAET1EQ8TD07 263 aa7.46□□□□□ -1.22
BBS4-212ENST00000566938 OSBPL5Q9H0X9 879 aaPredicted RBP7.46□□□□□ -1.22
BBS4-212ENST00000566938 GPR108Q9NPR9 543 aa7.46□□□□□ -1.22
BBS4-212ENST00000566938 SNRKQ9NRH2 765 aa7.46□□□□□ -1.22
BBS4-212ENST00000566938 ABCF2Q9UG63 623 aa7.46□□□□□ -1.22
BBS4-212ENST00000566938 AGTPBP1Q9UPW5 1226 aa7.46□□□□□ -1.22
BBS4-212ENST00000566938 MYPNQ86TC9 1320 aa7.46□□□□□ -1.22
BBS4-212ENST00000566938 ZSWIM8A7E2V4 1837 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms