RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-215ENST00000566682 CTNNA3Q9UI47 895 aa16.23■□□□□ 0.19
SPG7-215ENST00000566682 PNMA3Q9UL41 463 aa16.23■□□□□ 0.19
SPG7-215ENST00000566682 ADGRA2Q96PE1 1338 aa16.22■□□□□ 0.19
SPG7-215ENST00000566682 TSPY2A6NKD2 308 aa16.22■□□□□ 0.19
SPG7-215ENST00000566682 RANBP6O60518 1105 aaKnown RBP16.22■□□□□ 0.19
SPG7-215ENST00000566682 IMMTQ16891 758 aaKnown RBP16.22■□□□□ 0.19
SPG7-215ENST00000566682 RRP12Q5JTH9 1297 aaKnown RBP16.22■□□□□ 0.19
SPG7-215ENST00000566682 MFSD6Q6ZSS7 791 aa16.22■□□□□ 0.19
SPG7-215ENST00000566682 TBC1D10CQ8IV04 446 aa16.22■□□□□ 0.19
SPG7-215ENST00000566682 STAG1Q8WVM7 1258 aa16.22■□□□□ 0.19
SPG7-215ENST00000566682 CEP95Q96GE4 821 aa16.22■□□□□ 0.19
SPG7-215ENST00000566682 ESYT1Q9BSJ8 1104 aa16.22■□□□□ 0.19
SPG7-215ENST00000566682 ASCC2Q9H1I8 757 aaPredicted RBP16.22■□□□□ 0.19
SPG7-215ENST00000566682 SH2D4AQ9H788 454 aa16.22■□□□□ 0.19
SPG7-215ENST00000566682 NYAP2Q9P242 653 aa16.22■□□□□ 0.19
SPG7-215ENST00000566682 PCP11498 1178 aaKnown RBP16.21■□□□□ 0.19
SPG7-215ENST00000566682 VCAM1P19320 739 aa16.21■□□□□ 0.19
SPG7-215ENST00000566682 KIAA1755Q5JYT7 1200 aa16.21■□□□□ 0.19
SPG7-215ENST00000566682 SMCR8Q8TEV9 937 aaPredicted RBP16.21■□□□□ 0.19
SPG7-215ENST00000566682 VCPKMTQ9H867 229 aa16.21■□□□□ 0.19
SPG7-215ENST00000566682 MTMR4Q9NYA4 1195 aa16.21■□□□□ 0.19
SPG7-215ENST00000566682 CLIP2Q9UDT6 1046 aa16.21■□□□□ 0.19
SPG7-215ENST00000566682 PLIN4Q96Q06 1357 aa16.21■□□□□ 0.19
SPG7-215ENST00000566682 USP17L15C9J2P7 530 aa16.2■□□□□ 0.18
SPG7-215ENST00000566682 USP17L13C9JLJ4 530 aa16.2■□□□□ 0.18
SPG7-215ENST00000566682 USP17L11C9JVI0 530 aa16.2■□□□□ 0.18
SPG7-215ENST00000566682 USP17L18D6R9N7 530 aa16.2■□□□□ 0.18
SPG7-215ENST00000566682 USP17L22D6RA61 530 aa16.2■□□□□ 0.18
SPG7-215ENST00000566682 USP17L17D6RBQ6 530 aa16.2■□□□□ 0.18
SPG7-215ENST00000566682 USP17L19D6RCP7 530 aa16.2■□□□□ 0.18
SPG7-215ENST00000566682 USP17L20D6RJB6 530 aa16.2■□□□□ 0.18
SPG7-215ENST00000566682 CDC45O75419 566 aa16.2■□□□□ 0.18
SPG7-215ENST00000566682 IRX3P78415 501 aaPredicted RBP16.2■□□□□ 0.18
SPG7-215ENST00000566682 USP17L24Q0WX57 530 aa16.2■□□□□ 0.18
SPG7-215ENST00000566682 CATSPERGQ6ZRH7 1159 aa16.2■□□□□ 0.18
SPG7-215ENST00000566682 KIAA1211Q6ZU35 1233 aa16.2■□□□□ 0.18
SPG7-215ENST00000566682 MAP4K1Q92918 833 aa16.2■□□□□ 0.18
SPG7-215ENST00000566682 P2RX7Q99572 595 aaKnown RBP16.2■□□□□ 0.18
SPG7-215ENST00000566682 RNF41Q9H4P4 317 aaPredicted RBP16.2■□□□□ 0.18
SPG7-215ENST00000566682 IL17RBQ9NRM6 502 aa16.2■□□□□ 0.18
SPG7-215ENST00000566682 TTLL1O95922 423 aa16.19■□□□□ 0.18
SPG7-215ENST00000566682 BCRP11274 1271 aa16.19■□□□□ 0.18
SPG7-215ENST00000566682 CASC1Q6TDU7 716 aa16.19■□□□□ 0.18
SPG7-215ENST00000566682 SPICE1Q8N0Z3 855 aa16.19■□□□□ 0.18
SPG7-215ENST00000566682 NKX2-3Q8TAU0 364 aa16.19■□□□□ 0.18
SPG7-215ENST00000566682 CD99L2Q8TCZ2 262 aa16.19■□□□□ 0.18
SPG7-215ENST00000566682 LPAR1Q92633 364 aa16.19■□□□□ 0.18
SPG7-215ENST00000566682 MKL1Q969V6 931 aa16.19■□□□□ 0.18
SPG7-215ENST00000566682 ERO1AQ96HE7 468 aa16.19■□□□□ 0.18
SPG7-215ENST00000566682 RPAP3Q9H6T3 665 aaPredicted RBP16.19■□□□□ 0.18
SPG7-215ENST00000566682 GOPCQ9HD26 462 aa16.19■□□□□ 0.18
SPG7-215ENST00000566682 NEDD4P46934 1319 aa16.19■□□□□ 0.18
SPG7-215ENST00000566682 ZSWIM8A7E2V4 1837 aa16.18■□□□□ 0.18
SPG7-215ENST00000566682 RAD21O60216 631 aa16.18■□□□□ 0.18
SPG7-215ENST00000566682 NMT2O60551 498 aa16.18■□□□□ 0.18
SPG7-215ENST00000566682 GCLCP48506 637 aaPredicted RBP16.18■□□□□ 0.18
SPG7-215ENST00000566682 CAP1Q01518 475 aa16.18■□□□□ 0.18
SPG7-215ENST00000566682 ANKRD13CQ8N6S4 541 aa16.18■□□□□ 0.18
SPG7-215ENST00000566682 LSG1Q9H089 658 aaKnown RBP16.18■□□□□ 0.18
SPG7-215ENST00000566682 MGAMO43451 1857 aa16.18■□□□□ 0.18
SPG7-215ENST00000566682 F5H6K3 240 aa16.17■□□□□ 0.18
SPG7-215ENST00000566682 ECM2O94769 699 aaPredicted RBP16.17■□□□□ 0.18
SPG7-215ENST00000566682 CYP21A2P08686 494 aa16.17■□□□□ 0.18
SPG7-215ENST00000566682 HERVK_113P62684 666 aa16.17■□□□□ 0.18
SPG7-215ENST00000566682 LACTBP83111 547 aaPredicted RBP16.17■□□□□ 0.18
SPG7-215ENST00000566682 KLRC3Q07444 240 aa16.17■□□□□ 0.18
SPG7-215ENST00000566682 CTU1Q7Z7A3 348 aaKnown RBP16.17■□□□□ 0.18
SPG7-215ENST00000566682 ESR2Q92731 530 aa16.17■□□□□ 0.18
SPG7-215ENST00000566682 TCP11L1Q9NUJ3 509 aa16.17■□□□□ 0.18
SPG7-215ENST00000566682 STX8Q9UNK0 236 aa16.17■□□□□ 0.18
SPG7-215ENST00000566682 RBM8AQ9Y5S9 174 aaKnown RBP16.17■□□□□ 0.18
SPG7-215ENST00000566682 RLFQ13129 1914 aa16.17■□□□□ 0.18
SPG7-215ENST00000566682 B4E1Z4 1266 aa16.16■□□□□ 0.18
SPG7-215ENST00000566682 WDR46O15213 610 aaKnown RBP16.16■□□□□ 0.18
SPG7-215ENST00000566682 KIF22Q14807 665 aa16.16■□□□□ 0.18
SPG7-215ENST00000566682 PPP4R3BQ5MIZ7 849 aa16.16■□□□□ 0.18
SPG7-215ENST00000566682 TNS4Q8IZW8 715 aa16.16■□□□□ 0.18
SPG7-215ENST00000566682 LRRC47Q8N1G4 583 aaKnown RBP16.16■□□□□ 0.18
SPG7-215ENST00000566682 TANGO6Q9C0B7 1094 aa16.16■□□□□ 0.18
SPG7-215ENST00000566682 ARHGAP39Q9C0H5 1083 aa16.16■□□□□ 0.18
SPG7-215ENST00000566682 ANO2Q9NQ90 1003 aa16.16■□□□□ 0.18
SPG7-215ENST00000566682 SYNPO2Q9UMS6 1093 aa16.16■□□□□ 0.18
SPG7-215ENST00000566682 TRIM17Q9Y577 477 aa16.16■□□□□ 0.18
SPG7-215ENST00000566682 PARP14Q460N5 1801 aa16.16■□□□□ 0.18
SPG7-215ENST00000566682 PEX10O60683 326 aa16.15■□□□□ 0.18
SPG7-215ENST00000566682 KDM4AO75164 1064 aa16.15■□□□□ 0.18
SPG7-215ENST00000566682 CTGFP29279 349 aa16.15■□□□□ 0.18
SPG7-215ENST00000566682 NOVP48745 357 aa16.15■□□□□ 0.18
SPG7-215ENST00000566682 COG2Q14746 738 aa16.15■□□□□ 0.18
SPG7-215ENST00000566682 FAM110CQ1W6H9 321 aa16.15■□□□□ 0.18
SPG7-215ENST00000566682 POTEEQ6S8J3 1075 aa16.15■□□□□ 0.18
SPG7-215ENST00000566682 OTOP1Q7RTM1 612 aa16.15■□□□□ 0.18
SPG7-215ENST00000566682 ZKSCAN3Q9BRR0 538 aa16.15■□□□□ 0.18
SPG7-215ENST00000566682 KRT23Q9C075 422 aa16.15■□□□□ 0.18
SPG7-215ENST00000566682 CNNM2Q9H8M5 875 aa16.15■□□□□ 0.18
SPG7-215ENST00000566682 EFCC1Q9HA90 598 aa16.15■□□□□ 0.18
SPG7-215ENST00000566682 ZSWIM5Q9P217 1185 aa16.15■□□□□ 0.18
SPG7-215ENST00000566682 RBPJLQ9UBG7 517 aa16.15■□□□□ 0.18
SPG7-215ENST00000566682 SPDYE16A6NNV3 312 aaPredicted RBP16.14■□□□□ 0.17
SPG7-215ENST00000566682 NDUFB10O96000 172 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms