RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 PPP6R2O75170 966 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 DMTNQ08495 405 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 SLFNL1Q499Z3 407 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 TTC38Q5R3I4 469 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 SMARCC2Q8TAQ2 1214 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 SELENOSQ9BQE4 189 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 FAM184BQ9ULE4 1060 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 TNNQ9UQP3 1299 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 MROH5Q6ZUA9 1318 aa4.84□□□□□ -1.63
LPCAT2-208ENST00000566915 CCDC151A5D8V7 595 aa4.84□□□□□ -1.64
LPCAT2-208ENST00000566915 NOL3O60936 208 aaKnown RBP4.84□□□□□ -1.64
LPCAT2-208ENST00000566915 SETSIPP0DME0 302 aa4.84□□□□□ -1.64
LPCAT2-208ENST00000566915 TRAPPC10P48553 1259 aa4.84□□□□□ -1.64
LPCAT2-208ENST00000566915 ARHGEF6Q15052 776 aa4.84□□□□□ -1.64
LPCAT2-208ENST00000566915 PPP1R7Q15435 360 aa4.84□□□□□ -1.64
LPCAT2-208ENST00000566915 ASIC2Q16515 512 aa4.84□□□□□ -1.64
LPCAT2-208ENST00000566915 MAP3K21Q5TCX8 1036 aa4.84□□□□□ -1.64
LPCAT2-208ENST00000566915 KRT40Q6A162 431 aa4.84□□□□□ -1.64
LPCAT2-208ENST00000566915 PHLDB2Q86SQ0 1253 aa4.84□□□□□ -1.64
LPCAT2-208ENST00000566915 IWS1Q96ST2 819 aa4.84□□□□□ -1.64
LPCAT2-208ENST00000566915 HOMER3Q9NSC5 361 aa4.84□□□□□ -1.64
LPCAT2-208ENST00000566915 RTEL1Q9NZ71 1219 aa4.84□□□□□ -1.64
LPCAT2-208ENST00000566915 HYOU1Q9Y4L1 999 aa4.84□□□□□ -1.64
LPCAT2-208ENST00000566915 MAST3O60307 1309 aa4.84□□□□□ -1.64
LPCAT2-208ENST00000566915 LAD1O00515 517 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 BUB1BO60566 1050 aaPredicted RBP4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 PARP1P09874 1014 aaKnown RBP4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 MXRA7P84157 204 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 PDE4DQ08499 809 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 BBOF1Q8ND07 529 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 IFT81Q8WYA0 676 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 P3H4Q92791 437 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 EXOC4Q96A65 974 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 HOOK2Q96ED9 719 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 VCX3BQ9H321 246 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 PNMA2Q9UL42 364 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 PRR36Q9H6K5 1346 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 KDM3AQ9Y4C1 1321 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 KDRP35968 1356 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 TRAF5O00463 557 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 SPATA1Q5VX52 437 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 PPP1R2P3Q6NXS1 205 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 ARHGAP27Q6ZUM4 889 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 LPIN2Q92539 896 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 CAPZA3Q96KX2 299 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 GSDMAQ96QA5 445 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 RAB3IPQ96QF0 476 aaPredicted RBP4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 XPO4Q9C0E2 1151 aaKnown RBP4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 POLR3EQ9NVU0 708 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 PA2G4Q9UQ80 394 aaKnown RBP4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 BZW2Q9Y6E2 419 aaKnown RBP4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 AHDC1Q5TGY3 1603 aaPredicted RBP4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 RNF40O75150 1001 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 LUC7L3O95232 432 aaKnown RBP4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 TNFAIP3P21580 790 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 GPTP24298 496 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 STX17P56962 302 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 NONOQ15233 471 aaKnown RBP eCLIP4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 RPS6KA1Q15418 735 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 DALRD3Q5D0E6 543 aaKnown RBP4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 LIN9Q5TKA1 542 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 GSTA5Q7RTV2 222 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 UBLCP1Q8WVY7 318 aaPredicted RBP4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 CDC23Q9UJX2 597 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 VWA3AA6NCI4 1184 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 IRS4O14654 1257 aaPredicted RBP4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 POLR2DO15514 142 aaKnown RBP4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 BCRP11274 1271 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 ZNF790Q6PG37 636 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 POTEAQ6S8J7 498 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 SARM1Q6SZW1 724 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 DZIP3Q86Y13 1208 aaKnown RBP4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 EFCAB13Q8IY85 973 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 DRC1Q96MC2 740 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 SYNCQ9H7C4 482 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 RNF216Q9NWF9 866 aaPredicted RBP4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 CTNND2Q9UQB3 1225 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 BCS1LQ9Y276 419 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 PPP2R2CQ9Y2T4 447 aa4.83□□□□□ -1.64
LPCAT2-208ENST00000566915 EVI5O60447 810 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 PDE8AO60658 829 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 GAS8O95995 478 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 MAN1A1P33908 653 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 MCM7P33993 719 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 GCKRQ14397 625 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 INF2Q27J81 1249 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 SH2D4BQ5SQS7 431 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 SFMBT2Q5VUG0 894 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 CDC37L1Q7L3B6 337 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 SRGAP1Q7Z6B7 1085 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 CNPY4Q8N129 248 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 MAGEB6Q8N7X4 407 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 MAP4K1Q92918 833 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 BICD1Q96G01 975 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 CALR3Q96L12 384 aaKnown RBP4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 TXNDC16Q9P2K2 825 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 ATF5Q9Y2D1 282 aaPredicted RBP4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 PLEKHG2Q9H7P9 1386 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 GPAA1O43292 621 aa4.82□□□□□ -1.64
LPCAT2-208ENST00000566915 GTPBP6O43824 516 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms